RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 TRAPPC10P48553 1259 aa11.35□□□□□ -0.59
HDLBP-209ENST00000422933 ARHGAP4P98171 946 aa11.35□□□□□ -0.59
HDLBP-209ENST00000422933 PRPF38BQ5VTL8 546 aaKnown RBP11.35□□□□□ -0.59
HDLBP-209ENST00000422933 NEK8Q86SG6 692 aa11.35□□□□□ -0.59
HDLBP-209ENST00000422933 VSIG10LQ86VR7 867 aa11.35□□□□□ -0.59
HDLBP-209ENST00000422933 GIMAP8Q8ND71 665 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-209ENST00000422933 RASGRP4Q8TDF6 673 aa11.35□□□□□ -0.59
HDLBP-209ENST00000422933 TBCKQ8TEA7 893 aa11.35□□□□□ -0.59
HDLBP-209ENST00000422933 IPO9Q96P70 1041 aaKnown RBP11.35□□□□□ -0.59
HDLBP-209ENST00000422933 GJB4Q9NTQ9 266 aa11.35□□□□□ -0.59
HDLBP-209ENST00000422933 TMEM260Q9NX78 707 aa11.35□□□□□ -0.59
HDLBP-209ENST00000422933 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-209ENST00000422933 ZHX1Q9UKY1 873 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-209ENST00000422933 PTCH2Q9Y6C5 1203 aa11.35□□□□□ -0.59
HDLBP-209ENST00000422933 MSCO60682 206 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 CYP3A4P08684 503 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 TGFB3P10600 412 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 ELNP15502 786 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 U2AF2P26368 475 aaKnown RBP eCLIP11.34□□□□□ -0.592e-9■■■□□ 15.4
HDLBP-209ENST00000422933 SETQ01105 290 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-209ENST00000422933 NR5A1Q13285 461 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 ACVR2BQ13705 512 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 TTLL4Q14679 1199 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 INF2Q27J81 1249 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 LETM2Q2VYF4 491 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 RILPL1Q5EBL4 403 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 IQSEC1Q6DN90 963 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 MORC4Q8TE76 937 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 SCFD2Q8WU76 684 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 PGBD1Q96JS3 809 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 SPC25Q9HBM1 224 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 HMX1Q9NP08 348 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-209ENST00000422933 COL20A1Q9P218 1284 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 FAM184BQ9ULE4 1060 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 CEP131Q9UPN4 1083 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 MRVI1Q9Y6F6 885 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 MYH7BA7E2Y1 1941 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 MCM3APO60318 1980 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 RPTORQ8N122 1335 aa11.34□□□□□ -0.59
HDLBP-209ENST00000422933 KIAA1217Q5T5P2 1943 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 NKRFO15226 690 aaKnown RBP eCLIP11.33□□□□□ -0.6
HDLBP-209ENST00000422933 FIBPO43427 364 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 CCNT1O60563 726 aaKnown RBP11.33□□□□□ -0.6
HDLBP-209ENST00000422933 ZSCAN22P10073 491 aaPredicted RBP11.33□□□□□ -0.6
HDLBP-209ENST00000422933 CYP2C19P33261 490 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 ORC2Q13416 577 aaPredicted RBP11.33□□□□□ -0.6
HDLBP-209ENST00000422933 CCL14Q16627 93 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 CEP55Q53EZ4 464 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 BRDTQ58F21 947 aaPredicted RBP11.33□□□□□ -0.6
HDLBP-209ENST00000422933 MOXD1Q6UVY6 613 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 SEPT14Q6ZU15 432 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 EEPD1Q7L9B9 569 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 NIPA1Q7RTP0 329 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 OXER1Q8TDS5 423 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 TRIB2Q92519 343 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 GPRASP2Q96D09 838 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 ZNF396Q96N95 335 aaPredicted RBP11.33□□□□□ -0.6
HDLBP-209ENST00000422933 PURBQ96QR8 312 aaKnown RBP11.33□□□□□ -0.6
HDLBP-209ENST00000422933 MXRA8Q9BRK3 442 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 RTEL1Q9NZ71 1219 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 CIZ1Q9ULV3 898 aaPredicted RBP11.33□□□□□ -0.6
HDLBP-209ENST00000422933 FRMPD4Q14CM0 1322 aa11.33□□□□□ -0.6
HDLBP-209ENST00000422933 M0R2N6 131 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 BMP15O95972 392 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 INHAP05111 366 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 PRKAR2AP13861 404 aaKnown RBP11.32□□□□□ -0.6
HDLBP-209ENST00000422933 AKR1A1P14550 325 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 CAPN2P17655 700 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 ATP2B1P20020 1258 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 EDNRBP24530 442 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 TNFAIP2Q03169 654 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 MTMR1Q13613 665 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 NEDD9Q14511 834 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 NPY5RQ15761 445 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 PPP4R3AQ6IN85 833 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 PLA2G4DQ86XP0 818 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 SDF4Q9BRK5 362 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 TMEM106CQ9BVX2 250 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 AP5M1Q9H0R1 490 aa11.32□□□□□ -0.6
HDLBP-209ENST00000422933 DDX25Q9UHL0 483 aaKnown RBP11.32□□□□□ -0.6
HDLBP-209ENST00000422933 LCTP09848 1927 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 POTEFA5A3E0 1075 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 SEPT4O43236 478 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 SNAI1O95863 264 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-209ENST00000422933 TXNP10599 105 aaKnown RBP11.31□□□□□ -0.6
HDLBP-209ENST00000422933 RARBP10826 455 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 CIITAP33076 1130 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 CACNB2Q08289 660 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-209ENST00000422933 PRR16Q569H4 304 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 TTC38Q5R3I4 469 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 ATL3Q6DD88 541 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 FERMT3Q86UX7 667 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 FBXO16Q8IX29 292 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-209ENST00000422933 SLFN12Q8IYM2 578 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 SH3TC2Q8TF17 1288 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 WDR11Q9BZH6 1224 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 MLXIPQ9HAP2 919 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 JADE2Q9NQC1 790 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 FLRT1Q9NZU1 646 aa11.31□□□□□ -0.6
HDLBP-209ENST00000422933 CFAP45Q9UL16 551 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms