RNA–Protein interactions for RNA: ENST00000440538.6

PUM1-207, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 3,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-207ENST00000440538 PCDHA4Q9UN74 947 aa7.08□□□□□ -1.28
PUM1-207ENST00000440538 MAST2Q6P0Q8 1798 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 SMCHD1A6NHR9 2005 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 POTEB2H3BUK9 544 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 SNHG28P0DPA3 235 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 PABPC4Q13310 644 aaKnown RBP eCLIP7.07□□□□□ -1.283e-15■■■□□ 18.5
PUM1-207ENST00000440538 MYSM1Q5VVJ2 828 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 FAM177A1Q8N128 213 aaPredicted RBP7.07□□□□□ -1.28
PUM1-207ENST00000440538 CLSTN2Q9H4D0 955 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 RBPJLQ9UBG7 517 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 PCDHA6Q9UN73 950 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 MRPL11Q9Y3B7 192 aaKnown RBP7.07□□□□□ -1.28
PUM1-207ENST00000440538 PCDHA8Q9Y5H6 950 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 TLL2Q9Y6L7 1015 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 HTTP42858 3142 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 A0A1B0GVL5 298 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 PP2D1A8MPX8 630 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 GOLGA6L19H0YKK7 550 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 GRIN1Q05586 938 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 IL31RAQ8NI17 732 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 SLC38A10Q9HBR0 1119 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 DICER1Q9UPY3 1922 aaKnown RBP7.07□□□□□ -1.28
PUM1-207ENST00000440538 TNPO2O14787 897 aaKnown RBP7.07□□□□□ -1.28
PUM1-207ENST00000440538 ERVK-9P63128 1117 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 ERVK-24P63145 666 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 CCZ1BP86790 482 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 CCZ1P86791 482 aaPredicted RBP7.07□□□□□ -1.28
PUM1-207ENST00000440538 RAD51AP2Q09MP3 1159 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 NONOQ15233 471 aaKnown RBP eCLIP7.07□□□□□ -1.28
PUM1-207ENST00000440538 TTC38Q5R3I4 469 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 GPAT2Q6NUI2 795 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 GPRC5AQ8NFJ5 357 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 CCDC102AQ96A19 550 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 ANO3Q9BYT9 981 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 GOLPH3LQ9H4A5 285 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 COL20A1Q9P218 1284 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 PCDH10Q9P2E7 1040 aa7.07□□□□□ -1.28
PUM1-207ENST00000440538 CDK5RAP2Q96SN8 1893 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 LAMA4Q16363 1823 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 TECP42680 631 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 CYP4A11Q02928 519 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 PTGDRQ13258 359 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 IQCB1Q15051 598 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 PPP2R5BQ15173 497 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 POTEEQ6S8J3 1075 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 A1CFQ9NQ94 594 aaKnown RBP7.06□□□□□ -1.28
PUM1-207ENST00000440538 PNMA3Q9UL41 463 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 CLCN6P51797 869 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 RESTQ13127 1097 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 NOL9Q5SY16 702 aaKnown RBP7.06□□□□□ -1.28
PUM1-207ENST00000440538 NYAP1Q6ZVC0 841 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 MAEAQ7L5Y9 396 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 POTEDQ86YR6 584 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 IFNL1Q8IU54 200 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 CCAR2Q8N163 923 aaKnown RBP7.06□□□□□ -1.28
PUM1-207ENST00000440538 AOPEPQ8N6M6 819 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 PARK7Q99497 189 aaKnown RBP7.06□□□□□ -1.28
PUM1-207ENST00000440538 MMP19Q99542 508 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 PHF20Q9BVI0 1012 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 ZHX3Q9H4I2 956 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 ZNF214Q9UL59 606 aaPredicted RBP7.06□□□□□ -1.28
PUM1-207ENST00000440538 BECN2A8MW95 431 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 BIN1O00499 593 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 SLU7O95391 586 aaKnown RBP7.06□□□□□ -1.28
PUM1-207ENST00000440538 ICAM1P05362 532 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 PLA2G4AP47712 749 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 LENG1Q96BZ8 264 aaPredicted RBP7.06□□□□□ -1.28
PUM1-207ENST00000440538 MTA3Q9BTC8 594 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 BCAS3Q9H6U6 928 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 ACAD9Q9H845 621 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 ZFYVE28Q9HCC9 887 aa7.06□□□□□ -1.28
PUM1-207ENST00000440538 ZNF536O15090 1300 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 PLIN4Q96Q06 1357 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 MYH8P13535 1937 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 CYP2C19P33261 490 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 PSMC4P43686 418 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 FKBP1BP68106 108 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 NOGQ13253 232 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 ARHGAP29Q52LW3 1261 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 TAF3Q5VWG9 929 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 USP49Q70CQ1 688 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 PROCA1Q8NCQ7 364 aaPredicted RBP7.05□□□□□ -1.28
PUM1-207ENST00000440538 CCDC34Q96HJ3 373 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 ZNF396Q96N95 335 aaPredicted RBP7.05□□□□□ -1.28
PUM1-207ENST00000440538 TMEM60Q9H2L4 133 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 FHOD1Q9Y613 1164 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 PASKQ96RG2 1323 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 KIAA0100Q14667 2235 aaKnown RBP7.05□□□□□ -1.28
PUM1-207ENST00000440538 CCDC66A2RUB6 948 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 MANSC4A6NHS7 340 aaPredicted RBP7.05□□□□□ -1.28
PUM1-207ENST00000440538 POTEMA6NI47 508 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 SLC37A4O43826 429 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 FCER1AP12319 257 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 ELNP15502 786 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 SYCP1Q15431 976 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 TMEM63BQ5T3F8 832 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 NCAPH2Q6IBW4 605 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 IPO4Q8TEX9 1081 aaKnown RBP7.05□□□□□ -1.28
PUM1-207ENST00000440538 WDR11Q9BZH6 1224 aa7.05□□□□□ -1.28
PUM1-207ENST00000440538 RANBP17Q9H2T7 1088 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms