RNA–Protein interactions for RNA: ENST00000453560.6

RAP1B-208, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-208ENST00000453560 NEFLP07196 543 aa22.4■■□□□ 1.18
RAP1B-208ENST00000453560 KRT32Q14532 448 aa22.4■■□□□ 1.18
RAP1B-208ENST00000453560 DHX32Q7L7V1 743 aaKnown RBP22.4■■□□□ 1.18
RAP1B-208ENST00000453560 RAB11FIP4Q86YS3 637 aa22.4■■□□□ 1.18
RAP1B-208ENST00000453560 CMTR1Q8N1G2 835 aaKnown RBP22.4■■□□□ 1.18
RAP1B-208ENST00000453560 FANCBQ8NB91 859 aa22.4■■□□□ 1.18
RAP1B-208ENST00000453560 PPP1R12CQ9BZL4 782 aa22.4■■□□□ 1.18
RAP1B-208ENST00000453560 SEC63Q9UGP8 760 aaKnown RBP22.4■■□□□ 1.18
RAP1B-208ENST00000453560 MMP3P08254 477 aa22.39■■□□□ 1.17
RAP1B-208ENST00000453560 MYCLP12524 364 aaPredicted RBP22.39■■□□□ 1.17
RAP1B-208ENST00000453560 APOA5Q6Q788 366 aa22.39■■□□□ 1.17
RAP1B-208ENST00000453560 TMTC3Q6ZXV5 915 aa22.39■■□□□ 1.17
RAP1B-208ENST00000453560 FCHSD1Q86WN1 690 aa22.39■■□□□ 1.17
RAP1B-208ENST00000453560 MICU3Q86XE3 530 aa22.39■■□□□ 1.17
RAP1B-208ENST00000453560 AFG1LQ8WV93 481 aa22.39■■□□□ 1.17
RAP1B-208ENST00000453560 EMID1Q96A84 441 aaPredicted RBP22.39■■□□□ 1.17
RAP1B-208ENST00000453560 TCEANC2Q96MN5 208 aa22.39■■□□□ 1.17
RAP1B-208ENST00000453560 MRVI1Q9Y6F6 885 aa22.39■■□□□ 1.17
RAP1B-208ENST00000453560 NBPF20Q3BBV1 942 aa22.38■■□□□ 1.17
RAP1B-208ENST00000453560 Q7L0L9 218 aa22.38■■□□□ 1.17
RAP1B-208ENST00000453560 TMEM199Q8N511 208 aa22.38■■□□□ 1.17
RAP1B-208ENST00000453560 DEFB123Q8N688 67 aa22.38■■□□□ 1.17
RAP1B-208ENST00000453560 KCNB2Q92953 911 aa22.38■■□□□ 1.17
RAP1B-208ENST00000453560 NOC4LQ9BVI4 516 aaKnown RBP22.38■■□□□ 1.17
RAP1B-208ENST00000453560 HIPK3Q9H422 1215 aa22.38■■□□□ 1.17
RAP1B-208ENST00000453560 UMODL1Q5DID0 1318 aa22.37■■□□□ 1.17
RAP1B-208ENST00000453560 PIK3CDO00329 1044 aa22.37■■□□□ 1.17
RAP1B-208ENST00000453560 CSF2RAP15509 400 aa22.37■■□□□ 1.17
RAP1B-208ENST00000453560 CCND2P30279 289 aa22.37■■□□□ 1.17
RAP1B-208ENST00000453560 CYP2C18P33260 490 aa22.37■■□□□ 1.17
RAP1B-208ENST00000453560 PPIGQ13427 754 aaKnown RBP eCLIP22.37■■□□□ 1.17
RAP1B-208ENST00000453560 NFRKBQ6P4R8 1299 aa22.37■■□□□ 1.17
RAP1B-208ENST00000453560 C16orf59Q7L2K0 433 aa22.37■■□□□ 1.17
RAP1B-208ENST00000453560 RNPC3Q96LT9 517 aaKnown RBP22.37■■□□□ 1.17
RAP1B-208ENST00000453560 TRMT13Q9NUP7 481 aaKnown RBP22.37■■□□□ 1.17
RAP1B-208ENST00000453560 TANC1Q9C0D5 1861 aa22.37■■□□□ 1.17
RAP1B-208ENST00000453560 EYSQ5T1H1 3165 aa22.36■■□□□ 1.17
RAP1B-208ENST00000453560 MEIS2O14770 477 aa22.36■■□□□ 1.17
RAP1B-208ENST00000453560 HMGB1P09429 215 aaKnown RBP22.36■■□□□ 1.17
RAP1B-208ENST00000453560 HSPA4P34932 840 aa22.36■■□□□ 1.17
RAP1B-208ENST00000453560 FAM109BQ6ICB4 259 aaPredicted RBP22.36■■□□□ 1.17
RAP1B-208ENST00000453560 KCNV1Q6PIU1 500 aa22.36■■□□□ 1.17
RAP1B-208ENST00000453560 SYNE3Q6ZMZ3 975 aa22.36■■□□□ 1.17
RAP1B-208ENST00000453560 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.36■■□□□ 1.17
RAP1B-208ENST00000453560 BRPF3Q9ULD4 1205 aa22.36■■□□□ 1.17
RAP1B-208ENST00000453560 DOCK5Q9H7D0 1870 aa22.35■■□□□ 1.17
RAP1B-208ENST00000453560 SUPT20HL2P0C7V6 817 aa22.35■■□□□ 1.17
RAP1B-208ENST00000453560 MRPS9P82933 396 aaKnown RBP22.35■■□□□ 1.17
RAP1B-208ENST00000453560 SMAD3P84022 425 aaKnown RBP22.35■■□□□ 1.17
RAP1B-208ENST00000453560 PTPN11Q06124 597 aaPredicted RBP22.35■■□□□ 1.17
RAP1B-208ENST00000453560 LAMC2Q13753 1193 aa22.35■■□□□ 1.17
RAP1B-208ENST00000453560 USP17L6PQ6QN14 398 aa22.35■■□□□ 1.17
RAP1B-208ENST00000453560 CCDC82Q8N4S0 544 aa22.35■■□□□ 1.17
RAP1B-208ENST00000453560 PPTC7Q8NI37 304 aa22.35■■□□□ 1.17
RAP1B-208ENST00000453560 WNT8AQ9H1J5 351 aa22.35■■□□□ 1.17
RAP1B-208ENST00000453560 CNTNAP5Q8WYK1 1306 aa22.34■■□□□ 1.17
RAP1B-208ENST00000453560 CHD9Q3L8U1 2897 aa22.34■■□□□ 1.17
RAP1B-208ENST00000453560 hCG_1642624A0A1W2PR95 340 aa22.34■■□□□ 1.17
RAP1B-208ENST00000453560 TGFB3P10600 412 aa22.34■■□□□ 1.17
RAP1B-208ENST00000453560 DGKDQ16760 1214 aa22.34■■□□□ 1.17
RAP1B-208ENST00000453560 TMEM240Q5SV17 173 aa22.34■■□□□ 1.17
RAP1B-208ENST00000453560 MYSM1Q5VVJ2 828 aa22.34■■□□□ 1.17
RAP1B-208ENST00000453560 DHX37Q8IY37 1157 aaKnown RBP22.34■■□□□ 1.17
RAP1B-208ENST00000453560 SMARCC2Q8TAQ2 1214 aa22.34■■□□□ 1.17
RAP1B-208ENST00000453560 PPP1R13LQ8WUF5 828 aa22.34■■□□□ 1.17
RAP1B-208ENST00000453560 KAT2BQ92831 832 aa22.34■■□□□ 1.17
RAP1B-208ENST00000453560 CUL5Q93034 780 aa22.34■■□□□ 1.17
RAP1B-208ENST00000453560 ZFP91Q96JP5 570 aaPredicted RBP22.34■■□□□ 1.17
RAP1B-208ENST00000453560 RBM28Q9NW13 759 aaKnown RBP22.34■■□□□ 1.17
RAP1B-208ENST00000453560 MTMR10Q9NXD2 777 aa22.34■■□□□ 1.17
RAP1B-208ENST00000453560 SNX14Q9Y5W7 946 aa22.34■■□□□ 1.17
RAP1B-208ENST00000453560 ZBTB43O43298 467 aa22.33■■□□□ 1.17
RAP1B-208ENST00000453560 STAM2O75886 525 aa22.33■■□□□ 1.17
RAP1B-208ENST00000453560 HOXD8P13378 290 aaPredicted RBP22.33■■□□□ 1.17
RAP1B-208ENST00000453560 CASTP20810 708 aaKnown RBP22.33■■□□□ 1.17
RAP1B-208ENST00000453560 UBA1P22314 1058 aaKnown RBP22.33■■□□□ 1.17
RAP1B-208ENST00000453560 SP2Q02086 613 aa22.33■■□□□ 1.17
RAP1B-208ENST00000453560 FAM47CQ5HY64 1035 aa22.33■■□□□ 1.17
RAP1B-208ENST00000453560 CELF3Q5SZQ8 465 aaKnown RBP22.33■■□□□ 1.17
RAP1B-208ENST00000453560 GPKOWQ92917 476 aaPredicted RBP eCLIP22.33■■□□□ 1.171e-6■■■■■ 28.4
RAP1B-208ENST00000453560 INPP4AQ96PE3 977 aaPredicted RBP22.33■■□□□ 1.17
RAP1B-208ENST00000453560 IL23AQ9NPF7 189 aa22.33■■□□□ 1.17
RAP1B-208ENST00000453560 SCN5AQ14524 2016 aa22.33■■□□□ 1.16
RAP1B-208ENST00000453560 KLF18A0A0U1RQI7 1052 aa22.32■■□□□ 1.16
RAP1B-208ENST00000453560 REC8O95072 547 aa22.32■■□□□ 1.16
RAP1B-208ENST00000453560 GGPS1O95749 300 aa22.32■■□□□ 1.16
RAP1B-208ENST00000453560 CYP2C9P11712 490 aa22.32■■□□□ 1.16
RAP1B-208ENST00000453560 CPA1P15085 419 aa22.32■■□□□ 1.16
RAP1B-208ENST00000453560 RCAN1P53805 252 aa22.32■■□□□ 1.16
RAP1B-208ENST00000453560 CCL23P55773 120 aa22.32■■□□□ 1.16
RAP1B-208ENST00000453560 FUT2Q10981 343 aa22.32■■□□□ 1.16
RAP1B-208ENST00000453560 RTN1Q16799 776 aa22.32■■□□□ 1.16
RAP1B-208ENST00000453560 RASIP1Q5U651 963 aa22.32■■□□□ 1.16
RAP1B-208ENST00000453560 PSRC1Q6PGN9 363 aaPredicted RBP22.32■■□□□ 1.16
RAP1B-208ENST00000453560 SESTD1Q86VW0 696 aa22.32■■□□□ 1.16
RAP1B-208ENST00000453560 PSTPIP2Q9H939 334 aa22.32■■□□□ 1.16
RAP1B-208ENST00000453560 F2P00734 622 aa22.31■■□□□ 1.16
RAP1B-208ENST00000453560 ACRP10323 421 aa22.31■■□□□ 1.16
RAP1B-208ENST00000453560 ICAM3P32942 547 aa22.31■■□□□ 1.16
RAP1B-208ENST00000453560 HSDL1Q3SXM5 330 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms