RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 PRUNE2Q8WUY3 3088 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 BAZ2BQ9UIF8 2168 aaKnown RBP10.13□□□□□ -0.79
USP6NL-203ENST00000443016 CCDC69A6NI79 296 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 TRIM66O15016 1216 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 HOXA13P31271 388 aaPredicted RBP10.13□□□□□ -0.79
USP6NL-203ENST00000443016 ANTXR2P58335 489 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 PPIGQ13427 754 aaKnown RBP eCLIP10.13□□□□□ -0.79
USP6NL-203ENST00000443016 ZNF697Q5TEC3 545 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 RNF20Q5VTR2 975 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 TMTC2Q8N394 836 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 COPS5Q92905 334 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 MYL10Q9BUA6 226 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 BACH2Q9BYV9 841 aa10.13□□□□□ -0.79
USP6NL-203ENST00000443016 PNMA6FA0A0J9YX94 578 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 CARNS1A5YM72 827 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 PPP1R11O60927 126 aaPredicted RBP10.12□□□□□ -0.79
USP6NL-203ENST00000443016 EIF3JO75822 258 aaKnown RBP10.12□□□□□ -0.79
USP6NL-203ENST00000443016 NR3C2P08235 984 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 MYCLP12524 364 aaPredicted RBP10.12□□□□□ -0.79
USP6NL-203ENST00000443016 CSF2RAP15509 400 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 EPHB4P54760 987 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 PURAQ00577 322 aaKnown RBP10.12□□□□□ -0.79
USP6NL-203ENST00000443016 CREB3L3Q68CJ9 461 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 FCHSD1Q86WN1 690 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 ZNF654Q8IZM8 581 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 MTG1Q9BT17 334 aaPredicted RBP10.12□□□□□ -0.79
USP6NL-203ENST00000443016 TRPV6Q9H1D0 765 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 RIOX1Q9H6W3 641 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 PXMP2Q9NR77 195 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 MAP3K20Q9NYL2 800 aaKnown RBP10.12□□□□□ -0.79
USP6NL-203ENST00000443016 SEC63Q9UGP8 760 aaKnown RBP10.12□□□□□ -0.79
USP6NL-203ENST00000443016 MRVI1Q9Y6F6 885 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 CUL9Q8IWT3 2517 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 GCOM1H8Y6P7 765 aaPredicted RBP10.12□□□□□ -0.79
USP6NL-203ENST00000443016 SLC27A2O14975 620 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 ARIH2O95376 493 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 SUPT20HL2P0C7V6 817 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 POLR2MP0CAP2 368 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 CYP2C18P33260 490 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 LY6KQ17RY6 165 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 SLC43A3Q8NBI5 491 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 MTMR8Q96EF0 704 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 TMEM87BQ96K49 555 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 LY9Q9HBG7 655 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 NOD1Q9Y239 953 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 GRIN2DO15399 1336 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 LTBP2Q14767 1821 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 LCTP09848 1927 aa10.12□□□□□ -0.79
USP6NL-203ENST00000443016 MYH6P13533 1939 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 CYTH3O43739 400 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 B4GALT4O60513 344 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 KPNA6O60684 536 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 DDAH1O94760 285 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 GH1P01241 217 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 CD4P01730 458 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 HSD17B4P51659 736 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 CCL23P55773 120 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 RRP36Q96EU6 259 aaKnown RBP10.11□□□□□ -0.79
USP6NL-203ENST00000443016 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.11□□□□□ -0.79
USP6NL-203ENST00000443016 ALDH8A1Q9H2A2 487 aaPredicted RBP10.11□□□□□ -0.79
USP6NL-203ENST00000443016 IGSF5Q9NSI5 407 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 MTMR10Q9NXD2 777 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.11□□□□□ -0.79
USP6NL-203ENST00000443016 SLC12A7Q9Y666 1083 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 OPLAHO14841 1288 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 ACRP10323 421 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 NECTIN1Q15223 517 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 AFG1LQ8WV93 481 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 PDCD2LQ9BRP1 358 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 MTA3Q9BTC8 594 aa10.11□□□□□ -0.79
USP6NL-203ENST00000443016 TRMT13Q9NUP7 481 aaKnown RBP10.11□□□□□ -0.79
USP6NL-203ENST00000443016 RXRAP19793 462 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 CASTP20810 708 aaKnown RBP10.1□□□□□ -0.79
USP6NL-203ENST00000443016 GNAQP50148 359 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 SMAD3P84022 425 aaKnown RBP10.1□□□□□ -0.79
USP6NL-203ENST00000443016 NBPF20Q3BBV1 942 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 CCDC62Q6P9F0 684 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 PSRC1Q6PGN9 363 aaPredicted RBP10.1□□□□□ -0.79
USP6NL-203ENST00000443016 SYNE3Q6ZMZ3 975 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 SAMD3Q8N6K7 520 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 LZTS2Q9BRK4 669 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 LRRC2Q9BYS8 371 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 ARIH1Q9Y4X5 557 aaPredicted RBP10.1□□□□□ -0.79
USP6NL-203ENST00000443016 LRRC37A2A6NM11 1700 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.1□□□□□ -0.79
USP6NL-203ENST00000443016 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.1□□□□□ -0.79
USP6NL-203ENST00000443016 SH2B2O14492 632 aaPredicted RBP10.1□□□□□ -0.79
USP6NL-203ENST00000443016 CALM1P0DP23 149 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 CALM2P0DP24 149 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 CALM3P0DP25 149 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 SLC35G1Q2M3R5 365 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 FAM109BQ6ICB4 259 aaPredicted RBP10.1□□□□□ -0.79
USP6NL-203ENST00000443016 ZNF365Q70YC5 407 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 RAB11FIP4Q86YS3 637 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 SLC17A8Q8NDX2 589 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 PPP1R13LQ8WUF5 828 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 CUL5Q93034 780 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 MAP3K14Q99558 947 aa10.1□□□□□ -0.79
USP6NL-203ENST00000443016 MTIF3Q9H2K0 278 aaKnown RBP10.1□□□□□ -0.79
USP6NL-203ENST00000443016 UMODL1Q5DID0 1318 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms