RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 USP49Q70CQ1 688 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 TMC4Q7Z404 712 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 MAIP1Q8WWC4 291 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 CELF1Q92879 486 aaKnown RBP18.24■□□□□ 0.51
TCOF1-206ENST00000445265 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.24■□□□□ 0.51
TCOF1-206ENST00000445265 MYO5BQ9ULV0 1848 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 BACH1O14867 736 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 CASP7P55210 303 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 RDH13Q8NBN7 331 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 GJA10Q969M2 543 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 MPHOSPH6Q99547 160 aaKnown RBP18.24■□□□□ 0.51
TCOF1-206ENST00000445265 FAM205CA6NFA0 338 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 SCNN1DP51172 638 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 PPP4R3CPQ6ZMV5 832 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 PROM2Q8N271 834 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 SH3RF3Q8TEJ3 882 aaPredicted RBP18.24■□□□□ 0.51
TCOF1-206ENST00000445265 IFT74Q96LB3 600 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 LARSQ9P2J5 1176 aaKnown RBP18.24■□□□□ 0.51
TCOF1-206ENST00000445265 TRIM37O94972 964 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 LMNB1P20700 586 aa18.24■□□□□ 0.51
TCOF1-206ENST00000445265 PNMA6FA0A0J9YX94 578 aa18.23■□□□□ 0.51
TCOF1-206ENST00000445265 EIF3CLB5ME19 914 aaKnown RBP18.23■□□□□ 0.51
TCOF1-206ENST00000445265 ZSCAN20P17040 1043 aaPredicted RBP18.23■□□□□ 0.51
TCOF1-206ENST00000445265 GAP43P17677 238 aa18.23■□□□□ 0.51
TCOF1-206ENST00000445265 CYP4A11Q02928 519 aa18.23■□□□□ 0.51
TCOF1-206ENST00000445265 EIF3CQ99613 913 aaKnown RBP18.23■□□□□ 0.51
TCOF1-206ENST00000445265 CCSER1Q9C0I3 900 aa18.23■□□□□ 0.51
TCOF1-206ENST00000445265 CAPN11Q9UMQ6 739 aa18.23■□□□□ 0.51
TCOF1-206ENST00000445265 DDX39AO00148 427 aaKnown RBP18.23■□□□□ 0.51
TCOF1-206ENST00000445265 IRX2Q9BZI1 471 aaPredicted RBP18.23■□□□□ 0.51
TCOF1-206ENST00000445265 HOMER2Q9NSB8 354 aa18.23■□□□□ 0.51
TCOF1-206ENST00000445265 RGS16O15492 202 aaPredicted RBP18.23■□□□□ 0.51
TCOF1-206ENST00000445265 TXNRD1Q16881 649 aa18.23■□□□□ 0.51
TCOF1-206ENST00000445265 GLE1Q53GS7 698 aaKnown RBP18.23■□□□□ 0.51
TCOF1-206ENST00000445265 PBKQ96KB5 322 aa18.23■□□□□ 0.51
TCOF1-206ENST00000445265 STIM2Q9P246 746 aa18.23■□□□□ 0.51
TCOF1-206ENST00000445265 PGRMC1O00264 195 aaKnown RBP18.23■□□□□ 0.51
TCOF1-206ENST00000445265 PLA2G4BP0C869 781 aa18.23■□□□□ 0.51
TCOF1-206ENST00000445265 C6orf163Q5TEZ5 329 aa18.23■□□□□ 0.51
TCOF1-206ENST00000445265 KCTD16Q68DU8 428 aa18.23■□□□□ 0.51
TCOF1-206ENST00000445265 ZCCHC17Q9NP64 241 aaKnown RBP18.23■□□□□ 0.51
TCOF1-206ENST00000445265 GAS8O95995 478 aa18.22■□□□□ 0.51
TCOF1-206ENST00000445265 WDR78Q5VTH9 848 aa18.22■□□□□ 0.51
TCOF1-206ENST00000445265 MSANTD4Q8NCY6 345 aa18.22■□□□□ 0.51
TCOF1-206ENST00000445265 FBF1Q8TES7 1133 aa18.22■□□□□ 0.51
TCOF1-206ENST00000445265 KDM6AO15550 1401 aaPredicted RBP18.22■□□□□ 0.51
TCOF1-206ENST00000445265 ZYXQ15942 572 aaKnown RBP18.22■□□□□ 0.51
TCOF1-206ENST00000445265 FAM133AQ8N9E0 248 aa18.22■□□□□ 0.51
TCOF1-206ENST00000445265 KANSL2Q9H9L4 492 aa18.22■□□□□ 0.51
TCOF1-206ENST00000445265 POLR2MP0CAP2 368 aa18.22■□□□□ 0.51
TCOF1-206ENST00000445265 CACNA2D3Q8IZS8 1091 aa18.22■□□□□ 0.51
TCOF1-206ENST00000445265 WHAMMQ8TF30 809 aa18.22■□□□□ 0.51
TCOF1-206ENST00000445265 MAP3K14Q99558 947 aa18.22■□□□□ 0.51
TCOF1-206ENST00000445265 DPH5Q9H2P9 285 aa18.22■□□□□ 0.51
TCOF1-206ENST00000445265 MRPL11Q9Y3B7 192 aaKnown RBP18.22■□□□□ 0.51
TCOF1-206ENST00000445265 SIGLEC1Q9BZZ2 1709 aa18.22■□□□□ 0.51
TCOF1-206ENST00000445265 FTCDO95954 541 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 ALDH3A1P30838 453 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 GYS2P54840 703 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 PTPROQ16827 1216 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 EFCAB13Q8IY85 973 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 FERMT1Q9BQL6 677 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 RPS6KA4O75676 772 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 ATP2A2P16615 1042 aaKnown RBP18.21■□□□□ 0.51
TCOF1-206ENST00000445265 GBP1P32455 592 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 USP14P54578 494 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 MIER3Q7Z3K6 550 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 REXO1L1PQ8IX06 675 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 NSUN4Q96CB9 384 aaKnown RBP18.21■□□□□ 0.51
TCOF1-206ENST00000445265 FAM114A2Q9NRY5 505 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 SRP68Q9UHB9 627 aaKnown RBP18.21■□□□□ 0.51
TCOF1-206ENST00000445265 SRGAP2O75044 1071 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 FXR1P51114 621 aaKnown RBP eCLIP18.21■□□□□ 0.51
TCOF1-206ENST00000445265 KCTD1Q719H9 257 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 ADSSL1Q8N142 457 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 GUF1Q8N442 669 aaKnown RBP18.21■□□□□ 0.51
TCOF1-206ENST00000445265 VTI1AQ96AJ9 217 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 NARFQ9UHQ1 456 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 CAPN7Q9Y6W3 813 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 PSMC2P35998 433 aaKnown RBP18.21■□□□□ 0.51
TCOF1-206ENST00000445265 LIG3P49916 1009 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 RAD9BQ6WBX8 426 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 USP21Q9UK80 565 aa18.21■□□□□ 0.51
TCOF1-206ENST00000445265 PP2D1A8MPX8 630 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 SLC16A2P36021 539 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 LACTBP83111 547 aaPredicted RBP18.2■□□□□ 0.5
TCOF1-206ENST00000445265 KCNQ4P56696 695 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 INTS8Q75QN2 995 aaKnown RBP18.2■□□□□ 0.5
TCOF1-206ENST00000445265 TRIM7Q9C029 511 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 CEP72Q9P209 647 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 MEGF6O75095 1541 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 CACNB1Q02641 598 aaPredicted RBP18.2■□□□□ 0.5
TCOF1-206ENST00000445265 ZBTB16Q05516 673 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 SBK1Q52WX2 424 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 GKAP1Q5VSY0 366 aaPredicted RBP18.2■□□□□ 0.5
TCOF1-206ENST00000445265 FAM186BQ8IYM0 893 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 RNF10Q8N5U6 811 aaKnown RBP18.2■□□□□ 0.5
TCOF1-206ENST00000445265 CEP63Q96MT8 703 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 SALL1Q9NSC2 1324 aa18.2■□□□□ 0.5
TCOF1-206ENST00000445265 PLEKHG2Q9H7P9 1386 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms