RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 FAM184AQ8NB25 1140 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 PHC3Q8NDX5 983 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 PMFBP1Q8TBY8 1022 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 TAF4BQ92750 862 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 CENPTQ96BT3 561 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 MPP4Q96JB8 637 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 RMDN2Q96LZ7 410 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 SLC6A17Q9H1V8 727 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 TSPY26PQ9H489 355 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 PIF1Q9H611 641 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 COMMD8Q9NX08 183 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 DDX56Q9NY93 547 aaKnown RBP5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 KIF3AQ9Y496 699 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 CORINQ9Y5Q5 1042 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 KIF13AQ9H1H9 1805 aa5.53□□□□□ -1.52
HMGB3P9-201ENST00000441799 KDM6BO15054 1643 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 GOLGA3Q08378 1498 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 FITM1A5D6W6 292 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 H0YHG0 523 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 SEMA7AO75326 666 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 EFEMP2O95967 443 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 P4HBP07237 508 aaKnown RBP5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 HNRNPCP07910 306 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 TFE3P19532 575 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 LMNB1P20700 586 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 RRM1P23921 792 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 PIK3CAP42336 1068 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 NOP2P46087 812 aaKnown RBP5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 LIG3P49916 1009 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 GALK1P51570 392 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 ZNF131P52739 623 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 ATP2B2Q01814 1243 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 VPS72Q15906 364 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 CCDC93Q567U6 631 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 JAKMIP3Q5VZ66 844 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 KRTAP5-3Q6L8H2 238 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 TAX1BP1Q86VP1 789 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 SKAP1Q86WV1 359 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 CHPFQ8IZ52 775 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 OXR1Q8N573 874 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 MARCH10Q8NA82 808 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 ERP27Q96DN0 273 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 CDK5RAP3Q96JB5 506 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 RNPC3Q96LT9 517 aaKnown RBP5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 TIGD1Q96MW7 591 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 MAP3K14Q99558 947 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 KIF2CQ99661 725 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 ZCCHC4Q9H5U6 513 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 RNF19AQ9NV58 838 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 POLG2Q9UHN1 485 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 ADAM30Q9UKF2 790 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 ZNF281Q9Y2X9 895 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 KCTD3Q9Y597 815 aa5.52□□□□□ -1.53
HMGB3P9-201ENST00000441799 SHTN1A0MZ66 631 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 NPHP1O15259 732 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 PSPNO60542 156 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 TRIM13O60858 407 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 MSL3P1P0C860 447 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 VCAM1P19320 739 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 TSPAN7P41732 249 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 KCNJ4P48050 445 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 TEKQ02763 1124 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 SIM2Q14190 667 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 SSPNQ14714 243 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 SEPT2Q15019 361 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 TAF11Q15544 211 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 TAF7Q15545 349 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 MAP3K11Q16584 847 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 SAMD14Q8IZD0 417 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 MYOCDQ8IZQ8 938 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 ARL6IP6Q8N6S5 226 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 CYB5D2Q8WUJ1 264 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 LINC01599Q8WXQ3 324 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 FRMD6Q96NE9 622 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 DUSP9Q99956 384 aaKnown RBP5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 NOL10Q9BSC4 688 aaKnown RBP5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 TANGO6Q9C0B7 1094 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 PDGFDQ9GZP0 370 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 DHX36Q9H2U1 1008 aaKnown RBP5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 GINM1Q9NU53 330 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 DCAF16Q9NXF7 216 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 TMOD4Q9NZQ9 345 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 USP25Q9UHP3 1055 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 CNOT6Q9ULM6 557 aaKnown RBP5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 SUFUQ9UMX1 484 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 CCDC88BA6NC98 1476 aa5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 POLA1P09884 1462 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 MAGI1Q96QZ7 1491 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P9-201ENST00000441799 CCDC163A0A0D9SF12 145 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 SHISA3A0PJX4 238 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 FAM25EA8MYX2 175 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 SLC27A2O14975 620 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 RNASEH2AO75792 299 aaKnown RBP5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 FOSP01100 380 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 RPN1P04843 607 aaKnown RBP5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 LDHBP07195 334 aaKnown RBP5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 XBP1P17861 261 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 HSD3B2P26439 372 aa5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 ERCC5P28715 1186 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P9-201ENST00000441799 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms