RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 TRAPPC10P48553 1259 aa13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 NASPP49321 788 aaPredicted RBP13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 SKOR2Q2VWA4 1001 aaPredicted RBP13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 MCTP2Q6DN12 878 aa13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 FAM173BQ6P4H8 233 aa13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 FBXO11Q86XK2 927 aa13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 OXER1Q8TDS5 423 aa13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 FERMT2Q96AC1 680 aa13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 RNPC3Q96LT9 517 aaKnown RBP13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 RPAP3Q9H6T3 665 aaPredicted RBP13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 RIC8AQ9NPQ8 531 aa13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 PDLIM7Q9NR12 457 aa13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 LMBRD1Q9NUN5 540 aa13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 RTEL1Q9NZ71 1219 aa13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 PPP1R9AQ9ULJ8 1098 aa13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 NOL7Q9UMY1 257 aaKnown RBP13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 MORC2Q9Y6X9 1032 aaPredicted RBP13.39□□□□□ -0.27
AC009404.1-202ENST00000439955 FIBPO43427 364 aa13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 ITGB8P26012 769 aa13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 ADCY7P51828 1080 aa13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 MRPL12P52815 198 aaKnown RBP13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 NR5A1Q13285 461 aa13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 FOXD4L6Q3SYB3 417 aaPredicted RBP13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 FOXD4L3Q6VB84 417 aaPredicted RBP13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 KRT25Q7Z3Z0 450 aa13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 NPLOC4Q8TAT6 608 aa13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 LEO1Q8WVC0 666 aaPredicted RBP13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 CUL5Q93034 780 aa13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 KIFC2Q96AC6 838 aa13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 CHAMP1Q96JM3 812 aa13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 SPATA32Q96LK8 384 aa13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 USP28Q96RU2 1077 aa13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 TANGO6Q9C0B7 1094 aa13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 RCOR1Q9UKL0 485 aa13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 PCDHA1Q9Y5I3 950 aa13.38□□□□□ -0.27
AC009404.1-202ENST00000439955 RLFQ13129 1914 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 USP17L15C9J2P7 530 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 USP17L13C9JLJ4 530 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 KBTBD13C9JR72 458 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 USP17L11C9JVI0 530 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 USP17L18D6R9N7 530 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 USP17L22D6RA61 530 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 USP17L17D6RBQ6 530 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 USP17L19D6RCP7 530 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 USP17L20D6RJB6 530 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 MSCO60682 206 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 CNMDO75829 334 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 BMP15O95972 392 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 ADCYAP1R1P41586 468 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 USP17L24Q0WX57 530 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 REXO1Q8N1G1 1221 aaKnown RBP13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 KCNG4Q8TDN1 519 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 ADAMTS19Q8TE59 1207 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 TFIP11Q9UBB9 837 aaKnown RBP13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 PCDHA6Q9UN73 950 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 CEP131Q9UPN4 1083 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 PCDHA8Q9Y5H6 950 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 ABCB11O95342 1321 aa13.37□□□□□ -0.27
AC009404.1-202ENST00000439955 A0A0G2JMZ2 1700 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 CCDC194A0A1B0GVG4 234 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 PRPF40AO75400 957 aaKnown RBP13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 FLOT1O75955 427 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 MBD3O95983 291 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 ICAM1P05362 532 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 PTPREP23469 700 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 DNAJB2P25686 324 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 CLK2P49760 499 aaKnown RBP13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 OAZ1P54368 228 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 UBE2HP62256 183 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 CATSPERGQ6ZRH7 1159 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 LINC00301Q8NCQ3 95 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 ARRDC4Q8NCT1 418 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 PSTPIP2Q9H939 334 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 SLC38A10Q9HBR0 1119 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 FBXO28Q9NVF7 368 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 ADAMTS5Q9UNA0 930 aa13.36□□□□□ -0.27
AC009404.1-202ENST00000439955 FRMPD3Q5JV73 1810 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 SLC15A5A6NIM6 579 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 PIK3CDO00329 1044 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 ATP2A1O14983 1001 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 PPP6R2O75170 966 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 CYBAP13498 195 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 TOB1P50616 345 aaPredicted RBP13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 TLE2Q04725 743 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 AP3B2Q13367 1082 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 ORC2Q13416 577 aaPredicted RBP13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 COG2Q14746 738 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 SLC39A14Q15043 492 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 STK38Q15208 465 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 NONOQ15233 471 aaKnown RBP eCLIP13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 CCDC85BQ15834 202 aaPredicted RBP13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 PIK3AP1Q6ZUJ8 805 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 SAMD3Q8N6K7 520 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 ASB2Q96Q27 587 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 MAF1Q9H063 256 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 GDPD2Q9HCC8 539 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 HOXC10Q9NYD6 342 aa13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 MRPL11Q9Y3B7 192 aaKnown RBP13.35□□□□□ -0.27
AC009404.1-202ENST00000439955 VWA5AO00534 786 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms