RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 CYP2D7A0A087X1C5 515 aa12.12□□□□□ -0.47
HOXD3-203ENST00000432796 PATL2C9JE40 543 aaKnown RBP12.12□□□□□ -0.47
HOXD3-203ENST00000432796 KPNA6O60684 536 aa12.12□□□□□ -0.47
HOXD3-203ENST00000432796 KDM4AO75164 1064 aa12.12□□□□□ -0.47
HOXD3-203ENST00000432796 CBX2Q14781 532 aaPredicted RBP12.12□□□□□ -0.47
HOXD3-203ENST00000432796 PTGISQ16647 500 aa12.12□□□□□ -0.47
HOXD3-203ENST00000432796 SLFNL1Q499Z3 407 aa12.12□□□□□ -0.47
HOXD3-203ENST00000432796 BRDTQ58F21 947 aaPredicted RBP12.12□□□□□ -0.47
HOXD3-203ENST00000432796 FBXO11Q86XK2 927 aa12.12□□□□□ -0.47
HOXD3-203ENST00000432796 STK11IPQ8N1F8 1099 aa12.12□□□□□ -0.47
HOXD3-203ENST00000432796 TET1Q8NFU7 2136 aa12.12□□□□□ -0.47
HOXD3-203ENST00000432796 MORC4Q8TE76 937 aa12.12□□□□□ -0.47
HOXD3-203ENST00000432796 EVI5LQ96CN4 794 aa12.12□□□□□ -0.47
HOXD3-203ENST00000432796 PCDHB15Q9Y5E8 787 aa12.12□□□□□ -0.47
HOXD3-203ENST00000432796 PLXNA3P51805 1871 aa12.12□□□□□ -0.47
HOXD3-203ENST00000432796 RAD50Q92878 1312 aa12.11□□□□□ -0.47
HOXD3-203ENST00000432796 TRIM6-TRIM34B2RNG4 842 aa12.11□□□□□ -0.47
HOXD3-203ENST00000432796 LOC730098B7Z3J9 87 aa12.11□□□□□ -0.47
HOXD3-203ENST00000432796 TBX10O75333 385 aa12.11□□□□□ -0.47
HOXD3-203ENST00000432796 MFAP1P55081 439 aaKnown RBP12.11□□□□□ -0.47
HOXD3-203ENST00000432796 HYAL1Q12794 435 aa12.11□□□□□ -0.47
HOXD3-203ENST00000432796 HDAC1Q13547 482 aaPredicted RBP12.11□□□□□ -0.47
HOXD3-203ENST00000432796 ADSSL1Q8N142 457 aa12.11□□□□□ -0.47
HOXD3-203ENST00000432796 OR6J1Q8NGC5 347 aa12.11□□□□□ -0.47
HOXD3-203ENST00000432796 NKD2Q969F2 451 aaPredicted RBP12.11□□□□□ -0.47
HOXD3-203ENST00000432796 OSBP2Q969R2 916 aa12.11□□□□□ -0.47
HOXD3-203ENST00000432796 CTAGE1Q96RT6 745 aa12.11□□□□□ -0.47
HOXD3-203ENST00000432796 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.11□□□□□ -0.47
HOXD3-203ENST00000432796 WDR11Q9BZH6 1224 aa12.11□□□□□ -0.47
HOXD3-203ENST00000432796 RNF146Q9NTX7 359 aa12.11□□□□□ -0.47
HOXD3-203ENST00000432796 CD207Q9UJ71 328 aa12.11□□□□□ -0.47
HOXD3-203ENST00000432796 FEM1BQ9UK73 627 aa12.11□□□□□ -0.47
HOXD3-203ENST00000432796 A6NJR5 290 aa12.1□□□□□ -0.47
HOXD3-203ENST00000432796 GSG1L2A8MUP6 293 aa12.1□□□□□ -0.47
HOXD3-203ENST00000432796 EYA4O95677 639 aa12.1□□□□□ -0.47
HOXD3-203ENST00000432796 AMHP03971 560 aa12.1□□□□□ -0.47
HOXD3-203ENST00000432796 FDX1P10109 184 aa12.1□□□□□ -0.47
HOXD3-203ENST00000432796 CKBP12277 381 aa12.1□□□□□ -0.47
HOXD3-203ENST00000432796 IKQ13123 557 aaPredicted RBP12.1□□□□□ -0.47
HOXD3-203ENST00000432796 MCTP2Q6DN12 878 aa12.1□□□□□ -0.47
HOXD3-203ENST00000432796 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.1□□□□□ -0.47
HOXD3-203ENST00000432796 TMEM192Q8IY95 271 aa12.1□□□□□ -0.47
HOXD3-203ENST00000432796 IFNL3Q8IZI9 196 aa12.1□□□□□ -0.47
HOXD3-203ENST00000432796 MYOCDQ8IZQ8 938 aa12.1□□□□□ -0.47
HOXD3-203ENST00000432796 DHX38Q92620 1227 aaKnown RBP12.1□□□□□ -0.47
HOXD3-203ENST00000432796 NYAP2Q9P242 653 aa12.1□□□□□ -0.47
HOXD3-203ENST00000432796 SYNPO2Q9UMS6 1093 aa12.1□□□□□ -0.47
HOXD3-203ENST00000432796 DMXL1Q9Y485 3027 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 SCN10AQ9Y5Y9 1956 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 RBM47A0AV96 593 aaKnown RBP12.09□□□□□ -0.47
HOXD3-203ENST00000432796 TSPY2A6NKD2 308 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 M0R2C6 588 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 TTLL1O95922 423 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 PPARAQ07869 468 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
HOXD3-203ENST00000432796 TKFCQ3LXA3 575 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 DGLUCYQ7Z3D6 616 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 SESTD1Q86VW0 696 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 TICAM2Q86XR7 235 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 PI4K2BQ8TCG2 481 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 CNTNAP3BQ96NU0 1288 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 YME1L1Q96TA2 773 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 CNTNAP3Q9BZ76 1288 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 LMAN2LQ9H0V9 348 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 TOMM22Q9NS69 142 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 CYP39A1Q9NYL5 469 aa12.09□□□□□ -0.47
HOXD3-203ENST00000432796 NKRFO15226 690 aaKnown RBP eCLIP12.08□□□□□ -0.48
HOXD3-203ENST00000432796 CHGBP05060 677 aa12.08□□□□□ -0.48
HOXD3-203ENST00000432796 RASA1P20936 1047 aa12.08□□□□□ -0.48
HOXD3-203ENST00000432796 ZMYM1Q5SVZ6 1142 aa12.08□□□□□ -0.48
HOXD3-203ENST00000432796 GDF6Q6KF10 455 aaPredicted RBP12.08□□□□□ -0.48
HOXD3-203ENST00000432796 RMDN1Q96DB5 314 aa12.08□□□□□ -0.48
HOXD3-203ENST00000432796 MSLNLQ96KJ4 702 aa12.08□□□□□ -0.48
HOXD3-203ENST00000432796 TRERF1Q96PN7 1200 aa12.08□□□□□ -0.48
HOXD3-203ENST00000432796 HELLSQ9NRZ9 838 aa12.08□□□□□ -0.48
HOXD3-203ENST00000432796 CLIP2Q9UDT6 1046 aa12.08□□□□□ -0.48
HOXD3-203ENST00000432796 LGR5O75473 907 aa12.07□□□□□ -0.48
HOXD3-203ENST00000432796 PRDM1O75626 825 aa12.07□□□□□ -0.48
HOXD3-203ENST00000432796 ICAM3P32942 547 aa12.07□□□□□ -0.48
HOXD3-203ENST00000432796 NDUFV1P49821 464 aa12.07□□□□□ -0.48
HOXD3-203ENST00000432796 PDE1AP54750 535 aa12.07□□□□□ -0.48
HOXD3-203ENST00000432796 CHMP4BP1P59074 171 aa12.07□□□□□ -0.48
HOXD3-203ENST00000432796 PPP2R5BQ15173 497 aa12.07□□□□□ -0.48
HOXD3-203ENST00000432796 FRMD5Q7Z6J6 570 aa12.07□□□□□ -0.48
HOXD3-203ENST00000432796 SMRP1Q8NCR6 262 aa12.07□□□□□ -0.48
HOXD3-203ENST00000432796 RILPL2Q969X0 211 aa12.07□□□□□ -0.48
HOXD3-203ENST00000432796 ZNF292O60281 2723 aa12.07□□□□□ -0.48
HOXD3-203ENST00000432796 CHD8Q9HCK8 2581 aa12.07□□□□□ -0.48
HOXD3-203ENST00000432796 CFAP47Q6ZTR5 3102 aa12.06□□□□□ -0.48
HOXD3-203ENST00000432796 PLIN4Q96Q06 1357 aa12.06□□□□□ -0.48
HOXD3-203ENST00000432796 TPRP12270 2363 aaKnown RBP12.06□□□□□ -0.48
HOXD3-203ENST00000432796 WDR87Q6ZQQ6 2873 aa12.06□□□□□ -0.48
HOXD3-203ENST00000432796 MYH4Q9Y623 1939 aa12.06□□□□□ -0.48
HOXD3-203ENST00000432796 LOC102724159A0A0B4J2E5 919 aa12.06□□□□□ -0.48
HOXD3-203ENST00000432796 C5orf67F2Z3F1 127 aa12.06□□□□□ -0.48
HOXD3-203ENST00000432796 HIP1O00291 1037 aa12.06□□□□□ -0.48
HOXD3-203ENST00000432796 LINC01565O15544 149 aa12.06□□□□□ -0.48
HOXD3-203ENST00000432796 ALAS1P13196 640 aa12.06□□□□□ -0.48
HOXD3-203ENST00000432796 GTF2F1P35269 517 aaKnown RBP eCLIP12.06□□□□□ -0.48
HOXD3-203ENST00000432796 TFAP4Q01664 338 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms