RNA–Protein interactions for RNA: ENST00000438265.5

RPE-211, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-211ENST00000438265 HIPK3Q9H422 1215 aa9.62□□□□□ -0.87
RPE-211ENST00000438265 RAPGEFL1Q9UHV5 662 aa9.62□□□□□ -0.87
RPE-211ENST00000438265 MROH7Q68CQ1 1323 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 SH2B2O14492 632 aaPredicted RBP9.61□□□□□ -0.87
RPE-211ENST00000438265 PRC1O43663 620 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 PPP1R11O60927 126 aaPredicted RBP9.61□□□□□ -0.87
RPE-211ENST00000438265 CALM1P0DP23 149 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 CALM2P0DP24 149 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 CALM3P0DP25 149 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 ANTXR2P58335 489 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 HIC1Q14526 733 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 USH1GQ495M9 461 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 TMEM67Q5HYA8 995 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 DHX32Q7L7V1 743 aaKnown RBP9.61□□□□□ -0.87
RPE-211ENST00000438265 TMCO2Q7Z6W1 182 aaPredicted RBP9.61□□□□□ -0.87
RPE-211ENST00000438265 STAG2Q8N3U4 1231 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 IL27Q8NEV9 243 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 TAAR1Q96RJ0 339 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 WDR11Q9BZH6 1224 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 TM6SF1Q9BZW5 370 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 SENP2Q9HC62 589 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 VTA1Q9NP79 307 aa9.61□□□□□ -0.87
RPE-211ENST00000438265 TMEM265A0A087WTH1 108 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 MYL3P08590 195 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 PARP1P09874 1014 aaKnown RBP9.6□□□□□ -0.87
RPE-211ENST00000438265 SMARCA1P28370 1054 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 KIF5BP33176 963 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 EXOSC10Q01780 885 aaKnown RBP9.6□□□□□ -0.87
RPE-211ENST00000438265 TROAPQ12815 778 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 TRAF1Q13077 416 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 PPP2R5BQ15173 497 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 CCDC85BQ15834 202 aaPredicted RBP9.6□□□□□ -0.87
RPE-211ENST00000438265 NBPF20Q3BBV1 942 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 CCDC62Q6P9F0 684 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 DEFB128Q7Z7B8 93 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 CATIPQ7Z7H3 387 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 RASEFQ8IZ41 740 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 OR6J1Q8NGC5 347 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 DHX38Q92620 1227 aaKnown RBP9.6□□□□□ -0.87
RPE-211ENST00000438265 WNT8BQ93098 351 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 ZFP91Q96JP5 570 aaPredicted RBP9.6□□□□□ -0.87
RPE-211ENST00000438265 AGXT2Q9BYV1 514 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 OSBPL7Q9BZF2 842 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 AP5M1Q9H0R1 490 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 BCAS3Q9H6U6 928 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 LY9Q9HBG7 655 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 SPC25Q9HBM1 224 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 TELO2Q9Y4R8 837 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 SNX14Q9Y5W7 946 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 NID2Q14112 1375 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 EVPLQ92817 2033 aa9.6□□□□□ -0.87
RPE-211ENST00000438265 BDP1A6H8Y1 2624 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 CCDC69A6NI79 296 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 FGBP02675 491 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 GNAQP50148 359 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 GRM4Q14833 912 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 LY6KQ17RY6 165 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 C8orf34Q49A92 452 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 BLOC1S2Q6QNY1 142 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 RNF207Q6ZRF8 634 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 ZNF654Q8IZM8 581 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 TMEM199Q8N511 208 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 IL31RAQ8NI17 732 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 KAT2BQ92831 832 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 GPKOWQ92917 476 aaPredicted RBP eCLIP9.59□□□□□ -0.87
RPE-211ENST00000438265 NECAB3Q96P71 396 aaPredicted RBP9.59□□□□□ -0.87
RPE-211ENST00000438265 LZTS2Q9BRK4 669 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 CERS4Q9HA82 394 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 Q9Y3F1 56 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 TRIOO75962 3097 aa9.59□□□□□ -0.87
RPE-211ENST00000438265 LOC102724159A0A0B4J2E5 919 aa9.58□□□□□ -0.88
RPE-211ENST00000438265 PALM3A6NDB9 673 aaPredicted RBP9.58□□□□□ -0.88
RPE-211ENST00000438265 TLR3O15455 904 aaKnown RBP9.58□□□□□ -0.88
RPE-211ENST00000438265 SORBS3O60504 671 aa9.58□□□□□ -0.88
RPE-211ENST00000438265 RGS20O76081 388 aa9.58□□□□□ -0.88
RPE-211ENST00000438265 TFF2Q03403 129 aa9.58□□□□□ -0.88
RPE-211ENST00000438265 ARHGAP1Q07960 439 aa9.58□□□□□ -0.88
RPE-211ENST00000438265 PWP2Q15269 919 aaKnown RBP9.58□□□□□ -0.88
RPE-211ENST00000438265 CDC37Q16543 378 aaPredicted RBP9.58□□□□□ -0.88
RPE-211ENST00000438265 QRICH1Q2TAL8 776 aa9.58□□□□□ -0.88
RPE-211ENST00000438265 ADCK5Q3MIX3 580 aa9.58□□□□□ -0.88
RPE-211ENST00000438265 GDF6Q6KF10 455 aaPredicted RBP9.58□□□□□ -0.88
RPE-211ENST00000438265 PSRC1Q6PGN9 363 aaPredicted RBP9.58□□□□□ -0.88
RPE-211ENST00000438265 ADGRF4Q8IZF3 695 aa9.58□□□□□ -0.88
RPE-211ENST00000438265 CTCFLQ8NI51 663 aaPredicted RBP9.58□□□□□ -0.88
RPE-211ENST00000438265 SYTL5Q8TDW5 730 aaPredicted RBP9.58□□□□□ -0.88
RPE-211ENST00000438265 AFG1LQ8WV93 481 aa9.58□□□□□ -0.88
RPE-211ENST00000438265 JAKMIP1Q96N16 626 aaKnown RBP9.58□□□□□ -0.88
RPE-211ENST00000438265 JMJD4Q9H9V9 463 aa9.58□□□□□ -0.88
RPE-211ENST00000438265 ZSWIM6Q9HCJ5 1215 aa9.58□□□□□ -0.88
RPE-211ENST00000438265 MAD2L2Q9UI95 211 aa9.58□□□□□ -0.88
RPE-211ENST00000438265 RALGAPA2Q2PPJ7 1873 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 LCHNA4D1U4 455 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 A6NJR5 290 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 CABYRO75952 493 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 RPS6KB1P23443 525 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 EVCP57679 992 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 ZNF200P98182 395 aaPredicted RBP9.57□□□□□ -0.88
RPE-211ENST00000438265 TRAF7Q6Q0C0 670 aa9.57□□□□□ -0.88
RPE-211ENST00000438265 APOA5Q6Q788 366 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms