RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 FAM167AQ96KS9 214 aa15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 FAM20AQ96MK3 541 aa15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 NFE2L3Q9Y4A8 694 aa15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 PTGS1P23219 599 aa15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 CDC25AP30304 524 aa15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 ABI1Q8IZP0 508 aa15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 STX10O60499 249 aa15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 PTPN14Q15678 1187 aa15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 CCDC102AQ96A19 550 aa15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 CCDC42Q96M95 316 aa15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 LMBRD1Q9NUN5 540 aa15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 PRPF6O94906 941 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 GNAT1P11488 350 aa15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 ARMCX5Q6P1M9 558 aa15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 RIC8AQ9NPQ8 531 aa15.6■□□□□ 0.09
SMARCA4-204ENST00000444061 HNRNPDLO14979 420 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 ERCC3P19447 782 aa15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 CDR1P51861 262 aa15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 MRIQ9BWK5 157 aa15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 KIAA1468Q9P260 1216 aa15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 TOPAZ1Q8N9V7 1692 aa15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 GAP43P17677 238 aa15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 NDUFA8P51970 172 aa15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 CTNNBL1Q8WYA6 563 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 CDCA5Q96FF9 252 aa15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 CTTNQ14247 550 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 FAM49AQ9H0Q0 323 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 SLC39A2Q9NP94 309 aa15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 KMT5AQ9NQR1 393 aa15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 ANKFY1Q9P2R3 1169 aa15.59■□□□□ 0.09
SMARCA4-204ENST00000444061 RESTQ13127 1097 aa15.58■□□□□ 0.09
SMARCA4-204ENST00000444061 NLRP7Q8WX94 980 aa15.58■□□□□ 0.09
SMARCA4-204ENST00000444061 KIFAP3Q92845 792 aa15.58■□□□□ 0.09
SMARCA4-204ENST00000444061 OPTNQ96CV9 577 aa15.58■□□□□ 0.09
SMARCA4-204ENST00000444061 RPS6KC1Q96S38 1066 aa15.58■□□□□ 0.09
SMARCA4-204ENST00000444061 TRMT1Q9NXH9 659 aaKnown RBP15.58■□□□□ 0.09
SMARCA4-204ENST00000444061 RPN1P04843 607 aaKnown RBP15.58■□□□□ 0.09
SMARCA4-204ENST00000444061 KCNV1Q6PIU1 500 aa15.58■□□□□ 0.09
SMARCA4-204ENST00000444061 CHST13Q8NET6 341 aa15.58■□□□□ 0.09
SMARCA4-204ENST00000444061 FTOQ9C0B1 505 aaKnown RBP eCLIP15.58■□□□□ 0.092e-7■■■□□ 16.1
SMARCA4-204ENST00000444061 PDGFDQ9GZP0 370 aaPredicted RBP15.58■□□□□ 0.09
SMARCA4-204ENST00000444061 RCOR1Q9UKL0 485 aa15.58■□□□□ 0.09
SMARCA4-204ENST00000444061 SRPRBQ9Y5M8 271 aaKnown RBP15.58■□□□□ 0.09
SMARCA4-204ENST00000444061 ANTXR2P58335 489 aa15.58■□□□□ 0.08
SMARCA4-204ENST00000444061 SHPRHQ149N8 1683 aa15.58■□□□□ 0.08
SMARCA4-204ENST00000444061 NUDT12Q9BQG2 462 aa15.58■□□□□ 0.08
SMARCA4-204ENST00000444061 TMEM106CQ9BVX2 250 aa15.58■□□□□ 0.08
SMARCA4-204ENST00000444061 SRRTQ9BXP5 876 aaKnown RBP15.58■□□□□ 0.08
SMARCA4-204ENST00000444061 TSPYL1Q9H0U9 437 aa15.58■□□□□ 0.08
SMARCA4-204ENST00000444061 GNA14O95837 355 aa15.58■□□□□ 0.08
SMARCA4-204ENST00000444061 ZSCAN20P17040 1043 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-204ENST00000444061 CALRP27797 417 aaKnown RBP15.58■□□□□ 0.08
SMARCA4-204ENST00000444061 PAFAH1B1P43034 410 aa15.58■□□□□ 0.08
SMARCA4-204ENST00000444061 LEKR1Q6ZMV7 388 aa15.58■□□□□ 0.08
SMARCA4-204ENST00000444061 SMC1BQ8NDV3 1235 aa15.58■□□□□ 0.08
SMARCA4-204ENST00000444061 GOLGA6L9A6NEM1 432 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 GCLCP48506 637 aaPredicted RBP15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 OXER1Q8TDS5 423 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 POMGNT1Q8WZA1 660 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 FBXO28Q9NVF7 368 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 P4HA1P13674 534 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 PRELPP51888 382 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 BMS1Q14692 1282 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 APOL6Q9BWW8 343 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 LRP6O75581 1613 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 IPO5O00410 1097 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 TXNP10599 105 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 USP11P51784 963 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 PRPF4BQ13523 1007 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 CERS5Q8N5B7 392 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 ANKRD13CQ8N6S4 541 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 TRIML1Q8N9V2 468 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 LRFN2Q9ULH4 789 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 TNNC2P02585 160 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 SFNP31947 248 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 TRMT44Q8IYL2 757 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 SPATA33Q96N06 139 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 MAP3K14Q99558 947 aa15.57■□□□□ 0.08
SMARCA4-204ENST00000444061 TCRBV5S4A2TA0A5A2 114 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 TMX2Q9Y320 296 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 GLTPD2A6NH11 291 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 CXCL11O14625 94 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 CD19P15391 556 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 FCGRTP55899 365 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 ORC2Q13416 577 aaPredicted RBP15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 CEP55Q53EZ4 464 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 RGS22Q8NE09 1264 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 GJA10Q969M2 543 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 PLVAPQ9BX97 442 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 BHMT2Q9H2M3 363 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 DISC1Q9NRI5 854 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 PFASO15067 1338 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 DYNC1I1O14576 645 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 PLA2G4BP0C869 781 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 XRCC5P13010 732 aaKnown RBP15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 EHBP1Q8NDI1 1231 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 IL25Q9H293 177 aa15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 DDX4Q9NQI0 724 aaKnown RBP15.56■□□□□ 0.08
SMARCA4-204ENST00000444061 ARMCX3Q9UH62 379 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms