RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 TRAPPC3O43617 180 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 ERVK-9P63128 1117 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 PUM3Q15397 648 aaKnown RBP15.39■□□□□ 0.05
VPS52-212ENST00000445902 UAP1Q16222 522 aaPredicted RBP15.39■□□□□ 0.05
VPS52-212ENST00000445902 CDC37Q16543 378 aaPredicted RBP15.39■□□□□ 0.05
VPS52-212ENST00000445902 SLC4A8Q2Y0W8 1093 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 CACNA2D4Q7Z3S7 1137 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 CPLX4Q7Z7G2 160 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 MREGQ8N565 214 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 RAPGEF5Q92565 580 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 HVCN1Q96D96 273 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 NDST4Q9H3R1 872 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 MTMR7Q9Y216 660 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 SIK3Q9Y2K2 1263 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 PLCG1P19174 1290 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 CYP7A1P22680 504 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 CDC25CP30307 473 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 MRPL12P52815 198 aaKnown RBP15.39■□□□□ 0.05
VPS52-212ENST00000445902 ZNF844Q08AG5 666 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 DRP2Q13474 957 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 HIBCHQ6NVY1 386 aaPredicted RBP15.39■□□□□ 0.05
VPS52-212ENST00000445902 FAM114A1Q8IWE2 563 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 WHAMMQ8TF30 809 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 TANGO6Q9C0B7 1094 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 SLC12A6Q9UHW9 1150 aa15.39■□□□□ 0.05
VPS52-212ENST00000445902 KAT6BQ8WYB5 2073 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 BICDL2A1A5D9 508 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 IRS4O14654 1257 aaPredicted RBP15.38■□□□□ 0.05
VPS52-212ENST00000445902 FLT3P36888 993 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 RCAN1P53805 252 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 FAM47AQ5JRC9 791 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 EMC10Q5UCC4 262 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 MSL1Q68DK7 614 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 KIF6Q6ZMV9 814 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 ARFGAP2Q8N6H7 521 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 MDM1Q8TC05 714 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 TRIM6Q9C030 488 aaPredicted RBP15.38■□□□□ 0.05
VPS52-212ENST00000445902 NEUROG2Q9H2A3 272 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 KCNG1Q9UIX4 513 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 KLRC1P26715 233 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 HSPA9P38646 679 aaKnown RBP15.38■□□□□ 0.05
VPS52-212ENST00000445902 PPP1R7Q15435 360 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 INF2Q27J81 1249 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 VWA3BQ502W6 1294 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 DNAAF5Q86Y56 855 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 ZSCAN29Q8IWY8 852 aaPredicted RBP15.38■□□□□ 0.05
VPS52-212ENST00000445902 THOC1Q96FV9 657 aaKnown RBP15.38■□□□□ 0.05
VPS52-212ENST00000445902 AP1M1Q9BXS5 423 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 SEMA6BQ9H3T3 888 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 KBTBD4Q9NVX7 518 aa15.38■□□□□ 0.05
VPS52-212ENST00000445902 BCORQ6W2J9 1755 aa15.37■□□□□ 0.05
VPS52-212ENST00000445902 A0A1B0GUA9 196 aa15.37■□□□□ 0.05
VPS52-212ENST00000445902 GNAT2P19087 354 aa15.37■□□□□ 0.05
VPS52-212ENST00000445902 PROSER2Q86WR7 435 aaPredicted RBP15.37■□□□□ 0.05
VPS52-212ENST00000445902 STAMBPL1Q96FJ0 436 aa15.37■□□□□ 0.05
VPS52-212ENST00000445902 PACSIN1Q9BY11 444 aa15.37■□□□□ 0.05
VPS52-212ENST00000445902 TAF1DQ9H5J8 278 aaPredicted RBP15.37■□□□□ 0.05
VPS52-212ENST00000445902 RBM28Q9NW13 759 aaKnown RBP15.37■□□□□ 0.05
VPS52-212ENST00000445902 HNRNPH3P31942 346 aaKnown RBP15.37■□□□□ 0.05
VPS52-212ENST00000445902 MAGOHP61326 146 aaKnown RBP15.37■□□□□ 0.05
VPS52-212ENST00000445902 CRYMQ14894 314 aa15.37■□□□□ 0.05
VPS52-212ENST00000445902 FIGNQ5HY92 759 aa15.37■□□□□ 0.05
VPS52-212ENST00000445902 ARL6IP4Q66PJ3 421 aaKnown RBP15.37■□□□□ 0.05
VPS52-212ENST00000445902 TCP11Q8WWU5 503 aa15.37■□□□□ 0.05
VPS52-212ENST00000445902 MAGOHBQ96A72 148 aaKnown RBP15.37■□□□□ 0.05
VPS52-212ENST00000445902 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.37■□□□□ 0.05
VPS52-212ENST00000445902 PLA2G12BQ9BX93 195 aa15.37■□□□□ 0.05
VPS52-212ENST00000445902 TRMT112Q9UI30 125 aaKnown RBP15.37■□□□□ 0.05
VPS52-212ENST00000445902 GGA2Q9UJY4 613 aa15.37■□□□□ 0.05
VPS52-212ENST00000445902 LCA5LO95447 670 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 MYO1EQ12965 1108 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 KIAA0895Q8NCT3 520 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 PLCB1Q9NQ66 1216 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 FBXL5Q9UKA1 691 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 TMCO5BA8MYB1 307 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 KCNK3O14649 394 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 BUB1BO60566 1050 aaPredicted RBP15.36■□□□□ 0.05
VPS52-212ENST00000445902 TRAPPC10P48553 1259 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 PPP2R2AP63151 447 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 DYNLL1P63167 89 aaKnown RBP15.36■□□□□ 0.05
VPS52-212ENST00000445902 GKAP1Q5VSY0 366 aaPredicted RBP15.36■□□□□ 0.05
VPS52-212ENST00000445902 TLDC1Q6P9B6 456 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 PNMA8AQ86V59 439 aaPredicted RBP15.36■□□□□ 0.05
VPS52-212ENST00000445902 BLIDQ8IZY5 108 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 BAP1Q92560 729 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 TRIM9Q9C026 710 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 KANSL2Q9H9L4 492 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 NOD2Q9HC29 1040 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 H0YGN5 161 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 PJA2O43164 708 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 ATP6V1G2O95670 118 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 CLTAP09496 248 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 SLC5A1P13866 664 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 ECHS1P30084 290 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 CCNHP51946 323 aaPredicted RBP15.36■□□□□ 0.05
VPS52-212ENST00000445902 PPP2R5BQ15173 497 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 INPP4AQ96PE3 977 aaPredicted RBP15.36■□□□□ 0.05
VPS52-212ENST00000445902 L3MBTL1Q9Y468 752 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 NFS1Q9Y697 457 aa15.36■□□□□ 0.05
VPS52-212ENST00000445902 PNPLA7Q6ZV29 1317 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms