RNA–Protein interactions for RNA: ENST00000433218.6

HOMER3-203, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,418 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-203ENST00000433218 NSUN6Q8TEA1 469 aaKnown RBP26.38■■□□□ 1.81
HOMER3-203ENST00000433218 IFIT3O14879 490 aaKnown RBP26.37■■□□□ 1.81
HOMER3-203ENST00000433218 ZBTB5O15062 677 aa26.37■■□□□ 1.81
HOMER3-203ENST00000433218 RGS20O76081 388 aa26.37■■□□□ 1.81
HOMER3-203ENST00000433218 RABGGTBP53611 331 aa26.37■■□□□ 1.81
HOMER3-203ENST00000433218 MB21D2Q8IYB1 491 aaPredicted RBP26.37■■□□□ 1.81
HOMER3-203ENST00000433218 KAT2BQ92831 832 aa26.37■■□□□ 1.81
HOMER3-203ENST00000433218 MPHOSPH6Q99547 160 aaKnown RBP26.37■■□□□ 1.81
HOMER3-203ENST00000433218 MYL10Q9BUA6 226 aa26.37■■□□□ 1.81
HOMER3-203ENST00000433218 AMNQ9BXJ7 453 aa26.37■■□□□ 1.81
HOMER3-203ENST00000433218 RBM8AQ9Y5S9 174 aaKnown RBP26.37■■□□□ 1.81
HOMER3-203ENST00000433218 MYOGP15173 224 aa26.36■■□□□ 1.81
HOMER3-203ENST00000433218 TROAPQ12815 778 aa26.36■■□□□ 1.81
HOMER3-203ENST00000433218 ARHGEF16Q5VV41 709 aa26.36■■□□□ 1.81
HOMER3-203ENST00000433218 DEFB128Q7Z7B8 93 aa26.36■■□□□ 1.81
HOMER3-203ENST00000433218 GPKOWQ92917 476 aaPredicted RBP eCLIP26.36■■□□□ 1.81
HOMER3-203ENST00000433218 COL25A1Q9BXS0 654 aaPredicted RBP26.36■■□□□ 1.81
HOMER3-203ENST00000433218 U3KPZ7 1027 aaPredicted RBP26.36■■□□□ 1.81
HOMER3-203ENST00000433218 GHRHRQ02643 423 aa26.35■■□□□ 1.81
HOMER3-203ENST00000433218 MCF2L2Q86YR7 1114 aa26.35■■□□□ 1.81
HOMER3-203ENST00000433218 RUFY2Q8WXA3 655 aa26.35■■□□□ 1.81
HOMER3-203ENST00000433218 PIBF1Q8WXW3 757 aa26.35■■□□□ 1.81
HOMER3-203ENST00000433218 NKX2-4Q9H2Z4 354 aa26.35■■□□□ 1.81
HOMER3-203ENST00000433218 MICAL3Q7RTP6 2002 aa26.34■■□□□ 1.81
HOMER3-203ENST00000433218 SIP14410 1827 aa26.34■■□□□ 1.81
HOMER3-203ENST00000433218 FGBP02675 491 aa26.34■■□□□ 1.81
HOMER3-203ENST00000433218 NR3C2P08235 984 aa26.34■■□□□ 1.81
HOMER3-203ENST00000433218 ZNF286BP0CG31 522 aa26.34■■□□□ 1.81
HOMER3-203ENST00000433218 TRDNQ13061 729 aa26.34■■□□□ 1.81
HOMER3-203ENST00000433218 STXBP2Q15833 593 aa26.34■■□□□ 1.81
HOMER3-203ENST00000433218 PDCD2LQ9BRP1 358 aa26.34■■□□□ 1.81
HOMER3-203ENST00000433218 PRDM12Q9H4Q4 367 aa26.34■■□□□ 1.81
HOMER3-203ENST00000433218 RIOX1Q9H6W3 641 aa26.34■■□□□ 1.81
HOMER3-203ENST00000433218 PCDHA1Q9Y5I3 950 aa26.34■■□□□ 1.81
HOMER3-203ENST00000433218 GH1P01241 217 aa26.33■■□□□ 1.81
HOMER3-203ENST00000433218 WTAPQ15007 396 aa26.33■■□□□ 1.81
HOMER3-203ENST00000433218 NFRKBQ6P4R8 1299 aa26.33■■□□□ 1.81
HOMER3-203ENST00000433218 RALYLQ86SE5 291 aaKnown RBP26.33■■□□□ 1.81
HOMER3-203ENST00000433218 MAP4K1Q92918 833 aa26.33■■□□□ 1.81
HOMER3-203ENST00000433218 SEZ6LQ9BYH1 1024 aa26.33■■□□□ 1.81
HOMER3-203ENST00000433218 DDX41Q9UJV9 622 aaKnown RBP26.33■■□□□ 1.81
HOMER3-203ENST00000433218 GDF6Q6KF10 455 aaPredicted RBP26.32■■□□□ 1.8
HOMER3-203ENST00000433218 NCOA7Q8NI08 942 aa26.32■■□□□ 1.8
HOMER3-203ENST00000433218 IGDCC4Q8TDY8 1250 aa26.32■■□□□ 1.8
HOMER3-203ENST00000433218 DHX38Q92620 1227 aaKnown RBP26.32■■□□□ 1.8
HOMER3-203ENST00000433218 IWS1Q96ST2 819 aa26.32■■□□□ 1.8
HOMER3-203ENST00000433218 PRDM6Q9NQX0 595 aa26.32■■□□□ 1.8
HOMER3-203ENST00000433218 MYCLP12524 364 aaPredicted RBP26.31■■□□□ 1.8
HOMER3-203ENST00000433218 PGM5Q15124 567 aa26.31■■□□□ 1.8
HOMER3-203ENST00000433218 TMEM67Q5HYA8 995 aa26.31■■□□□ 1.8
HOMER3-203ENST00000433218 LSG1Q9H089 658 aaKnown RBP26.31■■□□□ 1.8
HOMER3-203ENST00000433218 BCAS3Q9H6U6 928 aa26.31■■□□□ 1.8
HOMER3-203ENST00000433218 LY9Q9HBG7 655 aa26.31■■□□□ 1.8
HOMER3-203ENST00000433218 MRVI1Q9Y6F6 885 aa26.31■■□□□ 1.8
HOMER3-203ENST00000433218 PRRC2BQ5JSZ5 2229 aaKnown RBP26.31■■□□□ 1.8
HOMER3-203ENST00000433218 ZBBXA8MT70 800 aa26.31■■□□□ 1.8
HOMER3-203ENST00000433218 B4DLN1 442 aa26.31■■□□□ 1.8
HOMER3-203ENST00000433218 MRPL12P52815 198 aaKnown RBP26.31■■□□□ 1.8
HOMER3-203ENST00000433218 ADGRE1Q14246 886 aa26.31■■□□□ 1.8
HOMER3-203ENST00000433218 BRDTQ58F21 947 aaPredicted RBP26.31■■□□□ 1.8
HOMER3-203ENST00000433218 SP2Q02086 613 aa26.3■■□□□ 1.8
HOMER3-203ENST00000433218 BMP2KLQ5H9B9 411 aa26.3■■□□□ 1.8
HOMER3-203ENST00000433218 RAB11FIP4Q86YS3 637 aa26.3■■□□□ 1.8
HOMER3-203ENST00000433218 WNT8BQ93098 351 aa26.3■■□□□ 1.8
HOMER3-203ENST00000433218 ARHGEF15O94989 841 aa26.29■■□□□ 1.8
HOMER3-203ENST00000433218 SUPT20HL2P0C7V6 817 aa26.29■■□□□ 1.8
HOMER3-203ENST00000433218 RXRAP19793 462 aa26.29■■□□□ 1.8
HOMER3-203ENST00000433218 HIC1Q14526 733 aa26.29■■□□□ 1.8
HOMER3-203ENST00000433218 FCHSD1Q86WN1 690 aa26.29■■□□□ 1.8
HOMER3-203ENST00000433218 MAF1Q9H063 256 aa26.29■■□□□ 1.8
HOMER3-203ENST00000433218 EIF3JO75822 258 aaKnown RBP26.28■■□□□ 1.8
HOMER3-203ENST00000433218 PLEKHA8P1O95397 391 aa26.28■■□□□ 1.8
HOMER3-203ENST00000433218 UBA1P22314 1058 aaKnown RBP26.28■■□□□ 1.8
HOMER3-203ENST00000433218 GPNMBQ14956 572 aa26.28■■□□□ 1.8
HOMER3-203ENST00000433218 PTGISQ16647 500 aa26.28■■□□□ 1.8
HOMER3-203ENST00000433218 TCTN1Q2MV58 587 aa26.28■■□□□ 1.8
HOMER3-203ENST00000433218 ZNF654Q8IZM8 581 aa26.28■■□□□ 1.8
HOMER3-203ENST00000433218 TELO2Q9Y4R8 837 aa26.28■■□□□ 1.8
HOMER3-203ENST00000433218 KAT6AQ92794 2004 aa26.27■■□□□ 1.8
HOMER3-203ENST00000433218 ERICH2A1L162 156 aa26.27■■□□□ 1.8
HOMER3-203ENST00000433218 KPNA6O60684 536 aa26.27■■□□□ 1.8
HOMER3-203ENST00000433218 IQCF3P0C7M6 154 aa26.27■■□□□ 1.8
HOMER3-203ENST00000433218 HSDL1Q3SXM5 330 aa26.27■■□□□ 1.8
HOMER3-203ENST00000433218 CMTR1Q8N1G2 835 aaKnown RBP26.27■■□□□ 1.8
HOMER3-203ENST00000433218 EMID1Q96A84 441 aaPredicted RBP26.27■■□□□ 1.8
HOMER3-203ENST00000433218 ALG1Q9BT22 464 aa26.27■■□□□ 1.8
HOMER3-203ENST00000433218 LRRC2Q9BYS8 371 aa26.27■■□□□ 1.8
HOMER3-203ENST00000433218 HDAC6Q9UBN7 1215 aa26.27■■□□□ 1.8
HOMER3-203ENST00000433218 SLC4A7Q9Y6M7 1214 aa26.27■■□□□ 1.8
HOMER3-203ENST00000433218 PITPNM1O00562 1244 aa26.26■■□□□ 1.79
HOMER3-203ENST00000433218 F2P00734 622 aa26.26■■□□□ 1.79
HOMER3-203ENST00000433218 ZNF200P98182 395 aaPredicted RBP26.26■■□□□ 1.79
HOMER3-203ENST00000433218 SPRED2Q7Z698 418 aa26.26■■□□□ 1.79
HOMER3-203ENST00000433218 ESYT1Q9BSJ8 1104 aa26.26■■□□□ 1.79
HOMER3-203ENST00000433218 FRMPD4Q14CM0 1322 aa26.26■■□□□ 1.79
HOMER3-203ENST00000433218 PNMA6FA0A0J9YX94 578 aa26.25■■□□□ 1.79
HOMER3-203ENST00000433218 PRC1O43663 620 aa26.25■■□□□ 1.79
HOMER3-203ENST00000433218 GGPS1O95749 300 aa26.25■■□□□ 1.79
HOMER3-203ENST00000433218 PSEN2P49810 448 aa26.25■■□□□ 1.79
HOMER3-203ENST00000433218 PTPN11Q06124 597 aaPredicted RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms