RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 GOLGA8CPA6NN73 597 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 GOLGA8AA7E2F4 631 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 GOLGA8BA8MQT2 603 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 SEPT4O43236 478 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 DTNBO60941 627 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 RARBP10826 455 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 MYCLP12524 364 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 PTGS1P23219 599 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 CDC27P30260 824 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 SSTR3P32745 418 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 ADD1P35611 737 aaKnown RBP6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 ADCYAP1R1P41586 468 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 ALDH5A1P51649 535 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 TNFAIP2Q03169 654 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 STK3Q13188 491 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 RTN1Q16799 776 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 APOA5Q6Q788 366 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 ADGRD1Q6QNK2 874 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 POTEBQ6S5H4 581 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 NECAB2Q7Z6G3 386 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 SGMS1Q86VZ5 419 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 FCHSD1Q86WN1 690 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 MCF2L2Q86YR7 1114 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 FBXO16Q8IX29 292 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 MSL3Q8N5Y2 521 aaKnown RBP6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 ARRDC4Q8NCT1 418 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 IL27Q8NEV9 243 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 MTMR8Q96EF0 704 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 PHOX2BQ99453 314 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 MAP3K14Q99558 947 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 LZTS2Q9BRK4 669 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 ABHD16BQ9H3Z7 469 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 C11orf49Q9H6J7 331 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 XPNPEP3Q9NQH7 507 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 PDRG1Q9NUG6 133 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 COL20A1Q9P218 1284 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 ADD3Q9UEY8 706 aaKnown RBP6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 SEC63Q9UGP8 760 aaKnown RBP6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 OGDHLQ9ULD0 1010 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 ASTN1O14525 1302 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 WDR19Q8NEZ3 1342 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 SYNGAP1Q96PV0 1343 aa6.67□□□□□ -1.34
HMGB3P24-201ENST00000433260 MYH7BA7E2Y1 1941 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 OPLAHO14841 1288 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 DYNC1LI2O43237 492 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 ADCY6O43306 1168 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 EPB41L2O43491 1005 aaKnown RBP6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 MSCO60682 206 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 AKR1A1P14550 325 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 SMPD1P17405 629 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 EIF2AK2P19525 551 aaKnown RBP6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 SMARCA1P28370 1054 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 METAP2P50579 478 aaKnown RBP eCLIP6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 TOB2Q14106 344 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 ARHGEF16Q5VV41 709 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 TAPT1Q6NXT6 567 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 USP17L6PQ6QN14 398 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 SEPT14Q6ZU15 432 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 TMTC3Q6ZXV5 915 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 HEATR3Q7Z4Q2 680 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 ANKLE1Q8NAG6 615 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 RGS22Q8NE09 1264 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 SMARCC2Q8TAQ2 1214 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 SYTL5Q8TDW5 730 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 NLRP7Q8WX94 980 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 GPKOWQ92917 476 aaPredicted RBP eCLIP6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 VTI1AQ96AJ9 217 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 TMUB1Q9BVT8 246 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 SPZ1Q9BXG8 430 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 TMEM134Q9H6X4 195 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 FAM217BQ9NTX9 383 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 RBM28Q9NW13 759 aaKnown RBP6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 PCDH10Q9P2E7 1040 aa6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 SEPT9Q9UHD8 586 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P24-201ENST00000433260 MYADML2A6NDP7 307 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 B4DLN1 442 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 KBTBD13C9JR72 458 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 GCOM1H8Y6P7 765 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 SORBS3O60504 671 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 C6orf222P0C671 652 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 POLR2MP0CAP2 368 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 TXNP10599 105 aaKnown RBP6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 PDIA3P30101 505 aaKnown RBP6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 NEK4P51957 841 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 MRPL12P52815 198 aaKnown RBP6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 BEX3Q00994 111 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 TRAF1Q13077 416 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 LRRC41Q15345 812 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 STXBP2Q15833 593 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 KCNA10Q16322 511 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 C8orf34Q49A92 452 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 GNASQ5JWF2 1037 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 IQSEC1Q6DN90 963 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 NSUN6Q8TEA1 469 aaKnown RBP6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 COPS5Q92905 334 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 CUL5Q93034 780 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 PHKBQ93100 1093 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 RMDN3Q96TC7 470 aa6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 MPHOSPH6Q99547 160 aaKnown RBP6.65□□□□□ -1.34
HMGB3P24-201ENST00000433260 HTATIP2Q9BUP3 242 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms