RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 GPKOWQ92917 476 aaPredicted RBP eCLIP20.9■□□□□ 0.94
SSR4P1-202ENST00000429427 VTI1AQ96AJ9 217 aa20.9■□□□□ 0.94
SSR4P1-202ENST00000429427 AGXT2Q9BYV1 514 aa20.9■□□□□ 0.94
SSR4P1-202ENST00000429427 PRKAG2Q9UGJ0 569 aa20.9■□□□□ 0.94
SSR4P1-202ENST00000429427 SEC63Q9UGP8 760 aaKnown RBP20.9■□□□□ 0.94
SSR4P1-202ENST00000429427 DDX41Q9UJV9 622 aaKnown RBP20.9■□□□□ 0.94
SSR4P1-202ENST00000429427 CABYRO75952 493 aa20.89■□□□□ 0.93
SSR4P1-202ENST00000429427 CD4P01730 458 aa20.89■□□□□ 0.93
SSR4P1-202ENST00000429427 MYCLP12524 364 aaPredicted RBP20.89■□□□□ 0.93
SSR4P1-202ENST00000429427 ITGA7Q13683 1181 aa20.89■□□□□ 0.93
SSR4P1-202ENST00000429427 RTN1Q16799 776 aa20.89■□□□□ 0.93
SSR4P1-202ENST00000429427 BLOC1S2Q6QNY1 142 aa20.89■□□□□ 0.93
SSR4P1-202ENST00000429427 TDHQ8IZJ6 230 aa20.89■□□□□ 0.93
SSR4P1-202ENST00000429427 BRF1Q92994 677 aa20.89■□□□□ 0.93
SSR4P1-202ENST00000429427 GOLGA8AA7E2F4 631 aa20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 GOLGA8BA8MQT2 603 aa20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 PIK3CDO00329 1044 aa20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 EPB41L2O43491 1005 aaKnown RBP20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 CPT1AP50416 773 aa20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 EPHB4P54760 987 aa20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 MRPS9P82933 396 aaKnown RBP20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 WWC2Q6AWC2 1192 aa20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 SYNE3Q6ZMZ3 975 aa20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 FBXL16Q8N461 479 aa20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 PPP1R13LQ8WUF5 828 aa20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 AFG1LQ8WV93 481 aa20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 LBHD1Q9BQE6 289 aaPredicted RBP20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 TMEM39AQ9NV64 488 aa20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 RBM28Q9NW13 759 aaKnown RBP20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 SCN10AQ9Y5Y9 1956 aa20.88■□□□□ 0.93
SSR4P1-202ENST00000429427 NID2Q14112 1375 aa20.87■□□□□ 0.93
SSR4P1-202ENST00000429427 DCDC2CA8MYV0 355 aa20.87■□□□□ 0.93
SSR4P1-202ENST00000429427 ZEB2O60315 1214 aa20.87■□□□□ 0.93
SSR4P1-202ENST00000429427 MYL3P08590 195 aa20.87■□□□□ 0.93
SSR4P1-202ENST00000429427 CASTP20810 708 aaKnown RBP20.87■□□□□ 0.93
SSR4P1-202ENST00000429427 ADD1P35611 737 aaKnown RBP20.87■□□□□ 0.93
SSR4P1-202ENST00000429427 RCAN1P53805 252 aa20.87■□□□□ 0.93
SSR4P1-202ENST00000429427 SP2Q02086 613 aa20.87■□□□□ 0.93
SSR4P1-202ENST00000429427 LRCH3Q96II8 777 aa20.87■□□□□ 0.93
SSR4P1-202ENST00000429427 TRPV6Q9H1D0 765 aa20.87■□□□□ 0.93
SSR4P1-202ENST00000429427 MROH7Q68CQ1 1323 aa20.86■□□□□ 0.93
SSR4P1-202ENST00000429427 GH1P01241 217 aa20.86■□□□□ 0.93
SSR4P1-202ENST00000429427 MMP3P08254 477 aa20.86■□□□□ 0.93
SSR4P1-202ENST00000429427 SEMA3FQ13275 785 aa20.86■□□□□ 0.93
SSR4P1-202ENST00000429427 UBE2SQ16763 222 aa20.86■□□□□ 0.93
SSR4P1-202ENST00000429427 C9orf50Q5SZB4 431 aa20.86■□□□□ 0.93
SSR4P1-202ENST00000429427 HEATR3Q7Z4Q2 680 aa20.86■□□□□ 0.93
SSR4P1-202ENST00000429427 BCAS3Q9H6U6 928 aa20.86■□□□□ 0.93
SSR4P1-202ENST00000429427 ZSWIM6Q9HCJ5 1215 aa20.86■□□□□ 0.93
SSR4P1-202ENST00000429427 POLR3EQ9NVU0 708 aa20.86■□□□□ 0.93
SSR4P1-202ENST00000429427 MRVI1Q9Y6F6 885 aa20.86■□□□□ 0.93
SSR4P1-202ENST00000429427 B4GALT4O60513 344 aa20.85■□□□□ 0.93
SSR4P1-202ENST00000429427 CCND2P30279 289 aa20.85■□□□□ 0.93
SSR4P1-202ENST00000429427 TOB2Q14106 344 aaPredicted RBP20.85■□□□□ 0.93
SSR4P1-202ENST00000429427 LRIT3Q3SXY7 679 aa20.85■□□□□ 0.93
SSR4P1-202ENST00000429427 KAT2BQ92831 832 aa20.85■□□□□ 0.93
SSR4P1-202ENST00000429427 EMID1Q96A84 441 aaPredicted RBP20.85■□□□□ 0.93
SSR4P1-202ENST00000429427 INPP4AQ96PE3 977 aaPredicted RBP20.85■□□□□ 0.93
SSR4P1-202ENST00000429427 MTG1Q9BT17 334 aaPredicted RBP20.85■□□□□ 0.93
SSR4P1-202ENST00000429427 PSTPIP2Q9H939 334 aa20.85■□□□□ 0.93
SSR4P1-202ENST00000429427 V9GY48 417 aaPredicted RBP20.85■□□□□ 0.93
SSR4P1-202ENST00000429427 UMODL1Q5DID0 1318 aa20.84■□□□□ 0.93
SSR4P1-202ENST00000429427 SORBS3O60504 671 aa20.84■□□□□ 0.93
SSR4P1-202ENST00000429427 TIMP1P01033 207 aa20.84■□□□□ 0.93
SSR4P1-202ENST00000429427 RAG1P15918 1043 aa20.84■□□□□ 0.93
SSR4P1-202ENST00000429427 UBA1P22314 1058 aaKnown RBP20.84■□□□□ 0.93
SSR4P1-202ENST00000429427 METAP2P50579 478 aaKnown RBP eCLIP20.84■□□□□ 0.93
SSR4P1-202ENST00000429427 EVCP57679 992 aa20.84■□□□□ 0.93
SSR4P1-202ENST00000429427 SMARCC2Q8TAQ2 1214 aa20.84■□□□□ 0.93
SSR4P1-202ENST00000429427 ALDH8A1Q9H2A2 487 aaPredicted RBP20.84■□□□□ 0.93
SSR4P1-202ENST00000429427 STXBP3O00186 592 aa20.83■□□□□ 0.93
SSR4P1-202ENST00000429427 PSMA5P28066 241 aa20.83■□□□□ 0.93
SSR4P1-202ENST00000429427 FGD1P98174 961 aa20.83■□□□□ 0.93
SSR4P1-202ENST00000429427 SHHQ15465 462 aa20.83■□□□□ 0.93
SSR4P1-202ENST00000429427 NBPF20Q3BBV1 942 aa20.83■□□□□ 0.93
SSR4P1-202ENST00000429427 MYSM1Q5VVJ2 828 aa20.83■□□□□ 0.93
SSR4P1-202ENST00000429427 RUFY3Q7L099 469 aa20.83■□□□□ 0.93
SSR4P1-202ENST00000429427 UPF3BQ9BZI7 483 aaKnown RBP20.83■□□□□ 0.93
SSR4P1-202ENST00000429427 TRMT13Q9NUP7 481 aaKnown RBP20.83■□□□□ 0.93
SSR4P1-202ENST00000429427 NAP1L2Q9ULW6 460 aaPredicted RBP20.83■□□□□ 0.93
SSR4P1-202ENST00000429427 TELO2Q9Y4R8 837 aa20.83■□□□□ 0.93
SSR4P1-202ENST00000429427 ADAMTS3O15072 1205 aa20.82■□□□□ 0.92
SSR4P1-202ENST00000429427 HOXD8P13378 290 aaPredicted RBP20.82■□□□□ 0.92
SSR4P1-202ENST00000429427 NTRK3Q16288 839 aa20.82■□□□□ 0.92
SSR4P1-202ENST00000429427 CELF3Q5SZQ8 465 aaKnown RBP20.82■□□□□ 0.92
SSR4P1-202ENST00000429427 PCNX4Q63HM2 1172 aa20.82■□□□□ 0.92
SSR4P1-202ENST00000429427 PPTC7Q8NI37 304 aa20.82■□□□□ 0.92
SSR4P1-202ENST00000429427 PPP1R12CQ9BZL4 782 aa20.82■□□□□ 0.92
SSR4P1-202ENST00000429427 RTEL1Q9NZ71 1219 aa20.82■□□□□ 0.92
SSR4P1-202ENST00000429427 PPFIA3O75145 1194 aa20.81■□□□□ 0.92
SSR4P1-202ENST00000429427 GGPS1O95749 300 aa20.81■□□□□ 0.92
SSR4P1-202ENST00000429427 PDIA3P30101 505 aaKnown RBP20.81■□□□□ 0.92
SSR4P1-202ENST00000429427 ICAM3P32942 547 aa20.81■□□□□ 0.92
SSR4P1-202ENST00000429427 CYP2C18P33260 490 aa20.81■□□□□ 0.92
SSR4P1-202ENST00000429427 HSDL1Q3SXM5 330 aa20.81■□□□□ 0.92
SSR4P1-202ENST00000429427 BRDTQ58F21 947 aaPredicted RBP20.81■□□□□ 0.92
SSR4P1-202ENST00000429427 C16orf59Q7L2K0 433 aa20.81■□□□□ 0.92
SSR4P1-202ENST00000429427 CUL5Q93034 780 aa20.81■□□□□ 0.92
SSR4P1-202ENST00000429427 CTAGE1Q96RT6 745 aa20.81■□□□□ 0.92
SSR4P1-202ENST00000429427 NOC4LQ9BVI4 516 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms