RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 GPR153Q6NV75 609 aa23.35■■□□□ 1.33
LMBR1-208ENST00000434278 TMTC3Q6ZXV5 915 aa23.35■■□□□ 1.33
LMBR1-208ENST00000434278 VSIG10LQ86VR7 867 aa23.35■■□□□ 1.33
LMBR1-208ENST00000434278 MICU3Q86XE3 530 aa23.35■■□□□ 1.33
LMBR1-208ENST00000434278 AFG1LQ8WV93 481 aa23.35■■□□□ 1.33
LMBR1-208ENST00000434278 KCNB2Q92953 911 aa23.35■■□□□ 1.33
LMBR1-208ENST00000434278 ZFP91Q96JP5 570 aaPredicted RBP23.35■■□□□ 1.33
LMBR1-208ENST00000434278 SEC63Q9UGP8 760 aaKnown RBP23.35■■□□□ 1.33
LMBR1-208ENST00000434278 BRPF3Q9ULD4 1205 aa23.35■■□□□ 1.33
LMBR1-208ENST00000434278 APOA5Q6Q788 366 aa23.34■■□□□ 1.33
LMBR1-208ENST00000434278 CCDC82Q8N4S0 544 aa23.34■■□□□ 1.33
LMBR1-208ENST00000434278 PPP1R13LQ8WUF5 828 aa23.34■■□□□ 1.33
LMBR1-208ENST00000434278 ALDH8A1Q9H2A2 487 aaPredicted RBP23.34■■□□□ 1.33
LMBR1-208ENST00000434278 MRVI1Q9Y6F6 885 aa23.34■■□□□ 1.33
LMBR1-208ENST00000434278 SCN10AQ9Y5Y9 1956 aa23.34■■□□□ 1.33
LMBR1-208ENST00000434278 hCG_1642624A0A1W2PR95 340 aa23.33■■□□□ 1.33
LMBR1-208ENST00000434278 KPNA6O60684 536 aa23.33■■□□□ 1.33
LMBR1-208ENST00000434278 MMP3P08254 477 aa23.33■■□□□ 1.33
LMBR1-208ENST00000434278 CYP2C18P33260 490 aa23.33■■□□□ 1.33
LMBR1-208ENST00000434278 HSPA4P34932 840 aa23.33■■□□□ 1.33
LMBR1-208ENST00000434278 UMODL1Q5DID0 1318 aa23.33■■□□□ 1.32
LMBR1-208ENST00000434278 CPA1P15085 419 aa23.32■■□□□ 1.32
LMBR1-208ENST00000434278 CCND2P30279 289 aa23.32■■□□□ 1.32
LMBR1-208ENST00000434278 NBPF20Q3BBV1 942 aa23.32■■□□□ 1.32
LMBR1-208ENST00000434278 USP17L6PQ6QN14 398 aa23.32■■□□□ 1.32
LMBR1-208ENST00000434278 SYNE3Q6ZMZ3 975 aa23.32■■□□□ 1.32
LMBR1-208ENST00000434278 Q7L0L9 218 aa23.32■■□□□ 1.32
LMBR1-208ENST00000434278 TRMT13Q9NUP7 481 aaKnown RBP23.32■■□□□ 1.32
LMBR1-208ENST00000434278 SNX14Q9Y5W7 946 aa23.32■■□□□ 1.32
LMBR1-208ENST00000434278 FRMPD4Q14CM0 1322 aa23.32■■□□□ 1.32
LMBR1-208ENST00000434278 MEIS2O14770 477 aa23.31■■□□□ 1.32
LMBR1-208ENST00000434278 CSF2RAP15509 400 aa23.31■■□□□ 1.32
LMBR1-208ENST00000434278 C16orf59Q7L2K0 433 aa23.31■■□□□ 1.32
LMBR1-208ENST00000434278 GPKOWQ92917 476 aaPredicted RBP eCLIP23.31■■□□□ 1.328e-11■□□□□ 8.7
LMBR1-208ENST00000434278 EMID1Q96A84 441 aaPredicted RBP23.31■■□□□ 1.32
LMBR1-208ENST00000434278 NOC4LQ9BVI4 516 aaKnown RBP23.31■■□□□ 1.32
LMBR1-208ENST00000434278 HIPK3Q9H422 1215 aa23.31■■□□□ 1.32
LMBR1-208ENST00000434278 PIK3CDO00329 1044 aa23.3■■□□□ 1.32
LMBR1-208ENST00000434278 HMGB1P09429 215 aaKnown RBP23.3■■□□□ 1.32
LMBR1-208ENST00000434278 MRPS9P82933 396 aaKnown RBP23.3■■□□□ 1.32
LMBR1-208ENST00000434278 TMEM199Q8N511 208 aa23.3■■□□□ 1.32
LMBR1-208ENST00000434278 DEFB123Q8N688 67 aa23.3■■□□□ 1.32
LMBR1-208ENST00000434278 SMARCC2Q8TAQ2 1214 aa23.3■■□□□ 1.32
LMBR1-208ENST00000434278 RNPC3Q96LT9 517 aaKnown RBP23.3■■□□□ 1.32
LMBR1-208ENST00000434278 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.3■■□□□ 1.327e-10■■■■□ 19.6
LMBR1-208ENST00000434278 KLF18A0A0U1RQI7 1052 aa23.29■■□□□ 1.32
LMBR1-208ENST00000434278 ZBTB43O43298 467 aa23.29■■□□□ 1.32
LMBR1-208ENST00000434278 SP2Q02086 613 aa23.29■■□□□ 1.32
LMBR1-208ENST00000434278 PPIGQ13427 754 aaKnown RBP eCLIP23.29■■□□□ 1.321e-7■■□□□ 13.7
LMBR1-208ENST00000434278 LAMC2Q13753 1193 aa23.29■■□□□ 1.32
LMBR1-208ENST00000434278 FAM47CQ5HY64 1035 aa23.29■■□□□ 1.32
LMBR1-208ENST00000434278 NFRKBQ6P4R8 1299 aa23.29■■□□□ 1.32
LMBR1-208ENST00000434278 KCNV1Q6PIU1 500 aa23.29■■□□□ 1.32
LMBR1-208ENST00000434278 DHX37Q8IY37 1157 aaKnown RBP23.29■■□□□ 1.32
LMBR1-208ENST00000434278 KAT2BQ92831 832 aa23.29■■□□□ 1.32
LMBR1-208ENST00000434278 JAKMIP1Q96N16 626 aaKnown RBP23.29■■□□□ 1.32
LMBR1-208ENST00000434278 RBM28Q9NW13 759 aaKnown RBP23.29■■□□□ 1.32
LMBR1-208ENST00000434278 PPP4R2Q9NY27 417 aa23.29■■□□□ 1.32
LMBR1-208ENST00000434278 CNTNAP5Q8WYK1 1306 aa23.29■■□□□ 1.32
LMBR1-208ENST00000434278 MYH7BA7E2Y1 1941 aa23.28■■□□□ 1.32
LMBR1-208ENST00000434278 SORBS3O60504 671 aa23.28■■□□□ 1.32
LMBR1-208ENST00000434278 REC8O95072 547 aa23.28■■□□□ 1.32
LMBR1-208ENST00000434278 ACRP10323 421 aa23.28■■□□□ 1.32
LMBR1-208ENST00000434278 CYP2C9P11712 490 aa23.28■■□□□ 1.32
LMBR1-208ENST00000434278 CASTP20810 708 aaKnown RBP23.28■■□□□ 1.32
LMBR1-208ENST00000434278 FUT2Q10981 343 aa23.28■■□□□ 1.32
LMBR1-208ENST00000434278 RTN1Q16799 776 aa23.28■■□□□ 1.32
LMBR1-208ENST00000434278 MYSM1Q5VVJ2 828 aa23.28■■□□□ 1.32
LMBR1-208ENST00000434278 CUL5Q93034 780 aa23.28■■□□□ 1.32
LMBR1-208ENST00000434278 WNT8AQ9H1J5 351 aa23.28■■□□□ 1.32
LMBR1-208ENST00000434278 FAM217BQ9NTX9 383 aaPredicted RBP23.28■■□□□ 1.32
LMBR1-208ENST00000434278 GGPS1O95749 300 aa23.27■■□□□ 1.32
LMBR1-208ENST00000434278 SUPT20HL2P0C7V6 817 aa23.27■■□□□ 1.32
LMBR1-208ENST00000434278 UBA1P22314 1058 aaKnown RBP23.27■■□□□ 1.32
LMBR1-208ENST00000434278 CCL23P55773 120 aa23.27■■□□□ 1.32
LMBR1-208ENST00000434278 CHMP4BP1P59074 171 aa23.27■■□□□ 1.32
LMBR1-208ENST00000434278 PTPN11Q06124 597 aaPredicted RBP23.27■■□□□ 1.32
LMBR1-208ENST00000434278 DGKDQ16760 1214 aa23.27■■□□□ 1.32
LMBR1-208ENST00000434278 TMEM240Q5SV17 173 aa23.27■■□□□ 1.32
LMBR1-208ENST00000434278 CELF3Q5SZQ8 465 aaKnown RBP23.27■■□□□ 1.32
LMBR1-208ENST00000434278 PPTC7Q8NI37 304 aa23.27■■□□□ 1.32
LMBR1-208ENST00000434278 BCAS3Q9H6U6 928 aa23.27■■□□□ 1.32
LMBR1-208ENST00000434278 PSTPIP2Q9H939 334 aa23.27■■□□□ 1.32
LMBR1-208ENST00000434278 RTEL1Q9NZ71 1219 aa23.27■■□□□ 1.32
LMBR1-208ENST00000434278 GOLGA8AA7E2F4 631 aa23.26■■□□□ 1.31
LMBR1-208ENST00000434278 GOLGA8BA8MQT2 603 aa23.26■■□□□ 1.31
LMBR1-208ENST00000434278 TGFB3P10600 412 aa23.26■■□□□ 1.31
LMBR1-208ENST00000434278 CDC27P30260 824 aa23.26■■□□□ 1.31
LMBR1-208ENST00000434278 HSDL1Q3SXM5 330 aa23.26■■□□□ 1.31
LMBR1-208ENST00000434278 Q6ZUG5 572 aa23.26■■□□□ 1.31
LMBR1-208ENST00000434278 HEATR3Q7Z4Q2 680 aa23.26■■□□□ 1.31
LMBR1-208ENST00000434278 INPP4AQ96PE3 977 aaPredicted RBP23.26■■□□□ 1.31
LMBR1-208ENST00000434278 IL23AQ9NPF7 189 aa23.26■■□□□ 1.31
LMBR1-208ENST00000434278 STAM2O75886 525 aa23.25■■□□□ 1.31
LMBR1-208ENST00000434278 ICAM3P32942 547 aa23.25■■□□□ 1.31
LMBR1-208ENST00000434278 FGD1P98174 961 aa23.25■■□□□ 1.31
LMBR1-208ENST00000434278 APOBRQ0VD83 1088 aa23.25■■□□□ 1.31
LMBR1-208ENST00000434278 SEMA3FQ13275 785 aa23.25■■□□□ 1.31
LMBR1-208ENST00000434278 UBE2SQ16763 222 aa23.25■■□□□ 1.31
LMBR1-208ENST00000434278 WWC2Q6AWC2 1192 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms