RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 MEIS1O00470 390 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 KIAA0754O94854 1291 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 NFIAQ12857 509 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 PABPC4Q13310 644 aaKnown RBP eCLIP11.69□□□□□ -0.54
TOP3B-210ENST00000444502 DPP9Q86TI2 863 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 GPBP1Q86WP2 473 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 ACRBPQ8NEB7 543 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 MAP3K14Q99558 947 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 BPIFA3Q9BQP9 254 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 CRACR2AQ9BSW2 395 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 TMEM260Q9NX78 707 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 MYO3BQ8WXR4 1341 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 GMPSP49915 693 aaPredicted RBP11.69□□□□□ -0.54
TOP3B-210ENST00000444502 KCTD2Q14681 263 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 EARS2Q5JPH6 523 aaKnown RBP11.69□□□□□ -0.54
TOP3B-210ENST00000444502 ANGEL2Q5VTE6 544 aaKnown RBP11.69□□□□□ -0.54
TOP3B-210ENST00000444502 SEPT14Q6ZU15 432 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 OR8K1Q8NGG5 319 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 PLCD4Q9BRC7 762 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 IREB2P48200 963 aaKnown RBP11.69□□□□□ -0.54
TOP3B-210ENST00000444502 IGBP1P78318 339 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 GNPTABQ3T906 1256 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 MCTP2Q6DN12 878 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 TTBK2Q6IQ55 1244 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 POTEAQ6S8J7 498 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 PRPF38AQ8NAV1 312 aaKnown RBP11.69□□□□□ -0.54
TOP3B-210ENST00000444502 GBP3Q9H0R5 595 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 POLD4Q9HCU8 107 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 KIAA1024Q9UPX6 916 aa11.69□□□□□ -0.54
TOP3B-210ENST00000444502 MAGEA9P43362 315 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 RCAN1P53805 252 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 KRT31Q15323 416 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 SEC23AQ15436 765 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 ARMC9Q7Z3E5 817 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 CEP112Q8N8E3 955 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 NAPGQ99747 312 aaPredicted RBP11.68□□□□□ -0.54
TOP3B-210ENST00000444502 DISC1Q9NRI5 854 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 ADAM21Q9UKJ8 722 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 PCDHB13Q9Y5F0 798 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 POLRMTO00411 1230 aaKnown RBP11.68□□□□□ -0.54
TOP3B-210ENST00000444502 E4F1Q66K89 784 aaPredicted RBP11.68□□□□□ -0.54
TOP3B-210ENST00000444502 SLC16A10Q8TF71 515 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 CTNNBL1Q8WYA6 563 aaPredicted RBP11.68□□□□□ -0.54
TOP3B-210ENST00000444502 ALS2CR12Q96Q35 445 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 HINFPQ9BQA5 517 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 GGA3Q9NZ52 723 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 SLC10A5Q5PT55 438 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 ZNF658Q5TYW1 1059 aaPredicted RBP11.68□□□□□ -0.54
TOP3B-210ENST00000444502 IQCEQ6IPM2 695 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 GALNT17Q6IS24 598 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 TOGARAM2Q6ZUX3 1019 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 NBPF11Q86T75 865 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 FBXL16Q8N461 479 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 IMPG2Q9BZV3 1241 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 RAVER2Q9HCJ3 691 aaKnown RBP11.68□□□□□ -0.54
TOP3B-210ENST00000444502 TACC1O75410 805 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 ERLIN2O94905 339 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 SMTNP53814 917 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 MTF1Q14872 753 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 XKR9Q5GH70 373 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 JPH2Q9BR39 696 aaPredicted RBP11.68□□□□□ -0.54
TOP3B-210ENST00000444502 TUBGCP2Q9BSJ2 902 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 TRPC6Q9Y210 931 aa11.68□□□□□ -0.54
TOP3B-210ENST00000444502 CNTNAP5Q8WYK1 1306 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 PRCPP42785 496 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 ATP2C1P98194 919 aaPredicted RBP11.67□□□□□ -0.54
TOP3B-210ENST00000444502 BRDTQ58F21 947 aaPredicted RBP11.67□□□□□ -0.54
TOP3B-210ENST00000444502 IFT74Q96LB3 600 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 PSEN1P49768 467 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 CDR1P51861 262 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 HMGCS2P54868 508 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 RNASE9P60153 205 aaKnown RBP11.67□□□□□ -0.54
TOP3B-210ENST00000444502 TRIM14Q14142 442 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 GRM4Q14833 912 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 RRAGAQ7L523 313 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 PACS2Q86VP3 889 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 PRMT6Q96LA8 375 aaPredicted RBP11.67□□□□□ -0.54
TOP3B-210ENST00000444502 KCNQ5Q9NR82 932 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 POTEMA6NI47 508 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 EXOC3O60645 756 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 VEGFAP15692 232 aaPredicted RBP11.67□□□□□ -0.54
TOP3B-210ENST00000444502 PLA2G4AP47712 749 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 SATB1Q01826 763 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 RASSF7Q02833 373 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 USP37Q86T82 979 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 MCF2L2Q86YR7 1114 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 ANKRD13CQ8N6S4 541 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 JAKMIP2Q96AA8 810 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 FNBP1Q96RU3 617 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 MTFR1LQ9H019 292 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 HPSEQ9Y251 543 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 FRMD4BQ9Y2L6 1034 aa11.67□□□□□ -0.54
TOP3B-210ENST00000444502 CETN3O15182 167 aa11.66□□□□□ -0.54
TOP3B-210ENST00000444502 RPL13P26373 211 aaKnown RBP11.66□□□□□ -0.54
TOP3B-210ENST00000444502 USP14P54578 494 aa11.66□□□□□ -0.54
TOP3B-210ENST00000444502 FAM102BQ5T8I3 360 aa11.66□□□□□ -0.54
TOP3B-210ENST00000444502 RSBN1LQ6PCB5 846 aaPredicted RBP11.66□□□□□ -0.54
TOP3B-210ENST00000444502 RASGRP2Q7LDG7 609 aa11.66□□□□□ -0.54
TOP3B-210ENST00000444502 SLC35F6Q8N357 371 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms