RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 EPN1Q9Y6I3 576 aaPredicted RBP12.67□□□□□ -0.38
PTCH1-208ENST00000430669 LAMA4Q16363 1823 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 PKD1L3Q7Z443 1732 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 PLEKHA8P1O95397 391 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 TCP1P17987 556 aaKnown RBP12.67□□□□□ -0.38
PTCH1-208ENST00000430669 TNNI1P19237 187 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 RAD51AP2Q09MP3 1159 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 NFIXQ14938 502 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 IFT81Q8WYA0 676 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 KCNB2Q92953 911 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 DYNLL2Q96FJ2 89 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 TMEM47Q9BQJ4 181 aa12.67□□□□□ -0.38
PTCH1-208ENST00000430669 SYNE4Q8N205 404 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 MARCH10Q8NA82 808 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-208ENST00000430669 PRPF6O94906 941 aaKnown RBP12.66□□□□□ -0.38
PTCH1-208ENST00000430669 RUFY4Q6ZNE9 571 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 FAM20AQ96MK3 541 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 ACCSQ96QU6 501 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 NELFCDQ8IXH7 590 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 ELOA2Q8IYF1 753 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-208ENST00000430669 STAMQ92783 540 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 GLG1Q92896 1179 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 PPP1R13BQ96KQ4 1090 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 CYP2D7A0A087X1C5 515 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 U2AF2P26368 475 aaKnown RBP eCLIP12.66□□□□□ -0.38
PTCH1-208ENST00000430669 USP11P51784 963 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 SLF1Q9BQI6 1058 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 AFPP02771 609 aaKnown RBP12.66□□□□□ -0.38
PTCH1-208ENST00000430669 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 VSTM4Q8IW00 320 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 ABCB11O95342 1321 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 TNNC2P02585 160 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 ATF7P17544 494 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-208ENST00000430669 CYP2J2P51589 502 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 LONRF3Q496Y0 759 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 TAOK1Q7L7X3 1001 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 NEK9Q8TD19 979 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 GRK7Q8WTQ7 553 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 MYH9P35579 1960 aaKnown RBP12.66□□□□□ -0.38
PTCH1-208ENST00000430669 MRC1P22897 1456 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 FERP16591 822 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 NR2F2P24468 414 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 COPB2P35606 906 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 TCP11X2Q5H9J9 407 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 ODR4Q5SWX8 454 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 INTS5Q6P9B9 1019 aaKnown RBP12.66□□□□□ -0.38
PTCH1-208ENST00000430669 C11orf57Q6ZUT1 292 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-208ENST00000430669 KCTD17Q8N5Z5 321 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 HYOU1Q9Y4L1 999 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 C5P01031 1676 aa12.66□□□□□ -0.38
PTCH1-208ENST00000430669 USP54Q70EL1 1684 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 THAP12O43422 761 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 IBSPP21815 317 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-208ENST00000430669 KCNQ4P56696 695 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 ATP2C1P98194 919 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-208ENST00000430669 MYL7Q01449 175 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 FMR1NBQ8N0W7 255 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-208ENST00000430669 EIF3CLB5ME19 914 aaKnown RBP12.65□□□□□ -0.38
PTCH1-208ENST00000430669 ETF1P62495 437 aaKnown RBP12.65□□□□□ -0.38
PTCH1-208ENST00000430669 UNC13DQ70J99 1090 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 ARMC9Q7Z3E5 817 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 IGDCC4Q8TDY8 1250 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 POMGNT1Q8WZA1 660 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 EIF3CQ99613 913 aaKnown RBP12.65□□□□□ -0.38
PTCH1-208ENST00000430669 RRAGDQ9NQL2 400 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-208ENST00000430669 PLCB3Q01970 1234 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 C12orf60Q5U649 245 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 MAEAQ7L5Y9 396 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 FBXL16Q8N461 479 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 PLA2G4BP0C869 781 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 FBXO33Q7Z6M2 555 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 DDIT3P35638 169 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 GAS2L3Q86XJ1 694 aa12.65□□□□□ -0.38
PTCH1-208ENST00000430669 MAN1A1P33908 653 aa12.65□□□□□ -0.39
PTCH1-208ENST00000430669 ARMCX5Q6P1M9 558 aa12.65□□□□□ -0.39
PTCH1-208ENST00000430669 C16orf86Q6ZW13 317 aa12.65□□□□□ -0.39
PTCH1-208ENST00000430669 PPP1R14CQ8TAE6 165 aa12.65□□□□□ -0.39
PTCH1-208ENST00000430669 ADPGKQ9BRR6 497 aa12.65□□□□□ -0.39
PTCH1-208ENST00000430669 UBLCP1Q8WVY7 318 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-208ENST00000430669 RNF14Q9UBS8 474 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 SEL1LQ9UBV2 794 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 DCUN1D2Q6PH85 259 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 HHIPL2Q6UWX4 724 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 CERKQ8TCT0 537 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 CTTNBP2NLQ9P2B4 639 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 PSAPP07602 524 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 SURF1Q15526 300 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 NEDD1Q8NHV4 660 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 RNF216Q9NWF9 866 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-208ENST00000430669 TXNDC16Q9P2K2 825 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 DDX60Q8IY21 1712 aaKnown RBP12.64□□□□□ -0.39
PTCH1-208ENST00000430669 KCNQ2O43526 872 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 B4GALNT4Q76KP1 1039 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 ANO3Q9BYT9 981 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 MYH10P35580 1976 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 DOT1LQ8TEK3 1739 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 PPFIA1Q13136 1202 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 SPICE1Q8N0Z3 855 aa12.64□□□□□ -0.39
PTCH1-208ENST00000430669 RAD17O75943 681 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms