RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 SP8Q8IXZ3 490 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 MTMR9Q96QG7 549 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 BCAS3Q9H6U6 928 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 MYO6Q9UM54 1294 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 PNMA6FA0A0J9YX94 578 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 ZRANB2O95218 330 aaKnown RBP eCLIP19.86■□□□□ 0.77
MCF2L-221ENST00000469415 ADRA2BP18089 450 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 CXCR5P32302 372 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 UBXN2AP68543 259 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 GABPAQ06546 454 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 ASPRV1Q53RT3 343 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 CAGE1Q8TC20 777 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 CCDC42Q96M95 316 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 TRERF1Q96PN7 1200 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 C7orf25Q9BPX7 421 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 GTPBP4Q9BZE4 634 aaKnown RBP19.86■□□□□ 0.77
MCF2L-221ENST00000469415 ANKZF1Q9H8Y5 726 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 SMARCAL1Q9NZC9 954 aa19.86■□□□□ 0.77
MCF2L-221ENST00000469415 BICDL2A1A5D9 508 aa19.85■□□□□ 0.77
MCF2L-221ENST00000469415 SRGNP10124 158 aa19.85■□□□□ 0.77
MCF2L-221ENST00000469415 OAS2P29728 719 aaKnown RBP19.85■□□□□ 0.77
MCF2L-221ENST00000469415 PTPROQ16827 1216 aa19.85■□□□□ 0.77
MCF2L-221ENST00000469415 PRR16Q569H4 304 aa19.85■□□□□ 0.77
MCF2L-221ENST00000469415 MIIPQ5JXC2 388 aa19.85■□□□□ 0.77
MCF2L-221ENST00000469415 RABGGTAQ92696 567 aa19.85■□□□□ 0.77
MCF2L-221ENST00000469415 HAS1Q92839 578 aa19.85■□□□□ 0.77
MCF2L-221ENST00000469415 CUL5Q93034 780 aa19.85■□□□□ 0.77
MCF2L-221ENST00000469415 TDRD3Q9H7E2 651 aaKnown RBP19.85■□□□□ 0.77
MCF2L-221ENST00000469415 DNAJC18Q9H819 358 aa19.85■□□□□ 0.77
MCF2L-221ENST00000469415 CAPN11Q9UMQ6 739 aa19.85■□□□□ 0.77
MCF2L-221ENST00000469415 GSPT2Q8IYD1 628 aaKnown RBP19.85■□□□□ 0.77
MCF2L-221ENST00000469415 FAM163AQ96GL9 167 aaPredicted RBP19.85■□□□□ 0.77
MCF2L-221ENST00000469415 CRAMP1Q96RY5 1269 aa19.85■□□□□ 0.77
MCF2L-221ENST00000469415 ABCB6Q9NP58 842 aa19.85■□□□□ 0.77
MCF2L-221ENST00000469415 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.85■□□□□ 0.77
MCF2L-221ENST00000469415 CASZ1Q86V15 1759 aa19.85■□□□□ 0.77
MCF2L-221ENST00000469415 VSNL1P62760 191 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 CCDC40Q4G0X9 1142 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 C15orf52Q6ZUT6 534 aaKnown RBP19.84■□□□□ 0.77
MCF2L-221ENST00000469415 TMC4Q7Z404 712 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 MLXIPQ9HAP2 919 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 RGL2O15211 777 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 TRIM14Q14142 442 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 SMC1AQ14683 1233 aaKnown RBP19.84■□□□□ 0.77
MCF2L-221ENST00000469415 CERKLQ49MI3 558 aaPredicted RBP19.84■□□□□ 0.77
MCF2L-221ENST00000469415 TDRD12Q587J7 1177 aaKnown RBP19.84■□□□□ 0.77
MCF2L-221ENST00000469415 HERC4Q5GLZ8 1057 aaPredicted RBP19.84■□□□□ 0.77
MCF2L-221ENST00000469415 DNAAF5Q86Y56 855 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 POTEFA5A3E0 1075 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 AKR1B10O60218 316 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 APBA3O96018 575 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 POTEIP0CG38 1075 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 HOXA10P31260 410 aaPredicted RBP19.84■□□□□ 0.77
MCF2L-221ENST00000469415 MRPL12P52815 198 aaKnown RBP19.84■□□□□ 0.77
MCF2L-221ENST00000469415 SLFN13Q68D06 897 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 POTEGQ6S5H5 508 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 POTEEQ6S8J3 1075 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 MMS19Q96T76 1030 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 NDST4Q9H3R1 872 aa19.84■□□□□ 0.77
MCF2L-221ENST00000469415 ZBTB5O15062 677 aa19.83■□□□□ 0.77
MCF2L-221ENST00000469415 CACNA2D4Q7Z3S7 1137 aa19.83■□□□□ 0.77
MCF2L-221ENST00000469415 RAD54LQ92698 747 aa19.83■□□□□ 0.77
MCF2L-221ENST00000469415 RAB34Q9BZG1 259 aa19.83■□□□□ 0.77
MCF2L-221ENST00000469415 CEP112Q8N8E3 955 aa19.83■□□□□ 0.76
MCF2L-221ENST00000469415 NEK11Q8NG66 645 aa19.83■□□□□ 0.76
MCF2L-221ENST00000469415 CYP2W1Q8TAV3 490 aa19.83■□□□□ 0.76
MCF2L-221ENST00000469415 EHD2Q9NZN4 543 aa19.83■□□□□ 0.76
MCF2L-221ENST00000469415 N4BP1O75113 896 aaKnown RBP19.82■□□□□ 0.76
MCF2L-221ENST00000469415 PABPC4Q13310 644 aaKnown RBP eCLIP19.82■□□□□ 0.76
MCF2L-221ENST00000469415 SKIDA1Q1XH10 827 aa19.82■□□□□ 0.76
MCF2L-221ENST00000469415 CDC37Q16543 378 aaPredicted RBP19.82■□□□□ 0.76
MCF2L-221ENST00000469415 DNAJC7Q99615 494 aa19.82■□□□□ 0.76
MCF2L-221ENST00000469415 PDE11AQ9HCR9 933 aa19.82■□□□□ 0.76
MCF2L-221ENST00000469415 PANK4Q9NVE7 773 aa19.82■□□□□ 0.76
MCF2L-221ENST00000469415 CLRN2A0PK11 232 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 SFI1A8K8P3 1242 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 BUB1O43683 1085 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 UNC13DQ70J99 1090 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 GPBP1Q86WP2 473 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 LRRC53A6NM62 1247 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 ZNF263O14978 683 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 CYLC1P35663 651 aaPredicted RBP19.81■□□□□ 0.76
MCF2L-221ENST00000469415 EIF4A3P38919 411 aaKnown RBP19.81■□□□□ 0.76
MCF2L-221ENST00000469415 TNNT3P45378 269 aaPredicted RBP19.81■□□□□ 0.76
MCF2L-221ENST00000469415 RNASE9P60153 205 aaKnown RBP19.81■□□□□ 0.76
MCF2L-221ENST00000469415 PSMC6P62333 389 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 SPA17Q15506 151 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 AOC3Q16853 763 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 RIC8AQ9NPQ8 531 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 CHMP2AO43633 222 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 MOCS3O95396 460 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 FAM193AP78312 1265 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 VWA3BQ502W6 1294 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 FAM114A1Q8IWE2 563 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 P2RX7Q99572 595 aaKnown RBP19.81■□□□□ 0.76
MCF2L-221ENST00000469415 FUT8Q9BYC5 575 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 CUEDC2Q9H467 287 aa19.81■□□□□ 0.76
MCF2L-221ENST00000469415 JAG1P78504 1218 aa19.8■□□□□ 0.76
MCF2L-221ENST00000469415 ICA1Q05084 483 aa19.8■□□□□ 0.76
MCF2L-221ENST00000469415 COASYQ13057 564 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms