RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 ST7Q9NRC1 585 aa24.56■■□□□ 1.52
CTDSPL-206ENST00000443503 FAM169AQ9Y6X4 670 aa24.56■■□□□ 1.52
CTDSPL-206ENST00000443503 FOXN1O15353 648 aa24.56■■□□□ 1.52
CTDSPL-206ENST00000443503 VPS41P49754 854 aa24.56■■□□□ 1.52
CTDSPL-206ENST00000443503 SF3A3Q12874 501 aaKnown RBP eCLIP24.56■■□□□ 1.526e-10■■■□□ 14.8
CTDSPL-206ENST00000443503 CEP57Q86XR8 500 aa24.56■■□□□ 1.52
CTDSPL-206ENST00000443503 PANX2Q96RD6 677 aa24.56■■□□□ 1.52
CTDSPL-206ENST00000443503 HNRNPDLO14979 420 aaKnown RBP24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 MTMR3Q13615 1198 aa24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 AFPP02771 609 aaKnown RBP24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 PRR29P0C7W0 189 aa24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 A6NNZ2 444 aa24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 ZMYND10O75800 440 aa24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 IFNB1P01574 187 aa24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 CTNNA1P35221 906 aaKnown RBP24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 TUBB8Q3ZCM7 444 aa24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 CEP85LQ5SZL2 805 aa24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 KAZALD1Q96I82 304 aa24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 TRIM49BA6NDI0 452 aa24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 MFAP3LO75121 409 aa24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 EIF4A3P38919 411 aaKnown RBP24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 CLUL1Q15846 466 aa24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 ZNF34Q8IZ26 560 aa24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 NACC1Q96RE7 527 aa24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 BHMT2Q9H2M3 363 aa24.55■■□□□ 1.52
CTDSPL-206ENST00000443503 PSMC2P35998 433 aaKnown RBP24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 HGSO14964 777 aaPredicted RBP24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 GAP43P17677 238 aa24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 GUCY2DQ02846 1103 aa24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 TRPC6Q9Y210 931 aa24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 BZW2Q9Y6E2 419 aaKnown RBP24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 UTYO14607 1347 aa24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 A0A0G2JLW4 131 aa24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 E7EVH7 732 aa24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 POLGP54098 1239 aaPredicted RBP24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 NFIXQ14938 502 aa24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 SETDB1Q15047 1291 aa24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 PDE11AQ9HCR9 933 aa24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 FEZ2Q9UHY8 353 aaPredicted RBP24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 LRRN2O75325 713 aa24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 CCDC97Q96F63 343 aaPredicted RBP24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 MASTLQ96GX5 879 aa24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 PNMA2Q9UL42 364 aa24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 TECPR2O15040 1411 aa24.54■■□□□ 1.52
CTDSPL-206ENST00000443503 DIP2AQ14689 1571 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 MROH7-TTC4A0A0A0MT08 1334 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 USP17L15C9J2P7 530 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 USP17L13C9JLJ4 530 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 USP17L11C9JVI0 530 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 USP17L18D6R9N7 530 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 USP17L22D6RA61 530 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 USP17L17D6RBQ6 530 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 USP17L19D6RCP7 530 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 USP17L20D6RJB6 530 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 MYL7Q01449 175 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 USP17L24Q0WX57 530 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 USP17L6PQ6QN14 398 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 FAM133AQ8N9E0 248 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 SERPINA10Q9UK55 444 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 PRPF6O94906 941 aaKnown RBP24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 CXCR5P32302 372 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 TMED8Q6PL24 325 aaPredicted RBP24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 OVOS2A0A0G2JMS6 1433 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 PDE6CP51160 858 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 TMEM179Q6ZVK1 233 aa24.53■■□□□ 1.52
CTDSPL-206ENST00000443503 DENND2CQ68D51 928 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 PPP1R21Q6ZMI0 780 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 ZBTB8OSQ8IWT0 167 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 NSUN4Q96CB9 384 aaKnown RBP24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 NHEJ1Q9H9Q4 299 aaPredicted RBP24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 PP2D1A8MPX8 630 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 CRKP46108 304 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 MB21D1Q8N884 522 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 CABS1Q96KC9 395 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 CEP128Q6ZU80 1094 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 NCAPG2Q86XI2 1143 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 IGDCC4Q8TDY8 1250 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 PCIF1Q9H4Z3 704 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 TDRD3Q9H7E2 651 aaKnown RBP24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 FERP16591 822 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 CROCCP2Q86T23 111 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 RASSF4Q9H2L5 321 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 ANKFY1Q9P2R3 1169 aa24.52■■□□□ 1.52
CTDSPL-206ENST00000443503 PSMD2Q13200 908 aa24.51■■□□□ 1.51
CTDSPL-206ENST00000443503 TTC31Q49AM3 519 aaPredicted RBP24.51■■□□□ 1.51
CTDSPL-206ENST00000443503 GADL1Q6ZQY3 521 aa24.51■■□□□ 1.51
CTDSPL-206ENST00000443503 ORC4O43929 436 aa24.51■■□□□ 1.51
CTDSPL-206ENST00000443503 LRRC63Q05C16 580 aa24.51■■□□□ 1.51
CTDSPL-206ENST00000443503 CEP170BQ9Y4F5 1589 aaPredicted RBP24.51■■□□□ 1.51
CTDSPL-206ENST00000443503 H0YCG3 227 aa24.51■■□□□ 1.51
CTDSPL-206ENST00000443503 ZBTB5O15062 677 aa24.51■■□□□ 1.51
CTDSPL-206ENST00000443503 PRCPP42785 496 aa24.51■■□□□ 1.51
CTDSPL-206ENST00000443503 ANTXR2P58335 489 aa24.51■■□□□ 1.51
CTDSPL-206ENST00000443503 GRM4Q14833 912 aa24.51■■□□□ 1.51
CTDSPL-206ENST00000443503 STAG2Q8N3U4 1231 aa24.51■■□□□ 1.51
CTDSPL-206ENST00000443503 SMC6Q96SB8 1091 aa24.51■■□□□ 1.51
CTDSPL-206ENST00000443503 KRT12Q99456 494 aa24.51■■□□□ 1.51
CTDSPL-206ENST00000443503 ZSCAN26Q16670 478 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 AOC3Q16853 763 aa24.5■■□□□ 1.51
CTDSPL-206ENST00000443503 TXNRD1Q16881 649 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms