RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 NTRK3Q16288 839 aa20.32■□□□□ 0.84
CCDC188-201ENST00000439765 UBE2SQ16763 222 aa20.32■□□□□ 0.84
CCDC188-201ENST00000439765 CCSAPQ6IQ19 270 aaPredicted RBP20.32■□□□□ 0.84
CCDC188-201ENST00000439765 TLK2Q86UE8 772 aa20.32■□□□□ 0.84
CCDC188-201ENST00000439765 SAMD3Q8N6K7 520 aa20.32■□□□□ 0.84
CCDC188-201ENST00000439765 SLC26A6Q9BXS9 759 aa20.32■□□□□ 0.84
CCDC188-201ENST00000439765 PSTPIP2Q9H939 334 aa20.32■□□□□ 0.84
CCDC188-201ENST00000439765 MEIS2O14770 477 aa20.31■□□□□ 0.84
CCDC188-201ENST00000439765 MYCLP12524 364 aaPredicted RBP20.31■□□□□ 0.84
CCDC188-201ENST00000439765 SCG2P13521 617 aa20.31■□□□□ 0.84
CCDC188-201ENST00000439765 ACLYP53396 1101 aa20.31■□□□□ 0.84
CCDC188-201ENST00000439765 TLE2Q04725 743 aa20.31■□□□□ 0.84
CCDC188-201ENST00000439765 PGM5Q15124 567 aa20.31■□□□□ 0.84
CCDC188-201ENST00000439765 IWS1Q96ST2 819 aa20.31■□□□□ 0.84
CCDC188-201ENST00000439765 PDCD2LQ9BRP1 358 aa20.31■□□□□ 0.84
CCDC188-201ENST00000439765 UPF3AQ9H1J1 476 aaKnown RBP20.31■□□□□ 0.84
CCDC188-201ENST00000439765 LAMA2P24043 3122 aaKnown RBP20.31■□□□□ 0.84
CCDC188-201ENST00000439765 PIK3CDO00329 1044 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 CPLX1O14810 134 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 NR3C2P08235 984 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 IFNAR1P17181 557 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 NKX3-2P78367 333 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 ANKRD1Q15327 319 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 STXBP2Q15833 593 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 PFKFB3Q16875 520 aaPredicted RBP20.3■□□□□ 0.84
CCDC188-201ENST00000439765 PPP1R18Q6NYC8 613 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 SEPT14Q6ZU15 432 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 WDR11Q9BZH6 1224 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 PRDM5Q9NQX1 630 aaPredicted RBP20.3■□□□□ 0.84
CCDC188-201ENST00000439765 BARHL2Q9NY43 387 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 GNEQ9Y223 722 aaKnown RBP20.3■□□□□ 0.84
CCDC188-201ENST00000439765 hCG_1984214I3L0E3 225 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 GJA9P57773 515 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 AKAP17AQ02040 695 aaKnown RBP20.3■□□□□ 0.84
CCDC188-201ENST00000439765 IQSEC1Q6DN90 963 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 ZNF713Q8N859 430 aaPredicted RBP20.3■□□□□ 0.84
CCDC188-201ENST00000439765 SCFD2Q8WU76 684 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 ZFP91Q96JP5 570 aaPredicted RBP20.3■□□□□ 0.84
CCDC188-201ENST00000439765 RNF26Q9BY78 433 aaPredicted RBP20.3■□□□□ 0.84
CCDC188-201ENST00000439765 SPC25Q9HBM1 224 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 STARD7Q9NQZ5 370 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 FRMPD4Q14CM0 1322 aa20.3■□□□□ 0.84
CCDC188-201ENST00000439765 PRPF3O43395 683 aaKnown RBP20.29■□□□□ 0.84
CCDC188-201ENST00000439765 CD2BP2O95400 341 aaKnown RBP20.29■□□□□ 0.84
CCDC188-201ENST00000439765 LARGE1O95461 756 aa20.29■□□□□ 0.84
CCDC188-201ENST00000439765 ADCY7P51828 1080 aa20.29■□□□□ 0.84
CCDC188-201ENST00000439765 BEX3Q00994 111 aa20.29■□□□□ 0.84
CCDC188-201ENST00000439765 SCRN1Q12765 414 aa20.29■□□□□ 0.84
CCDC188-201ENST00000439765 PKN1Q16512 942 aa20.29■□□□□ 0.84
CCDC188-201ENST00000439765 DUSP28Q4G0W2 176 aa20.29■□□□□ 0.84
CCDC188-201ENST00000439765 ANKRD33Q7Z3H0 272 aa20.29■□□□□ 0.84
CCDC188-201ENST00000439765 SH3RF1Q7Z6J0 888 aa20.29■□□□□ 0.84
CCDC188-201ENST00000439765 PCSK9Q8NBP7 692 aaKnown RBP20.29■□□□□ 0.84
CCDC188-201ENST00000439765 SNX21Q969T3 373 aa20.29■□□□□ 0.84
CCDC188-201ENST00000439765 TOX2Q96NM4 488 aa20.29■□□□□ 0.84
CCDC188-201ENST00000439765 SLKQ9H2G2 1235 aaPredicted RBP20.29■□□□□ 0.84
CCDC188-201ENST00000439765 TRIM43BA6NCK2 446 aa20.28■□□□□ 0.84
CCDC188-201ENST00000439765 ELP1O95163 1332 aa20.28■□□□□ 0.84
CCDC188-201ENST00000439765 ARIH2O95376 493 aa20.28■□□□□ 0.84
CCDC188-201ENST00000439765 CLTBP09497 229 aa20.28■□□□□ 0.84
CCDC188-201ENST00000439765 COL6A3P12111 3177 aa20.28■□□□□ 0.84
CCDC188-201ENST00000439765 CCND2P30279 289 aa20.28■□□□□ 0.84
CCDC188-201ENST00000439765 KCNA10Q16322 511 aa20.28■□□□□ 0.84
CCDC188-201ENST00000439765 TRIM22Q8IYM9 498 aa20.28■□□□□ 0.84
CCDC188-201ENST00000439765 TRIM43Q96BQ3 446 aaPredicted RBP20.28■□□□□ 0.84
CCDC188-201ENST00000439765 RBM47A0AV96 593 aaKnown RBP20.27■□□□□ 0.84
CCDC188-201ENST00000439765 SPDYE3A6NKU9 549 aa20.27■□□□□ 0.84
CCDC188-201ENST00000439765 KIAA0355O15063 1070 aa20.27■□□□□ 0.84
CCDC188-201ENST00000439765 CTAGE5O15320 804 aa20.27■□□□□ 0.84
CCDC188-201ENST00000439765 DYNC1LI2O43237 492 aaPredicted RBP20.27■□□□□ 0.84
CCDC188-201ENST00000439765 DTNBO60941 627 aa20.27■□□□□ 0.84
CCDC188-201ENST00000439765 TXNP10599 105 aaKnown RBP20.27■□□□□ 0.84
CCDC188-201ENST00000439765 MCM2P49736 904 aa20.27■□□□□ 0.84
CCDC188-201ENST00000439765 TTLL4Q14679 1199 aa20.27■□□□□ 0.84
CCDC188-201ENST00000439765 GNASQ5JWF2 1037 aa20.27■□□□□ 0.84
CCDC188-201ENST00000439765 COPS5Q92905 334 aa20.27■□□□□ 0.84
CCDC188-201ENST00000439765 GLT1D1Q96MS3 346 aa20.27■□□□□ 0.84
CCDC188-201ENST00000439765 AP5M1Q9H0R1 490 aa20.27■□□□□ 0.84
CCDC188-201ENST00000439765 SMCO2A6NFE2 343 aa20.26■□□□□ 0.83
CCDC188-201ENST00000439765 PFKFB2O60825 505 aa20.26■□□□□ 0.83
CCDC188-201ENST00000439765 EIF3JO75822 258 aaKnown RBP20.26■□□□□ 0.83
CCDC188-201ENST00000439765 ASGR1P07306 291 aa20.26■□□□□ 0.83
CCDC188-201ENST00000439765 SSRP1Q08945 709 aaKnown RBP20.26■□□□□ 0.83
CCDC188-201ENST00000439765 FSCN1Q16658 493 aaKnown RBP20.26■□□□□ 0.83
CCDC188-201ENST00000439765 CPLX2Q6PUV4 134 aaKnown RBP20.26■□□□□ 0.83
CCDC188-201ENST00000439765 NECAB1Q8N987 351 aa20.26■□□□□ 0.83
CCDC188-201ENST00000439765 BADQ92934 168 aa20.26■□□□□ 0.83
CCDC188-201ENST00000439765 PGBD1Q96JS3 809 aa20.26■□□□□ 0.83
CCDC188-201ENST00000439765 RIC8AQ9NPQ8 531 aa20.26■□□□□ 0.83
CCDC188-201ENST00000439765 MYO9BQ13459 2157 aa20.25■□□□□ 0.83
CCDC188-201ENST00000439765 PQBP1O60828 265 aaKnown RBP20.25■□□□□ 0.83
CCDC188-201ENST00000439765 RGS20O76081 388 aa20.25■□□□□ 0.83
CCDC188-201ENST00000439765 ANP32AP39687 249 aaKnown RBP20.25■□□□□ 0.83
CCDC188-201ENST00000439765 ME3Q16798 604 aa20.25■□□□□ 0.83
CCDC188-201ENST00000439765 VSIG10LQ86VR7 867 aa20.25■□□□□ 0.83
CCDC188-201ENST00000439765 OR6J1Q8NGC5 347 aa20.25■□□□□ 0.83
CCDC188-201ENST00000439765 VPS54Q9P1Q0 977 aa20.25■□□□□ 0.83
CCDC188-201ENST00000439765 LIMCH1Q9UPQ0 1083 aa20.25■□□□□ 0.83
CCDC188-201ENST00000439765 MRVI1Q9Y6F6 885 aa20.25■□□□□ 0.83
CCDC188-201ENST00000439765 MROH7Q68CQ1 1323 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms