RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 ZNF792Q3KQV3 632 aa22.05■■□□□ 1.12
USP11-205ENST00000467378 C16orf59Q7L2K0 433 aa22.05■■□□□ 1.12
USP11-205ENST00000467378 RGS22Q8NE09 1264 aa22.05■■□□□ 1.12
USP11-205ENST00000467378 DDX11Q96FC9 970 aa22.05■■□□□ 1.12
USP11-205ENST00000467378 CYP39A1Q9NYL5 469 aa22.05■■□□□ 1.12
USP11-205ENST00000467378 SEC63Q9UGP8 760 aaKnown RBP22.05■■□□□ 1.12
USP11-205ENST00000467378 TBX21Q9UL17 535 aa22.05■■□□□ 1.12
USP11-205ENST00000467378 MRPL11Q9Y3B7 192 aaKnown RBP22.05■■□□□ 1.12
USP11-205ENST00000467378 OPLAHO14841 1288 aa22.04■■□□□ 1.12
USP11-205ENST00000467378 PRPF3O43395 683 aaKnown RBP22.04■■□□□ 1.12
USP11-205ENST00000467378 ADAMTS4O75173 837 aa22.04■■□□□ 1.12
USP11-205ENST00000467378 ACRP10323 421 aa22.04■■□□□ 1.12
USP11-205ENST00000467378 CSF2RAP15509 400 aa22.04■■□□□ 1.12
USP11-205ENST00000467378 RAB30Q15771 203 aa22.04■■□□□ 1.12
USP11-205ENST00000467378 TBC1D5Q92609 795 aa22.04■■□□□ 1.12
USP11-205ENST00000467378 MAF1Q9H063 256 aa22.04■■□□□ 1.12
USP11-205ENST00000467378 LIMCH1Q9UPQ0 1083 aa22.04■■□□□ 1.12
USP11-205ENST00000467378 DIS3Q9Y2L1 958 aaKnown RBP22.04■■□□□ 1.12
USP11-205ENST00000467378 ZNF865P0CJ78 1059 aaPredicted RBP22.03■■□□□ 1.12
USP11-205ENST00000467378 RASIP1Q5U651 963 aa22.03■■□□□ 1.12
USP11-205ENST00000467378 PSRC1Q6PGN9 363 aaPredicted RBP22.03■■□□□ 1.12
USP11-205ENST00000467378 NSMFQ6X4W1 530 aa22.03■■□□□ 1.12
USP11-205ENST00000467378 ZNF365Q70YC5 407 aa22.03■■□□□ 1.12
USP11-205ENST00000467378 MICALL1Q8N3F8 863 aa22.03■■□□□ 1.12
USP11-205ENST00000467378 TMEM199Q8N511 208 aa22.03■■□□□ 1.12
USP11-205ENST00000467378 PHKBQ93100 1093 aa22.03■■□□□ 1.12
USP11-205ENST00000467378 NKX2-4Q9H2Z4 354 aa22.03■■□□□ 1.12
USP11-205ENST00000467378 MROH7Q68CQ1 1323 aa22.03■■□□□ 1.12
USP11-205ENST00000467378 SYNRGQ9UMZ2 1314 aa22.03■■□□□ 1.12
USP11-205ENST00000467378 MCM3APO60318 1980 aa22.02■■□□□ 1.12
USP11-205ENST00000467378 MOXD2PA6NHM9 499 aa22.02■■□□□ 1.12
USP11-205ENST00000467378 ST18O60284 1047 aa22.02■■□□□ 1.12
USP11-205ENST00000467378 BAATQ14032 418 aaPredicted RBP22.02■■□□□ 1.12
USP11-205ENST00000467378 KCNA10Q16322 511 aa22.02■■□□□ 1.12
USP11-205ENST00000467378 RNF207Q6ZRF8 634 aa22.02■■□□□ 1.12
USP11-205ENST00000467378 NECAB1Q8N987 351 aa22.02■■□□□ 1.12
USP11-205ENST00000467378 FAM133AQ8N9E0 248 aa22.02■■□□□ 1.12
USP11-205ENST00000467378 VTI1AQ96AJ9 217 aa22.02■■□□□ 1.12
USP11-205ENST00000467378 FGD4Q96M96 766 aa22.02■■□□□ 1.12
USP11-205ENST00000467378 RNF26Q9BY78 433 aaPredicted RBP22.02■■□□□ 1.12
USP11-205ENST00000467378 PPP1R12CQ9BZL4 782 aa22.02■■□□□ 1.12
USP11-205ENST00000467378 SLC28A3Q9HAS3 691 aa22.02■■□□□ 1.12
USP11-205ENST00000467378 CXXC1Q9P0U4 656 aaPredicted RBP22.02■■□□□ 1.12
USP11-205ENST00000467378 CNPY2Q9Y2B0 182 aa22.02■■□□□ 1.12
USP11-205ENST00000467378 HCN4Q9Y3Q4 1203 aa22.02■■□□□ 1.12
USP11-205ENST00000467378 CNTN2Q02246 1040 aa22.01■■□□□ 1.11
USP11-205ENST00000467378 GHRHRQ02643 423 aa22.01■■□□□ 1.11
USP11-205ENST00000467378 PKN1Q16512 942 aa22.01■■□□□ 1.11
USP11-205ENST00000467378 MCF2L2Q86YR7 1114 aa22.01■■□□□ 1.11
USP11-205ENST00000467378 GTF3C6Q969F1 213 aa22.01■■□□□ 1.11
USP11-205ENST00000467378 ZSCAN31Q96LW9 406 aaPredicted RBP22.01■■□□□ 1.11
USP11-205ENST00000467378 GLT1D1Q96MS3 346 aa22.01■■□□□ 1.11
USP11-205ENST00000467378 SLC26A6Q9BXS9 759 aa22.01■■□□□ 1.11
USP11-205ENST00000467378 PTPDC1A2A3K4 754 aa22■■□□□ 1.11
USP11-205ENST00000467378 SOWAHBA6NEL2 793 aa22■■□□□ 1.11
USP11-205ENST00000467378 CPLX1O14810 134 aa22■■□□□ 1.11
USP11-205ENST00000467378 PPFIA3O75145 1194 aa22■■□□□ 1.11
USP11-205ENST00000467378 CD2BP2O95400 341 aaKnown RBP22■■□□□ 1.11
USP11-205ENST00000467378 CTDNEP1O95476 244 aa22■■□□□ 1.11
USP11-205ENST00000467378 BMP1P13497 986 aa22■■□□□ 1.11
USP11-205ENST00000467378 RPS6P62753 249 aaKnown RBP22■■□□□ 1.11
USP11-205ENST00000467378 ST3GAL1Q11201 340 aa22■■□□□ 1.11
USP11-205ENST00000467378 PFKFB3Q16875 520 aaPredicted RBP22■■□□□ 1.11
USP11-205ENST00000467378 WWC2Q6AWC2 1192 aa22■■□□□ 1.11
USP11-205ENST00000467378 CPLX2Q6PUV4 134 aaKnown RBP22■■□□□ 1.11
USP11-205ENST00000467378 SLC30A10Q6XR72 485 aa22■■□□□ 1.11
USP11-205ENST00000467378 GPKOWQ92917 476 aaPredicted RBP eCLIP22■■□□□ 1.11
USP11-205ENST00000467378 HSD17B4P51659 736 aa21.99■■□□□ 1.11
USP11-205ENST00000467378 TFF2Q03403 129 aa21.99■■□□□ 1.11
USP11-205ENST00000467378 SSRP1Q08945 709 aaKnown RBP21.99■■□□□ 1.11
USP11-205ENST00000467378 ZNF467Q7Z7K2 595 aaPredicted RBP21.99■■□□□ 1.11
USP11-205ENST00000467378 SAMD3Q8N6K7 520 aa21.99■■□□□ 1.11
USP11-205ENST00000467378 KLHDC9Q8NEP7 349 aa21.99■■□□□ 1.11
USP11-205ENST00000467378 PURBQ96QR8 312 aaKnown RBP21.99■■□□□ 1.11
USP11-205ENST00000467378 MTIF3Q9H2K0 278 aaKnown RBP21.99■■□□□ 1.11
USP11-205ENST00000467378 MAP3K20Q9NYL2 800 aaKnown RBP21.99■■□□□ 1.11
USP11-205ENST00000467378 FAM184BQ9ULE4 1060 aa21.99■■□□□ 1.11
USP11-205ENST00000467378 hCG_1984214I3L0E3 225 aa21.98■■□□□ 1.11
USP11-205ENST00000467378 CFBP00751 764 aa21.98■■□□□ 1.11
USP11-205ENST00000467378 SCG2P13521 617 aa21.98■■□□□ 1.11
USP11-205ENST00000467378 CALML3P27482 149 aa21.98■■□□□ 1.11
USP11-205ENST00000467378 AKAP17AQ02040 695 aaKnown RBP21.98■■□□□ 1.11
USP11-205ENST00000467378 AAK1Q2M2I8 961 aa21.98■■□□□ 1.11
USP11-205ENST00000467378 TYW1BQ6NUM6 668 aa21.98■■□□□ 1.11
USP11-205ENST00000467378 HEATR3Q7Z4Q2 680 aa21.98■■□□□ 1.11
USP11-205ENST00000467378 ZNF713Q8N859 430 aaPredicted RBP21.98■■□□□ 1.11
USP11-205ENST00000467378 LRFN3Q9BTN0 628 aa21.98■■□□□ 1.11
USP11-205ENST00000467378 BARHL2Q9NY43 387 aa21.98■■□□□ 1.11
USP11-205ENST00000467378 ASTN1O14525 1302 aa21.98■■□□□ 1.11
USP11-205ENST00000467378 ELP1O95163 1332 aa21.98■■□□□ 1.11
USP11-205ENST00000467378 MYADML2A6NDP7 307 aa21.97■■□□□ 1.11
USP11-205ENST00000467378 STXBP3O00186 592 aa21.97■■□□□ 1.11
USP11-205ENST00000467378 TLR3O15455 904 aaKnown RBP21.97■■□□□ 1.11
USP11-205ENST00000467378 CDKL5O76039 1030 aa21.97■■□□□ 1.11
USP11-205ENST00000467378 CDK7P50613 346 aa21.97■■□□□ 1.11
USP11-205ENST00000467378 SKIV2LQ15477 1246 aaKnown RBP21.97■■□□□ 1.11
USP11-205ENST00000467378 MAMDC4Q6UXC1 1216 aa21.97■■□□□ 1.11
USP11-205ENST00000467378 TRIM22Q8IYM9 498 aa21.97■■□□□ 1.11
USP11-205ENST00000467378 SYTL5Q8TDW5 730 aaPredicted RBP21.97■■□□□ 1.11
USP11-205ENST00000467378 IL23AQ9NPF7 189 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms