RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 ARID4BQ4LE39 1312 aaPredicted RBP5.99□□□□□ -1.45
LINC00393-202ENST00000452852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.99□□□□□ -1.45
LINC00393-202ENST00000452852 ARHGEF40Q8TER5 1519 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 ADAMTSL3P82987 1691 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 TTC37Q6PGP7 1564 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 FANCAO15360 1455 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 A0A1W2PQ27 194 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 A0A1W2PQ64 194 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 A0A1W2PQC6 194 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 A0A1W2PQD8 194 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 NOP56O00567 594 aaKnown RBP5.99□□□□□ -1.45
LINC00393-202ENST00000452852 SUSD5O60279 629 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 RAPGEF3O95398 923 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 KRT1P04264 644 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 ARL4AP40617 200 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 BUD31P41223 144 aaPredicted RBP5.99□□□□□ -1.45
LINC00393-202ENST00000452852 SEPHS1P49903 392 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 GYS2P54840 703 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 ERVFRD-1P60508 538 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 LAPTM5Q13571 262 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 RASGRF1Q13972 1273 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 SV2CQ496J9 727 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 POMZP3Q6PJE2 187 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 HOMER1Q86YM7 354 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 TRIM59Q8IWR1 403 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 BHLHE22Q8NFJ8 381 aaPredicted RBP5.99□□□□□ -1.45
LINC00393-202ENST00000452852 KCNN1Q92952 543 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 MRGPRX3Q96LB0 322 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 PPP1R16BQ96T49 567 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 BRINP2Q9C0B6 783 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 SLKQ9H2G2 1235 aaPredicted RBP5.99□□□□□ -1.45
LINC00393-202ENST00000452852 KLHL42Q9P2K6 505 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 KIF14Q15058 1648 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 FMN1Q68DA7 1419 aa5.99□□□□□ -1.45
LINC00393-202ENST00000452852 RIMS1Q86UR5 1692 aaKnown RBP5.98□□□□□ -1.45
LINC00393-202ENST00000452852 DENND4BO75064 1496 aaPredicted RBP5.98□□□□□ -1.45
LINC00393-202ENST00000452852 ETV2O00321 342 aaPredicted RBP5.98□□□□□ -1.45
LINC00393-202ENST00000452852 TBX1O43435 398 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 DIAPH1O60610 1272 aaKnown RBP5.98□□□□□ -1.45
LINC00393-202ENST00000452852 PEX10O60683 326 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 TSPAN15O95858 294 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 TMEM253P0C7T8 217 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 C1QTNF9P0C862 333 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 RAP1GAPP47736 663 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 TKFCQ3LXA3 575 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 MTERF2Q49AM1 385 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 GTF2IRD2BQ6EKJ0 949 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 NOL8Q76FK4 1167 aaKnown RBP5.98□□□□□ -1.45
LINC00393-202ENST00000452852 SPATC1Q76KD6 591 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 GTF2IRD2Q86UP8 949 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 CRACR2BQ8N4Y2 399 aaPredicted RBP5.98□□□□□ -1.45
LINC00393-202ENST00000452852 MADDQ8WXG6 1647 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 CDK13Q14004 1512 aaKnown RBP5.98□□□□□ -1.45
LINC00393-202ENST00000452852 AKNAQ7Z591 1439 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 FER1L4A9Z1Z3 1794 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 KDM2BQ8NHM5 1336 aa5.98□□□□□ -1.45
LINC00393-202ENST00000452852 NFIBO00712 420 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 MPOP05164 745 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 ITGAVP06756 1048 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 L1CAMP32004 1257 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 SCRN1Q12765 414 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 C21orf62-AS1Q17RA5 79 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 TMEM132EQ6IEE7 984 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 KIAA0907Q7Z7F0 614 aaPredicted RBP5.97□□□□□ -1.45
LINC00393-202ENST00000452852 CPNE8Q86YQ8 564 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 RPUSD2Q8IZ73 545 aaKnown RBP5.97□□□□□ -1.45
LINC00393-202ENST00000452852 COPS5Q92905 334 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 TNFRSF12AQ9NP84 129 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 GPRC5CQ9NQ84 441 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 TMEM260Q9NX78 707 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 KLHL14Q9P2G3 628 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 LRP2BPQ9P2M1 347 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 ZMYM4Q5VZL5 1548 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 ZFYVE16Q7Z3T8 1539 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 POGZQ7Z3K3 1410 aa5.97□□□□□ -1.45
LINC00393-202ENST00000452852 PTPRMP28827 1452 aa5.96□□□□□ -1.45
LINC00393-202ENST00000452852 PAMP19021 973 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 GLDCP23378 1020 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 VIPR1P32241 457 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 YBX1P67809 324 aaKnown RBP5.96□□□□□ -1.46
LINC00393-202ENST00000452852 AMPD3Q01432 767 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 ATG14Q6ZNE5 492 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 EEPD1Q7L9B9 569 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 ZNF227Q86WZ6 799 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 NLGN2Q8NFZ4 835 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 BTN2A2Q8WVV5 523 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 SGPP1Q9BX95 441 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 NKX2-4Q9H2Z4 354 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 PDLIM7Q9NR12 457 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 CYP26B1Q9NR63 512 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 CLEC1BQ9P126 229 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 PRKAB1Q9Y478 270 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 CLIP1P30622 1438 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 LRRIQ1Q96JM4 1722 aa5.96□□□□□ -1.46
LINC00393-202ENST00000452852 NPHP3-ACAD11A0A0J9YXS1 232 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 TEX51A0A1B0GUA7 166 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 NUDT19A8MXV4 375 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 HRKO00198 91 aa5.95□□□□□ -1.46
LINC00393-202ENST00000452852 SEMA7AO75326 666 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms