RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 INTS4Q96HW7 963 aaKnown RBP7.28□□□□□ -1.24
SF3B1-206ENST00000462613 DEFB118Q96PH6 123 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 AP5M1Q9H0R1 490 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 UNC93B1Q9H1C4 597 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 COL20A1Q9P218 1284 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 DDX20Q9UHI6 824 aaKnown RBP7.28□□□□□ -1.24
SF3B1-206ENST00000462613 MYH15Q9Y2K3 1946 aa7.28□□□□□ -1.24
SF3B1-206ENST00000462613 KBTBD13C9JR72 458 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 MAFGO15525 162 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 FIBPO43427 364 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 DUSP11O75319 330 aaKnown RBP7.27□□□□□ -1.25
SF3B1-206ENST00000462613 CD2BP2O95400 341 aaKnown RBP7.27□□□□□ -1.25
SF3B1-206ENST00000462613 SGPL1O95470 568 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 SNAI1O95863 264 aaPredicted RBP7.27□□□□□ -1.25
SF3B1-206ENST00000462613 MMP1P03956 469 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 MYCNP04198 464 aaPredicted RBP7.27□□□□□ -1.25
SF3B1-206ENST00000462613 TXNP10599 105 aaKnown RBP7.27□□□□□ -1.25
SF3B1-206ENST00000462613 TGFB3P10600 412 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 EDNRBP24530 442 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 GJB2P29033 226 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 CCND3P30281 292 aaPredicted RBP7.27□□□□□ -1.25
SF3B1-206ENST00000462613 ANP32AP39687 249 aaKnown RBP7.27□□□□□ -1.25
SF3B1-206ENST00000462613 FOSBP53539 338 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 ARHGAP4P98171 946 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 SETQ01105 290 aaPredicted RBP7.27□□□□□ -1.25
SF3B1-206ENST00000462613 NEDD9Q14511 834 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 MTFR1Q15390 333 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 LARP1BQ659C4 914 aaKnown RBP7.27□□□□□ -1.25
SF3B1-206ENST00000462613 KRT40Q6A162 431 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 TYW1BQ6NUM6 668 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 RNF180Q86T96 592 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 VSIG10LQ86VR7 867 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 FBXO16Q8IX29 292 aaPredicted RBP7.27□□□□□ -1.25
SF3B1-206ENST00000462613 ANKLE1Q8NAG6 615 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 PCSK9Q8NBP7 692 aaKnown RBP7.27□□□□□ -1.25
SF3B1-206ENST00000462613 AIFM3Q96NN9 605 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 PURBQ96QR8 312 aaKnown RBP7.27□□□□□ -1.25
SF3B1-206ENST00000462613 PHF20Q9BVI0 1012 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 WDR11Q9BZH6 1224 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 PAK6Q9NQU5 681 aaPredicted RBP7.27□□□□□ -1.25
SF3B1-206ENST00000462613 NOL7Q9UMY1 257 aaKnown RBP7.27□□□□□ -1.25
SF3B1-206ENST00000462613 KCNJ14Q9UNX9 436 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 Q9Y3F1 56 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 FRMPD4Q14CM0 1322 aa7.27□□□□□ -1.25
SF3B1-206ENST00000462613 NOP56O00567 594 aaKnown RBP7.26□□□□□ -1.25
SF3B1-206ENST00000462613 MARCH6O60337 910 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 GH1P01241 217 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 C6orf222P0C671 652 aaPredicted RBP7.26□□□□□ -1.25
SF3B1-206ENST00000462613 ZNF865P0CJ78 1059 aaPredicted RBP7.26□□□□□ -1.25
SF3B1-206ENST00000462613 FDPSP14324 419 aaKnown RBP7.26□□□□□ -1.25
SF3B1-206ENST00000462613 SREBF1P36956 1147 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 ADCYAP1R1P41586 468 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 GJA8P48165 433 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 CLK2P49760 499 aaKnown RBP7.26□□□□□ -1.25
SF3B1-206ENST00000462613 CPT1AP50416 773 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 USP11P51784 963 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 TRIM32Q13049 653 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 MTMR1Q13613 665 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 CUL4AQ13619 759 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 DUSP28Q4G0W2 176 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 CEP55Q53EZ4 464 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 PRAMEF19Q5SWL8 479 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 MCTP1Q6DN14 999 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 NEK8Q86SG6 692 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 TLK2Q86UE8 772 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 DIS3L2Q8IYB7 885 aaKnown RBP7.26□□□□□ -1.25
SF3B1-206ENST00000462613 FBXO18Q8NFZ0 1043 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 U2AF1L4Q8WU68 220 aaKnown RBP7.26□□□□□ -1.25
SF3B1-206ENST00000462613 GPRASP2Q96D09 838 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 FGD4Q96M96 766 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 FOXP1Q9H334 677 aaPredicted RBP7.26□□□□□ -1.25
SF3B1-206ENST00000462613 MLXIPQ9HAP2 919 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 XPNPEP3Q9NQH7 507 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 TMEM260Q9NX78 707 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 RTEL1Q9NZ71 1219 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 LOXHD1Q8IVV2 1947 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 ASTN1O14525 1302 aa7.26□□□□□ -1.25
SF3B1-206ENST00000462613 VPS37CA5D8V6 355 aaPredicted RBP7.25□□□□□ -1.25
SF3B1-206ENST00000462613 DNM1LO00429 736 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 DYNC1LI2O43237 492 aaPredicted RBP7.25□□□□□ -1.25
SF3B1-206ENST00000462613 KPNA6O60684 536 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 IGHA2P01877 340 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 CYP3A4P08684 503 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 GCFC2P16383 781 aaKnown RBP7.25□□□□□ -1.25
SF3B1-206ENST00000462613 GUCY1B3Q02153 619 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 ST3GAL1Q11201 340 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 LAMC2Q13753 1193 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 ANO1Q5XXA6 986 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 MOXD1Q6UVY6 613 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 PIK3AP1Q6ZUJ8 805 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 NIPA1Q7RTP0 329 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 PLA2G4DQ86XP0 818 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 DHX37Q8IY37 1157 aaKnown RBP7.25□□□□□ -1.25
SF3B1-206ENST00000462613 OR6J1Q8NGC5 347 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 RASGRP4Q8TDF6 673 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 TBCKQ8TEA7 893 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 PGBD1Q96JS3 809 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 INPP4AQ96PE3 977 aaPredicted RBP7.25□□□□□ -1.25
SF3B1-206ENST00000462613 MXRA8Q9BRK3 442 aa7.25□□□□□ -1.25
SF3B1-206ENST00000462613 SDF4Q9BRK5 362 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms