RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 OSBPL9Q96SU4 736 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 ACBD3Q9H3P7 528 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 GOLPH3Q9H4A6 298 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 PLAGL2Q9UPG8 496 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 TACC1O75410 805 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 UFL1O94874 794 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 FTCDO95954 541 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 GNA11P29992 359 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 CCDC181Q5TID7 509 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 KCTD16Q68DU8 428 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 EHBP1Q8NDI1 1231 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 NYXQ9GZU5 481 aa15.95■□□□□ 0.14
ERCC3-202ENST00000426778 SNED1Q8TER0 1413 aa15.94■□□□□ 0.14
ERCC3-202ENST00000426778 GOLGA6BA6NDN3 693 aa15.94■□□□□ 0.14
ERCC3-202ENST00000426778 MARCH6O60337 910 aa15.94■□□□□ 0.14
ERCC3-202ENST00000426778 CENPPQ6IPU0 288 aa15.94■□□□□ 0.14
ERCC3-202ENST00000426778 ZSCAN29Q8IWY8 852 aaPredicted RBP15.94■□□□□ 0.14
ERCC3-202ENST00000426778 TSEN2Q8NCE0 465 aaKnown RBP15.94■□□□□ 0.14
ERCC3-202ENST00000426778 NOC3LQ8WTT2 800 aaKnown RBP15.94■□□□□ 0.14
ERCC3-202ENST00000426778 MED4Q9NPJ6 270 aa15.94■□□□□ 0.14
ERCC3-202ENST00000426778 RBM12Q9NTZ6 932 aaKnown RBP15.94■□□□□ 0.14
ERCC3-202ENST00000426778 IRS2Q9Y4H2 1338 aa15.94■□□□□ 0.14
ERCC3-202ENST00000426778 COL22A1Q8NFW1 1626 aaPredicted RBP15.94■□□□□ 0.14
ERCC3-202ENST00000426778 TRAF5O00463 557 aa15.94■□□□□ 0.14
ERCC3-202ENST00000426778 USO1O60763 962 aaKnown RBP15.94■□□□□ 0.14
ERCC3-202ENST00000426778 GPSM2P81274 684 aa15.94■□□□□ 0.14
ERCC3-202ENST00000426778 AMPD3Q01432 767 aa15.94■□□□□ 0.14
ERCC3-202ENST00000426778 TRADDQ15628 312 aa15.94■□□□□ 0.14
ERCC3-202ENST00000426778 MAP9Q49MG5 647 aa15.94■□□□□ 0.14
ERCC3-202ENST00000426778 ANKS1AQ92625 1134 aa15.94■□□□□ 0.14
ERCC3-202ENST00000426778 AK8Q96MA6 479 aa15.94■□□□□ 0.14
ERCC3-202ENST00000426778 RASSF4Q9H2L5 321 aa15.94■□□□□ 0.14
ERCC3-202ENST00000426778 LAD1O00515 517 aa15.93■□□□□ 0.14
ERCC3-202ENST00000426778 MFSD14BQ5SR56 506 aa15.93■□□□□ 0.14
ERCC3-202ENST00000426778 PURBQ96QR8 312 aaKnown RBP15.93■□□□□ 0.14
ERCC3-202ENST00000426778 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.93■□□□□ 0.14
ERCC3-202ENST00000426778 MXD3Q9BW11 206 aa15.93■□□□□ 0.14
ERCC3-202ENST00000426778 SPZ1Q9BXG8 430 aa15.93■□□□□ 0.14
ERCC3-202ENST00000426778 SPATA31A5Q5VU36 1347 aa15.93■□□□□ 0.14
ERCC3-202ENST00000426778 SPATA31A7Q8IWB4 1347 aa15.93■□□□□ 0.14
ERCC3-202ENST00000426778 E9PMD0 336 aa15.93■□□□□ 0.14
ERCC3-202ENST00000426778 SH2D3CQ8N5H7 860 aa15.93■□□□□ 0.14
ERCC3-202ENST00000426778 TRIM58Q8NG06 486 aa15.93■□□□□ 0.14
ERCC3-202ENST00000426778 IFT81Q8WYA0 676 aa15.93■□□□□ 0.14
ERCC3-202ENST00000426778 PACSIN1Q9BY11 444 aa15.93■□□□□ 0.14
ERCC3-202ENST00000426778 JRKLQ9Y4A0 524 aa15.93■□□□□ 0.14
ERCC3-202ENST00000426778 GOLGA6CA6NDK9 693 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 MYL1P05976 194 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 GOLGA6DP0CG33 693 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 TAL1P17542 331 aaPredicted RBP15.92■□□□□ 0.14
ERCC3-202ENST00000426778 POLR2FP61218 127 aaKnown RBP15.92■□□□□ 0.14
ERCC3-202ENST00000426778 TUBB4BP68371 445 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 KCNMA1Q12791 1236 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 CCDC40Q4G0X9 1142 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 KCTD1Q719H9 257 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 RETREG2Q8NC44 543 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 GOLGA6AQ9NYA3 693 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 RIMBP2O15034 1052 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 PDHBP11177 359 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 AKR1B1P15121 316 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 SHROOM1Q2M3G4 852 aaPredicted RBP15.92■□□□□ 0.14
ERCC3-202ENST00000426778 GALNT17Q6IS24 598 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 DPP8Q6V1X1 898 aaPredicted RBP15.92■□□□□ 0.14
ERCC3-202ENST00000426778 UNC13DQ70J99 1090 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 BAP1Q92560 729 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 ARL8AQ96BM9 186 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 MTMR9Q96QG7 549 aa15.92■□□□□ 0.14
ERCC3-202ENST00000426778 CDCA7Q9BWT1 371 aaPredicted RBP15.92■□□□□ 0.14
ERCC3-202ENST00000426778 CCNL1Q9UK58 526 aaPredicted RBP15.92■□□□□ 0.14
ERCC3-202ENST00000426778 MAN2A1Q16706 1144 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 LRRC55Q6ZSA7 311 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 C16orf86Q6ZW13 317 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 TLR10Q9BXR5 811 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 BCAS3Q9H6U6 928 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 RTCBQ9Y3I0 505 aaKnown RBP15.91■□□□□ 0.14
ERCC3-202ENST00000426778 FAM196BA6NMK8 535 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 PPP1R11O60927 126 aaPredicted RBP15.91■□□□□ 0.14
ERCC3-202ENST00000426778 STAT3P40763 770 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 AARSP49588 968 aaKnown RBP eCLIP15.91■□□□□ 0.14
ERCC3-202ENST00000426778 GUCY2FP51841 1108 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 ZNF804AQ7Z570 1209 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 NEDD1Q8NHV4 660 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 CUEDC2Q9H467 287 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 CD209Q9NNX6 404 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 ANO9A1A5B4 782 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 TLR2O60603 784 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 FAM153BP0C7A2 387 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 ATP1A2P50993 1020 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 ADCY7P51828 1080 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 SNAP25P60880 206 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 FAM153CQ494X1 144 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 KRT79Q5XKE5 535 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 HAUS3Q68CZ6 603 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 AENQ8WTP8 325 aaKnown RBP15.91■□□□□ 0.14
ERCC3-202ENST00000426778 RAD54LQ92698 747 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 LSM14BQ9BX40 385 aaKnown RBP15.91■□□□□ 0.14
ERCC3-202ENST00000426778 FAM153AQ9UHL3 310 aa15.91■□□□□ 0.14
ERCC3-202ENST00000426778 TARSL2A2RTX5 802 aaKnown RBP15.9■□□□□ 0.14
ERCC3-202ENST00000426778 USP17L15C9J2P7 530 aa15.9■□□□□ 0.14
ERCC3-202ENST00000426778 USP17L13C9JLJ4 530 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms