RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 KCNK18Q7Z418 384 aa17.08■□□□□ 0.33
APP-208ENST00000439274 NEDD1Q8NHV4 660 aa17.08■□□□□ 0.33
APP-208ENST00000439274 AFAP1L1Q8TED9 768 aa17.08■□□□□ 0.33
APP-208ENST00000439274 MTMR9Q96QG7 549 aa17.08■□□□□ 0.33
APP-208ENST00000439274 TSGA10Q9BZW7 698 aa17.08■□□□□ 0.33
APP-208ENST00000439274 QTRT2Q9H974 415 aaKnown RBP17.08■□□□□ 0.33
APP-208ENST00000439274 DDX60LQ5H9U9 1706 aaKnown RBP17.08■□□□□ 0.32
APP-208ENST00000439274 AGPSO00116 658 aa17.08■□□□□ 0.32
APP-208ENST00000439274 RPS6KA4O75676 772 aa17.08■□□□□ 0.32
APP-208ENST00000439274 UNC13DQ70J99 1090 aa17.08■□□□□ 0.32
APP-208ENST00000439274 TRIM58Q8NG06 486 aa17.08■□□□□ 0.32
APP-208ENST00000439274 LARP4BQ92615 738 aaKnown RBP17.08■□□□□ 0.32
APP-208ENST00000439274 GJA10Q969M2 543 aa17.08■□□□□ 0.32
APP-208ENST00000439274 LRRC1Q9BTT6 524 aa17.08■□□□□ 0.32
APP-208ENST00000439274 DMGDHQ9UI17 866 aaKnown RBP17.08■□□□□ 0.32
APP-208ENST00000439274 SALL4Q9UJQ4 1053 aa17.08■□□□□ 0.32
APP-208ENST00000439274 JRKLQ9Y4A0 524 aa17.08■□□□□ 0.32
APP-208ENST00000439274 AKR1B10O60218 316 aa17.07■□□□□ 0.32
APP-208ENST00000439274 USO1O60763 962 aaKnown RBP17.07■□□□□ 0.32
APP-208ENST00000439274 TACC1O75410 805 aa17.07■□□□□ 0.32
APP-208ENST00000439274 HNRNPH3P31942 346 aaKnown RBP17.07■□□□□ 0.32
APP-208ENST00000439274 PPP1R2P41236 205 aa17.07■□□□□ 0.32
APP-208ENST00000439274 SLC7A5Q01650 507 aa17.07■□□□□ 0.32
APP-208ENST00000439274 CDK5RAP3Q96JB5 506 aa17.07■□□□□ 0.32
APP-208ENST00000439274 CRACR2AQ9BSW2 395 aa17.07■□□□□ 0.32
APP-208ENST00000439274 IVLP07476 585 aa17.07■□□□□ 0.32
APP-208ENST00000439274 NT5C2P49902 561 aa17.07■□□□□ 0.32
APP-208ENST00000439274 MAN2A1Q16706 1144 aa17.07■□□□□ 0.32
APP-208ENST00000439274 COBLL1Q53SF7 1204 aa17.07■□□□□ 0.32
APP-208ENST00000439274 ZNF804AQ7Z570 1209 aa17.07■□□□□ 0.32
APP-208ENST00000439274 CLEC10AQ8IUN9 316 aa17.07■□□□□ 0.32
APP-208ENST00000439274 RPS6KA5O75582 802 aa17.06■□□□□ 0.32
APP-208ENST00000439274 LDHCP07864 332 aa17.06■□□□□ 0.32
APP-208ENST00000439274 EIF6P56537 245 aaKnown RBP17.06■□□□□ 0.32
APP-208ENST00000439274 GFPT1Q06210 699 aaPredicted RBP17.06■□□□□ 0.32
APP-208ENST00000439274 GOLGA6L1Q8N7Z2 621 aa17.06■□□□□ 0.32
APP-208ENST00000439274 ARHGEF1Q92888 912 aaKnown RBP17.06■□□□□ 0.32
APP-208ENST00000439274 UIMC1Q96RL1 719 aa17.06■□□□□ 0.32
APP-208ENST00000439274 ZNF287Q9HBT7 754 aa17.06■□□□□ 0.32
APP-208ENST00000439274 LEMD3Q9Y2U8 911 aa17.06■□□□□ 0.32
APP-208ENST00000439274 MYH10P35580 1976 aa17.06■□□□□ 0.32
APP-208ENST00000439274 COL24A1Q17RW2 1714 aa17.06■□□□□ 0.32
APP-208ENST00000439274 GRAPQ13588 217 aa17.06■□□□□ 0.32
APP-208ENST00000439274 SKIDA1Q1XH10 827 aa17.06■□□□□ 0.32
APP-208ENST00000439274 LRRC55Q6ZSA7 311 aa17.06■□□□□ 0.32
APP-208ENST00000439274 LRRC47Q8N1G4 583 aaKnown RBP17.06■□□□□ 0.32
APP-208ENST00000439274 SPATA4Q8NEY3 305 aa17.06■□□□□ 0.32
APP-208ENST00000439274 GRAPLQ8TC17 118 aaPredicted RBP17.06■□□□□ 0.32
APP-208ENST00000439274 SNX29Q8TEQ0 813 aa17.06■□□□□ 0.32
APP-208ENST00000439274 AENQ8WTP8 325 aaKnown RBP17.06■□□□□ 0.32
APP-208ENST00000439274 BAP1Q92560 729 aa17.06■□□□□ 0.32
APP-208ENST00000439274 OSBPL9Q96SU4 736 aa17.06■□□□□ 0.32
APP-208ENST00000439274 RSPH14Q9UHP6 348 aa17.06■□□□□ 0.32
APP-208ENST00000439274 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
APP-208ENST00000439274 ECM1Q16610 540 aa17.05■□□□□ 0.32
APP-208ENST00000439274 SND1Q7KZF4 910 aaKnown RBP eCLIP17.05■□□□□ 0.324e-8■■■□□ 18.6
APP-208ENST00000439274 TMC4Q7Z404 712 aa17.05■□□□□ 0.32
APP-208ENST00000439274 RAD54LQ92698 747 aa17.05■□□□□ 0.32
APP-208ENST00000439274 DDX12PQ92771 950 aa17.05■□□□□ 0.32
APP-208ENST00000439274 TANGO6Q9C0B7 1094 aa17.05■□□□□ 0.32
APP-208ENST00000439274 ANKRD65E5RJM6 399 aa17.05■□□□□ 0.32
APP-208ENST00000439274 BUB1O43683 1085 aa17.05■□□□□ 0.32
APP-208ENST00000439274 MAGEA1P43355 309 aa17.05■□□□□ 0.32
APP-208ENST00000439274 GPSM2P81274 684 aa17.05■□□□□ 0.32
APP-208ENST00000439274 IQCEQ6IPM2 695 aa17.05■□□□□ 0.32
APP-208ENST00000439274 GUF1Q8N442 669 aaKnown RBP17.05■□□□□ 0.32
APP-208ENST00000439274 MMGT1Q8N4V1 131 aa17.05■□□□□ 0.32
APP-208ENST00000439274 STK17AQ9UEE5 414 aa17.05■□□□□ 0.32
APP-208ENST00000439274 CCNL1Q9UK58 526 aaPredicted RBP17.05■□□□□ 0.32
APP-208ENST00000439274 PVALEFA0A1B0GWK0 134 aa17.04■□□□□ 0.32
APP-208ENST00000439274 PDHBP11177 359 aa17.04■□□□□ 0.32
APP-208ENST00000439274 SLC1A4P43007 532 aa17.04■□□□□ 0.32
APP-208ENST00000439274 TNNI2P48788 182 aa17.04■□□□□ 0.32
APP-208ENST00000439274 FXR2P51116 673 aaKnown RBP eCLIP17.04■□□□□ 0.324e-13■■□□□ 11.5
APP-208ENST00000439274 RASSF7Q02833 373 aa17.04■□□□□ 0.32
APP-208ENST00000439274 UBE2SQ16763 222 aa17.04■□□□□ 0.32
APP-208ENST00000439274 MTMR8Q96EF0 704 aa17.04■□□□□ 0.32
APP-208ENST00000439274 TRIM34Q9BYJ4 488 aa17.04■□□□□ 0.32
APP-208ENST00000439274 RIOX1Q9H6W3 641 aa17.04■□□□□ 0.32
APP-208ENST00000439274 NLRC4Q9NPP4 1024 aa17.04■□□□□ 0.32
APP-208ENST00000439274 FAM184BQ9ULE4 1060 aa17.04■□□□□ 0.32
APP-208ENST00000439274 CDK5RAP2Q96SN8 1893 aa17.04■□□□□ 0.32
APP-208ENST00000439274 GPR75-ASB3A0A0A6YYF3 556 aa17.04■□□□□ 0.32
APP-208ENST00000439274 LCA5LO95447 670 aa17.04■□□□□ 0.32
APP-208ENST00000439274 ADCY7P51828 1080 aa17.04■□□□□ 0.32
APP-208ENST00000439274 RHBDL3P58872 404 aa17.04■□□□□ 0.32
APP-208ENST00000439274 APBA1Q02410 837 aa17.04■□□□□ 0.32
APP-208ENST00000439274 TMEM266Q2M3C6 531 aa17.04■□□□□ 0.32
APP-208ENST00000439274 CD209Q9NNX6 404 aa17.04■□□□□ 0.32
APP-208ENST00000439274 GPCPD1Q9NPB8 672 aa17.04■□□□□ 0.32
APP-208ENST00000439274 RTCBQ9Y3I0 505 aaKnown RBP17.04■□□□□ 0.32
APP-208ENST00000439274 GOLGA6BA6NDN3 693 aa17.03■□□□□ 0.32
APP-208ENST00000439274 KCNMA1Q12791 1236 aa17.03■□□□□ 0.32
APP-208ENST00000439274 PDXDC1Q6P996 788 aa17.03■□□□□ 0.32
APP-208ENST00000439274 CACNA2D4Q7Z3S7 1137 aa17.03■□□□□ 0.32
APP-208ENST00000439274 CCDC84Q86UT8 332 aaPredicted RBP17.03■□□□□ 0.32
APP-208ENST00000439274 BBXQ8WY36 941 aaPredicted RBP17.03■□□□□ 0.32
APP-208ENST00000439274 FGFBP2Q9BYJ0 223 aa17.03■□□□□ 0.32
APP-208ENST00000439274 RASSF4Q9H2L5 321 aa17.03■□□□□ 0.32
APP-208ENST00000439274 KANSL2Q9H9L4 492 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms