RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 ANKRD1Q15327 319 aa5.71□□□□□ -1.5
LRCH3-214ENST00000473177 KIF4BQ2VIQ3 1234 aa5.71□□□□□ -1.5
LRCH3-214ENST00000473177 FOXD4L6Q3SYB3 417 aaPredicted RBP5.71□□□□□ -1.5
LRCH3-214ENST00000473177 FOXD4L3Q6VB84 417 aaPredicted RBP5.71□□□□□ -1.5
LRCH3-214ENST00000473177 HS2ST1Q7LGA3 356 aa5.71□□□□□ -1.5
LRCH3-214ENST00000473177 OTOP1Q7RTM1 612 aa5.71□□□□□ -1.5
LRCH3-214ENST00000473177 ERMP1Q7Z2K6 904 aa5.71□□□□□ -1.5
LRCH3-214ENST00000473177 ALYREFQ86V81 257 aaKnown RBP5.71□□□□□ -1.5
LRCH3-214ENST00000473177 DPF3Q92784 378 aa5.71□□□□□ -1.5
LRCH3-214ENST00000473177 RNF34Q969K3 372 aa5.71□□□□□ -1.5
LRCH3-214ENST00000473177 TMX3Q96JJ7 454 aa5.71□□□□□ -1.5
LRCH3-214ENST00000473177 RSRP1Q9BUV0 290 aa5.71□□□□□ -1.5
LRCH3-214ENST00000473177 STK31Q9BXU1 1019 aa5.71□□□□□ -1.5
LRCH3-214ENST00000473177 BABAM1Q9NWV8 329 aa5.71□□□□□ -1.5
LRCH3-214ENST00000473177 SAMM50Q9Y512 469 aa5.71□□□□□ -1.5
LRCH3-214ENST00000473177 FAM229AH3BQW9 127 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 ADAM11O75078 769 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 BMP6P22004 513 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 ARNTP27540 789 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 COL8A1P27658 744 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 HOXA10P31260 410 aaPredicted RBP5.7□□□□□ -1.5
LRCH3-214ENST00000473177 PRKAR2BP31323 418 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 NF2P35240 595 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 RPS26P62854 115 aaKnown RBP5.7□□□□□ -1.5
LRCH3-214ENST00000473177 HDLBPQ00341 1268 aaKnown RBP5.7□□□□□ -1.5
LRCH3-214ENST00000473177 PWP1Q13610 501 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 PLA2G4EQ3MJ16 856 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 IGF2-ASQ6U949 168 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 NBPF11Q86T75 865 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 SLC51AQ86UW1 340 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 METTL16Q86W50 562 aaKnown RBP5.7□□□□□ -1.5
LRCH3-214ENST00000473177 SULF2Q8IWU5 870 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 GPT2Q8TD30 523 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 DPF2Q92785 391 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 ERO1AQ96HE7 468 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 GPATCH3Q96I76 525 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 CRAMP1Q96RY5 1269 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 LRRCC1Q9C099 1032 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 SCAND2PQ9GZW5 306 aaPredicted RBP5.7□□□□□ -1.5
LRCH3-214ENST00000473177 GGT7Q9UJ14 662 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 LIMCH1Q9UPQ0 1083 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 PTPN22Q9Y2R2 807 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 ATP6V0A2Q9Y487 856 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 RIC1Q4ADV7 1423 aa5.7□□□□□ -1.5
LRCH3-214ENST00000473177 SMTNL1A8MU46 457 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 UBE2Q2LH0YL09 131 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 PSMD14O00487 310 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 CTAGE5O15320 804 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 ADCY5O95622 1261 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 GSTP1P09211 210 aaKnown RBP5.69□□□□□ -1.5
LRCH3-214ENST00000473177 HMOX1P09601 288 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 ZKSCAN1P17029 563 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-214ENST00000473177 CDK11BP21127 795 aaKnown RBP5.69□□□□□ -1.5
LRCH3-214ENST00000473177 RPS12P25398 132 aaKnown RBP5.69□□□□□ -1.5
LRCH3-214ENST00000473177 PSMA5P28066 241 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 TM4SF4P48230 202 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 LIG3P49916 1009 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 NLRP12P59046 1061 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 TUBB4BP68371 445 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 POU4F3Q15319 338 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 MTHFSDQ2M296 383 aaKnown RBP5.69□□□□□ -1.5
LRCH3-214ENST00000473177 SLC9C1Q4G0N8 1177 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 TEX35Q5T0J7 233 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 PCNX4Q63HM2 1172 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 SCARA3Q6AZY7 606 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 TTBK2Q6IQ55 1244 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 PDZD3Q86UT5 571 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 STK35Q8TDR2 534 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 ARMC5Q96C12 935 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 EMILIN2Q9BXX0 1053 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 NAT10Q9H0A0 1025 aaKnown RBP5.69□□□□□ -1.5
LRCH3-214ENST00000473177 KCNK4Q9NYG8 393 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 CALCOCO1Q9P1Z2 691 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 STAP2Q9UGK3 403 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 PRDM4Q9UKN5 801 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 CYP8B1Q9UNU6 501 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 SMC3Q9UQE7 1217 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 TNNQ9UQP3 1299 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.69□□□□□ -1.5
LRCH3-214ENST00000473177 CCDC171Q6TFL3 1326 aa5.69□□□□□ -1.5
LRCH3-214ENST00000473177 LOC100289279A0A1B0GTE1 492 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 BTBD11A6QL63 1104 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 YDJCA8MPS7 323 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 DDX3YO15523 660 aaKnown RBP5.68□□□□□ -1.5
LRCH3-214ENST00000473177 CTIFO43310 598 aaKnown RBP5.68□□□□□ -1.5
LRCH3-214ENST00000473177 ZSCAN22P10073 491 aaPredicted RBP5.68□□□□□ -1.5
LRCH3-214ENST00000473177 GPTP24298 496 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 MAOBP27338 520 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 PDE1AP54750 535 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 TPM4P67936 248 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 KRT85P78386 507 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 ZNF252P-AS1Q0IIN9 211 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 LRRC14Q15048 493 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 HLFQ16534 295 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 ANGEL2Q5VTE6 544 aaKnown RBP5.68□□□□□ -1.5
LRCH3-214ENST00000473177 ATL3Q6DD88 541 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 CEP85Q6P2H3 762 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 AGMOQ6ZNB7 445 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 MOB2Q70IA6 237 aa5.68□□□□□ -1.5
LRCH3-214ENST00000473177 TICAM2Q86XR7 235 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms