RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 CASTP20810 708 aaKnown RBP17.77■□□□□ 0.44
FDPS-208ENST00000470171 LRIT3Q3SXY7 679 aa17.77■□□□□ 0.44
FDPS-208ENST00000470171 SEPT14Q6ZU15 432 aa17.77■□□□□ 0.44
FDPS-208ENST00000470171 TDHQ8IZJ6 230 aa17.77■□□□□ 0.44
FDPS-208ENST00000470171 FAM177A1Q8N128 213 aaPredicted RBP17.77■□□□□ 0.44
FDPS-208ENST00000470171 BRPF3Q9ULD4 1205 aa17.77■□□□□ 0.44
FDPS-208ENST00000470171 NID2Q14112 1375 aa17.77■□□□□ 0.43
FDPS-208ENST00000470171 PLXNA1Q9UIW2 1896 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 SPDYE3A6NKU9 549 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 PPFIA4O75335 1185 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 HOXA13P31271 388 aaPredicted RBP17.76■□□□□ 0.43
FDPS-208ENST00000470171 ICAM3P32942 547 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 PURAQ00577 322 aaKnown RBP17.76■□□□□ 0.43
FDPS-208ENST00000470171 BEX3Q00994 111 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 FAAP100Q0VG06 881 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 NEDD9Q14511 834 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 DGKDQ16760 1214 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 PCNX4Q63HM2 1172 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 NFRKBQ6P4R8 1299 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 CXCL17Q6UXB2 119 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 NLRX1Q86UT6 975 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 FCHSD1Q86WN1 690 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 BRF1Q92994 677 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 KATNAL1Q9BW62 490 aa17.76■□□□□ 0.43
FDPS-208ENST00000470171 PRDM5Q9NQX1 630 aaPredicted RBP17.76■□□□□ 0.43
FDPS-208ENST00000470171 MEIS2O14770 477 aa17.75■□□□□ 0.43
FDPS-208ENST00000470171 TIMP1P01033 207 aa17.75■□□□□ 0.43
FDPS-208ENST00000470171 RXRAP19793 462 aa17.75■□□□□ 0.43
FDPS-208ENST00000470171 AKAP17AQ02040 695 aaKnown RBP17.75■□□□□ 0.43
FDPS-208ENST00000470171 FUT2Q10981 343 aa17.75■□□□□ 0.43
FDPS-208ENST00000470171 CPLX2Q6PUV4 134 aaKnown RBP17.75■□□□□ 0.43
FDPS-208ENST00000470171 FAM126BQ8IXS8 530 aa17.75■□□□□ 0.43
FDPS-208ENST00000470171 DHX37Q8IY37 1157 aaKnown RBP17.75■□□□□ 0.43
FDPS-208ENST00000470171 PPTC7Q8NI37 304 aa17.75■□□□□ 0.43
FDPS-208ENST00000470171 ZNF274Q96GC6 653 aaPredicted RBP17.75■□□□□ 0.43
FDPS-208ENST00000470171 INPP4AQ96PE3 977 aaPredicted RBP17.75■□□□□ 0.43
FDPS-208ENST00000470171 SENP7Q9BQF6 1050 aa17.75■□□□□ 0.43
FDPS-208ENST00000470171 ALDH8A1Q9H2A2 487 aaPredicted RBP17.75■□□□□ 0.43
FDPS-208ENST00000470171 FIBPO43427 364 aa17.74■□□□□ 0.43
FDPS-208ENST00000470171 MYCLP12524 364 aaPredicted RBP17.74■□□□□ 0.43
FDPS-208ENST00000470171 ANKRD1Q15327 319 aa17.74■□□□□ 0.43
FDPS-208ENST00000470171 HEATR3Q7Z4Q2 680 aa17.74■□□□□ 0.43
FDPS-208ENST00000470171 CCDC82Q8N4S0 544 aa17.74■□□□□ 0.43
FDPS-208ENST00000470171 IL27Q8NEV9 243 aa17.74■□□□□ 0.43
FDPS-208ENST00000470171 PIBF1Q8WXW3 757 aa17.74■□□□□ 0.43
FDPS-208ENST00000470171 BARHL2Q9NY43 387 aa17.74■□□□□ 0.43
FDPS-208ENST00000470171 TBX21Q9UL17 535 aa17.74■□□□□ 0.43
FDPS-208ENST00000470171 V9GY48 417 aaPredicted RBP17.74■□□□□ 0.43
FDPS-208ENST00000470171 CNTNAP5Q8WYK1 1306 aa17.73■□□□□ 0.43
FDPS-208ENST00000470171 TRIM43BA6NCK2 446 aa17.73■□□□□ 0.43
FDPS-208ENST00000470171 PRPF3O43395 683 aaKnown RBP17.73■□□□□ 0.43
FDPS-208ENST00000470171 CD4P01730 458 aa17.73■□□□□ 0.43
FDPS-208ENST00000470171 MYL3P08590 195 aa17.73■□□□□ 0.43
FDPS-208ENST00000470171 GNA11P29992 359 aa17.73■□□□□ 0.43
FDPS-208ENST00000470171 NAPAP54920 295 aa17.73■□□□□ 0.43
FDPS-208ENST00000470171 ARHGAP1Q07960 439 aa17.73■□□□□ 0.43
FDPS-208ENST00000470171 AP3B2Q13367 1082 aa17.73■□□□□ 0.43
FDPS-208ENST00000470171 CELF3Q5SZQ8 465 aaKnown RBP17.73■□□□□ 0.43
FDPS-208ENST00000470171 MFSD5Q6N075 450 aa17.73■□□□□ 0.43
FDPS-208ENST00000470171 SESTD1Q86VW0 696 aa17.73■□□□□ 0.43
FDPS-208ENST00000470171 TMEM199Q8N511 208 aa17.73■□□□□ 0.43
FDPS-208ENST00000470171 TRIM43Q96BQ3 446 aaPredicted RBP17.73■□□□□ 0.43
FDPS-208ENST00000470171 IL17RAQ96F46 866 aa17.73■□□□□ 0.43
FDPS-208ENST00000470171 TCEANC2Q96MN5 208 aa17.73■□□□□ 0.43
FDPS-208ENST00000470171 RNF26Q9BY78 433 aaPredicted RBP17.73■□□□□ 0.43
FDPS-208ENST00000470171 RIC8AQ9NPQ8 531 aa17.73■□□□□ 0.43
FDPS-208ENST00000470171 NAP1L2Q9ULW6 460 aaPredicted RBP17.73■□□□□ 0.43
FDPS-208ENST00000470171 ESYT2A0FGR8 921 aa17.72■□□□□ 0.43
FDPS-208ENST00000470171 SPATA31C2B4DYI2 1134 aa17.72■□□□□ 0.43
FDPS-208ENST00000470171 ARIH2O95376 493 aa17.72■□□□□ 0.43
FDPS-208ENST00000470171 SLC34A2O95436 690 aa17.72■□□□□ 0.43
FDPS-208ENST00000470171 HOXD8P13378 290 aaPredicted RBP17.72■□□□□ 0.43
FDPS-208ENST00000470171 FXR1P51114 621 aaKnown RBP eCLIP17.72■□□□□ 0.43
FDPS-208ENST00000470171 MDM2Q00987 491 aaPredicted RBP17.72■□□□□ 0.43
FDPS-208ENST00000470171 PFKFB3Q16875 520 aaPredicted RBP17.72■□□□□ 0.43
FDPS-208ENST00000470171 LY6KQ17RY6 165 aa17.72■□□□□ 0.43
FDPS-208ENST00000470171 MYSM1Q5VVJ2 828 aa17.72■□□□□ 0.43
FDPS-208ENST00000470171 USP17L6PQ6QN14 398 aa17.72■□□□□ 0.43
FDPS-208ENST00000470171 CMTR1Q8N1G2 835 aaKnown RBP17.72■□□□□ 0.43
FDPS-208ENST00000470171 BICD2Q8TD16 824 aa17.72■□□□□ 0.43
FDPS-208ENST00000470171 GPRASP2Q96D09 838 aa17.72■□□□□ 0.43
FDPS-208ENST00000470171 MLXIPQ9HAP2 919 aa17.72■□□□□ 0.43
FDPS-208ENST00000470171 FAM217BQ9NTX9 383 aaPredicted RBP17.72■□□□□ 0.43
FDPS-208ENST00000470171 DDX49Q9Y6V7 483 aaKnown RBP17.72■□□□□ 0.43
FDPS-208ENST00000470171 MMP3P08254 477 aa17.71■□□□□ 0.43
FDPS-208ENST00000470171 IFNAR1P17181 557 aa17.71■□□□□ 0.43
FDPS-208ENST00000470171 ADCY7P51828 1080 aa17.71■□□□□ 0.43
FDPS-208ENST00000470171 FPGSQ05932 587 aa17.71■□□□□ 0.43
FDPS-208ENST00000470171 APOBRQ0VD83 1088 aa17.71■□□□□ 0.43
FDPS-208ENST00000470171 PPIGQ13427 754 aaKnown RBP eCLIP17.71■□□□□ 0.434e-7■■□□□ 11.4
FDPS-208ENST00000470171 COL9A3Q14050 684 aaPredicted RBP17.71■□□□□ 0.43
FDPS-208ENST00000470171 TRIM22Q8IYM9 498 aa17.71■□□□□ 0.43
FDPS-208ENST00000470171 CCDC148Q8NFR7 591 aa17.71■□□□□ 0.43
FDPS-208ENST00000470171 AFG1LQ8WV93 481 aa17.71■□□□□ 0.43
FDPS-208ENST00000470171 BADQ92934 168 aa17.71■□□□□ 0.43
FDPS-208ENST00000470171 C6orf50Q9HD87 102 aa17.71■□□□□ 0.43
FDPS-208ENST00000470171 SH3GLB2Q9NR46 395 aa17.71■□□□□ 0.43
FDPS-208ENST00000470171 SMCO2A6NFE2 343 aa17.7■□□□□ 0.42
FDPS-208ENST00000470171 CDKL5O76039 1030 aa17.7■□□□□ 0.42
FDPS-208ENST00000470171 RGS20O76081 388 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms