RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 FZD9O00144 591 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 PYGMP11217 842 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 GUCY2CP25092 1073 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 ATICP31939 592 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 IARSP41252 1262 aaKnown RBP6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 TSPAN7P41732 249 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 PDE4BQ07343 736 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 ADGRE1Q14246 886 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 SEPT2Q15019 361 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 TMEM240Q5SV17 173 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 ZBTB37Q5TC79 503 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 CDC37L1Q7L3B6 337 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 UBE3DQ7Z6J8 389 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 SLC41A1Q8IVJ1 513 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 NKAIN3Q8N8D7 197 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 SPATA5Q8NB90 893 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 CCT6BQ92526 530 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 ISL2Q96A47 359 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 MEGF10Q96KG7 1140 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 AIFM3Q96NN9 605 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 IPO9Q96P70 1041 aaKnown RBP6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 DPH2Q9BQC3 489 aaPredicted RBP6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 WNT10AQ9GZT5 417 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 TRIM39Q9HCM9 518 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 ARHGEF4Q9NR80 690 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 DAGLAQ9Y4D2 1042 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 AFG3L2Q9Y4W6 797 aa6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 TNPO3Q9Y5L0 923 aaKnown RBP6.57□□□□□ -1.36
PTP4A1P1-201ENST00000420539 A0A1B0GVC2 190 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 FAM86C2PA6NEL3 165 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 ZEB2O60315 1214 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 TLR5O60602 858 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 MT-CO1P00395 513 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 LTFP02788 710 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 CAPN3P20807 821 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 ADD2P35612 726 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 RECQLP46063 649 aaPredicted RBP6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 USP14P54578 494 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 APBA1Q02410 837 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 KCNMA1Q12791 1236 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 ZNF460Q14592 562 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 SGO2Q562F6 1265 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 DUSP27Q5VZP5 1158 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 TXNRD3Q86VQ6 643 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 SMYD4Q8IYR2 804 aaPredicted RBP6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 NDUFAF2Q8N183 169 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 RNF214Q8ND24 703 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 FRS2Q8WU20 508 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 FBLIM1Q8WUP2 373 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 UTP4Q969X6 686 aaKnown RBP6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 DCAF5Q96JK2 942 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 CDHR1Q96JP9 859 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 TM9SF2Q99805 663 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 CRB3Q9BUF7 120 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 APOBEC2Q9Y235 224 aaKnown RBP6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 PTPN22Q9Y2R2 807 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 GPR52Q9Y2T5 361 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 SLC4A7Q9Y6M7 1214 aa6.56□□□□□ -1.36
PTP4A1P1-201ENST00000420539 SYNGAP1Q96PV0 1343 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 TRAV20A0A0B4J274 112 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 A0A1W2PQU0 124 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 C1QTNF9BB2RNN3 333 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 FANCGO15287 622 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 DNAJA2O60884 412 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 BMP3P12645 472 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 HSD3B1P14060 373 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 RHCEP18577 417 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 NTF4P34130 210 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 CHKAP35790 457 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 GRK6P43250 576 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 RHDQ02161 417 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 RING1Q06587 406 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 MLECQ14165 292 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 PCBP2Q15366 365 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 PDCD2Q16342 344 aaPredicted RBP6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 INAVAQ3KP66 663 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 CDPF1Q6NVV7 123 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 CHST15Q7LFX5 561 aaPredicted RBP6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 ALYREFQ86V81 257 aaKnown RBP6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 CD163Q86VB7 1156 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 SCUBE1Q8IWY4 988 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 FAM43AQ8N2R8 423 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 XAGE3Q8WTP9 111 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 RPGRQ92834 1020 aaKnown RBP6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 ACSF2Q96CM8 615 aaPredicted RBP6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 GCC1Q96CN9 775 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 SGCZQ96LD1 299 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 KCNF1Q9H3M0 494 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 RSAD1Q9HA92 442 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 ALG13Q9NP73 1137 aaKnown RBP6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 SMYD2Q9NRG4 433 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 C1orf112Q9NSG2 853 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 SMC4Q9NTJ3 1288 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 BLOC1S4Q9NUP1 217 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 RRN3Q9NYV6 651 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 FEZ2Q9UHY8 353 aaPredicted RBP6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 FBXO10Q9UK96 956 aa6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 LRRFIP2Q9Y608 721 aaKnown RBP6.55□□□□□ -1.36
PTP4A1P1-201ENST00000420539 hCG_1642624A0A1W2PR95 340 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms