RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 NEFLP07196 543 aa21.87■■□□□ 1.09
COL5A1-203ENST00000460264 MYCLP12524 364 aaPredicted RBP21.87■■□□□ 1.09
COL5A1-203ENST00000460264 ADCK5Q3MIX3 580 aa21.87■■□□□ 1.09
COL5A1-203ENST00000460264 VSIG10LQ86VR7 867 aa21.87■■□□□ 1.09
COL5A1-203ENST00000460264 CMTR1Q8N1G2 835 aaKnown RBP21.87■■□□□ 1.09
COL5A1-203ENST00000460264 RNPC3Q96LT9 517 aaKnown RBP21.87■■□□□ 1.09
COL5A1-203ENST00000460264 HIPK3Q9H422 1215 aa21.87■■□□□ 1.09
COL5A1-203ENST00000460264 DDX41Q9UJV9 622 aaKnown RBP21.87■■□□□ 1.09
COL5A1-203ENST00000460264 MRVI1Q9Y6F6 885 aa21.87■■□□□ 1.09
COL5A1-203ENST00000460264 FRMPD4Q14CM0 1322 aa21.86■■□□□ 1.09
COL5A1-203ENST00000460264 UMODL1Q5DID0 1318 aa21.86■■□□□ 1.09
COL5A1-203ENST00000460264 MMP3P08254 477 aa21.86■■□□□ 1.09
COL5A1-203ENST00000460264 CSF2RAP15509 400 aa21.86■■□□□ 1.09
COL5A1-203ENST00000460264 CYP2C18P33260 490 aa21.86■■□□□ 1.09
COL5A1-203ENST00000460264 EXOSC10Q01780 885 aaKnown RBP21.86■■□□□ 1.09
COL5A1-203ENST00000460264 PPIGQ13427 754 aaKnown RBP eCLIP21.86■■□□□ 1.09
COL5A1-203ENST00000460264 NBPF20Q3BBV1 942 aa21.86■■□□□ 1.09
COL5A1-203ENST00000460264 TMTC3Q6ZXV5 915 aa21.86■■□□□ 1.09
COL5A1-203ENST00000460264 MICU3Q86XE3 530 aa21.86■■□□□ 1.09
COL5A1-203ENST00000460264 TMEM199Q8N511 208 aa21.86■■□□□ 1.09
COL5A1-203ENST00000460264 FANCBQ8NB91 859 aa21.86■■□□□ 1.09
COL5A1-203ENST00000460264 TCEANC2Q96MN5 208 aa21.86■■□□□ 1.09
COL5A1-203ENST00000460264 NOC4LQ9BVI4 516 aaKnown RBP21.86■■□□□ 1.09
COL5A1-203ENST00000460264 TANC1Q9C0D5 1861 aa21.86■■□□□ 1.09
COL5A1-203ENST00000460264 CCND2P30279 289 aa21.85■■□□□ 1.09
COL5A1-203ENST00000460264 KRT32Q14532 448 aa21.85■■□□□ 1.09
COL5A1-203ENST00000460264 APOA5Q6Q788 366 aa21.85■■□□□ 1.09
COL5A1-203ENST00000460264 DHX32Q7L7V1 743 aaKnown RBP21.85■■□□□ 1.09
COL5A1-203ENST00000460264 EMID1Q96A84 441 aaPredicted RBP21.85■■□□□ 1.09
COL5A1-203ENST00000460264 TRMT13Q9NUP7 481 aaKnown RBP21.85■■□□□ 1.09
COL5A1-203ENST00000460264 SMAD3P84022 425 aaKnown RBP21.84■■□□□ 1.09
COL5A1-203ENST00000460264 FAM109BQ6ICB4 259 aaPredicted RBP21.84■■□□□ 1.09
COL5A1-203ENST00000460264 NFRKBQ6P4R8 1299 aa21.84■■□□□ 1.09
COL5A1-203ENST00000460264 C16orf59Q7L2K0 433 aa21.84■■□□□ 1.09
COL5A1-203ENST00000460264 PPP1R13LQ8WUF5 828 aa21.84■■□□□ 1.09
COL5A1-203ENST00000460264 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.84■■□□□ 1.09
COL5A1-203ENST00000460264 MTMR10Q9NXD2 777 aa21.84■■□□□ 1.09
COL5A1-203ENST00000460264 DOCK5Q9H7D0 1870 aa21.83■■□□□ 1.09
COL5A1-203ENST00000460264 FAM47CQ5HY64 1035 aa21.83■■□□□ 1.09
COL5A1-203ENST00000460264 KCNV1Q6PIU1 500 aa21.83■■□□□ 1.09
COL5A1-203ENST00000460264 KCNB2Q92953 911 aa21.83■■□□□ 1.09
COL5A1-203ENST00000460264 WNT8AQ9H1J5 351 aa21.83■■□□□ 1.09
COL5A1-203ENST00000460264 PIK3CDO00329 1044 aa21.82■■□□□ 1.08
COL5A1-203ENST00000460264 MEIS2O14770 477 aa21.82■■□□□ 1.08
COL5A1-203ENST00000460264 SUPT20HL2P0C7V6 817 aa21.82■■□□□ 1.08
COL5A1-203ENST00000460264 CYP2C9P11712 490 aa21.82■■□□□ 1.08
COL5A1-203ENST00000460264 LAMC2Q13753 1193 aa21.82■■□□□ 1.08
COL5A1-203ENST00000460264 DGKDQ16760 1214 aa21.82■■□□□ 1.08
COL5A1-203ENST00000460264 TMEM240Q5SV17 173 aa21.82■■□□□ 1.08
COL5A1-203ENST00000460264 USP17L6PQ6QN14 398 aa21.82■■□□□ 1.08
COL5A1-203ENST00000460264 SYNE3Q6ZMZ3 975 aa21.82■■□□□ 1.08
COL5A1-203ENST00000460264 CCDC82Q8N4S0 544 aa21.82■■□□□ 1.08
COL5A1-203ENST00000460264 PPTC7Q8NI37 304 aa21.82■■□□□ 1.08
COL5A1-203ENST00000460264 ZFP91Q96JP5 570 aaPredicted RBP21.82■■□□□ 1.08
COL5A1-203ENST00000460264 BRPF3Q9ULD4 1205 aa21.82■■□□□ 1.08
COL5A1-203ENST00000460264 SCN5AQ14524 2016 aa21.82■■□□□ 1.08
COL5A1-203ENST00000460264 hCG_1642624A0A1W2PR95 340 aa21.81■■□□□ 1.08
COL5A1-203ENST00000460264 HMGB1P09429 215 aaKnown RBP21.81■■□□□ 1.08
COL5A1-203ENST00000460264 ACRP10323 421 aa21.81■■□□□ 1.08
COL5A1-203ENST00000460264 UBA1P22314 1058 aaKnown RBP21.81■■□□□ 1.08
COL5A1-203ENST00000460264 CCL23P55773 120 aa21.81■■□□□ 1.08
COL5A1-203ENST00000460264 MRPS9P82933 396 aaKnown RBP21.81■■□□□ 1.08
COL5A1-203ENST00000460264 PTPN11Q06124 597 aaPredicted RBP21.81■■□□□ 1.08
COL5A1-203ENST00000460264 PSRC1Q6PGN9 363 aaPredicted RBP21.81■■□□□ 1.08
COL5A1-203ENST00000460264 DHX37Q8IY37 1157 aaKnown RBP21.81■■□□□ 1.08
COL5A1-203ENST00000460264 SMARCC2Q8TAQ2 1214 aa21.81■■□□□ 1.08
COL5A1-203ENST00000460264 KAT2BQ92831 832 aa21.81■■□□□ 1.08
COL5A1-203ENST00000460264 GPKOWQ92917 476 aaPredicted RBP eCLIP21.81■■□□□ 1.08
COL5A1-203ENST00000460264 CUL5Q93034 780 aa21.81■■□□□ 1.08
COL5A1-203ENST00000460264 IL23AQ9NPF7 189 aa21.81■■□□□ 1.08
COL5A1-203ENST00000460264 COL6A3P12111 3177 aa21.81■■□□□ 1.08
COL5A1-203ENST00000460264 CNTNAP5Q8WYK1 1306 aa21.8■■□□□ 1.08
COL5A1-203ENST00000460264 ZBTB43O43298 467 aa21.8■■□□□ 1.08
COL5A1-203ENST00000460264 GGPS1O95749 300 aa21.8■■□□□ 1.08
COL5A1-203ENST00000460264 TGFB3P10600 412 aa21.8■■□□□ 1.08
COL5A1-203ENST00000460264 HOXD8P13378 290 aaPredicted RBP21.8■■□□□ 1.08
COL5A1-203ENST00000460264 CASTP20810 708 aaKnown RBP21.8■■□□□ 1.08
COL5A1-203ENST00000460264 HSPA4P34932 840 aa21.8■■□□□ 1.08
COL5A1-203ENST00000460264 CHMP4BP1P59074 171 aa21.8■■□□□ 1.08
COL5A1-203ENST00000460264 SP2Q02086 613 aa21.8■■□□□ 1.08
COL5A1-203ENST00000460264 CELF3Q5SZQ8 465 aaKnown RBP21.8■■□□□ 1.08
COL5A1-203ENST00000460264 RASIP1Q5U651 963 aa21.8■■□□□ 1.08
COL5A1-203ENST00000460264 MYSM1Q5VVJ2 828 aa21.8■■□□□ 1.08
COL5A1-203ENST00000460264 INPP4AQ96PE3 977 aaPredicted RBP21.8■■□□□ 1.08
COL5A1-203ENST00000460264 RBM28Q9NW13 759 aaKnown RBP21.8■■□□□ 1.08
COL5A1-203ENST00000460264 STAM2O75886 525 aa21.79■■□□□ 1.08
COL5A1-203ENST00000460264 F2P00734 622 aa21.79■■□□□ 1.08
COL5A1-203ENST00000460264 RTN1Q16799 776 aa21.79■■□□□ 1.08
COL5A1-203ENST00000460264 ZNF697Q5TEC3 545 aa21.79■■□□□ 1.08
COL5A1-203ENST00000460264 ZNF365Q70YC5 407 aa21.79■■□□□ 1.08
COL5A1-203ENST00000460264 PSTPIP2Q9H939 334 aa21.79■■□□□ 1.08
COL5A1-203ENST00000460264 SNX14Q9Y5W7 946 aa21.79■■□□□ 1.08
COL5A1-203ENST00000460264 TRIP12Q14669 1992 aaPredicted RBP21.78■■□□□ 1.08
COL5A1-203ENST00000460264 GBF1Q92538 1859 aa21.78■■□□□ 1.08
COL5A1-203ENST00000460264 KLF18A0A0U1RQI7 1052 aa21.78■■□□□ 1.08
COL5A1-203ENST00000460264 SORBS3O60504 671 aa21.78■■□□□ 1.08
COL5A1-203ENST00000460264 REC8O95072 547 aa21.78■■□□□ 1.08
COL5A1-203ENST00000460264 ZNF286BP0CG31 522 aa21.78■■□□□ 1.08
COL5A1-203ENST00000460264 CPA1P15085 419 aa21.78■■□□□ 1.08
COL5A1-203ENST00000460264 FUT2Q10981 343 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms