RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 ZBTB43O43298 467 aa17.67■□□□□ 0.42
NUP50-204ENST00000417702 CCND2P30279 289 aa17.67■□□□□ 0.42
NUP50-204ENST00000417702 FPGSQ05932 587 aa17.67■□□□□ 0.42
NUP50-204ENST00000417702 RTN1Q16799 776 aa17.67■□□□□ 0.42
NUP50-204ENST00000417702 KCNV1Q6PIU1 500 aa17.67■□□□□ 0.42
NUP50-204ENST00000417702 CCDC82Q8N4S0 544 aa17.67■□□□□ 0.42
NUP50-204ENST00000417702 SMARCC2Q8TAQ2 1214 aa17.67■□□□□ 0.42
NUP50-204ENST00000417702 JAKMIP1Q96N16 626 aaKnown RBP17.67■□□□□ 0.42
NUP50-204ENST00000417702 DDX41Q9UJV9 622 aaKnown RBP17.67■□□□□ 0.42
NUP50-204ENST00000417702 LTBP2Q14767 1821 aa17.67■□□□□ 0.42
NUP50-204ENST00000417702 GRIN2DO15399 1336 aa17.67■□□□□ 0.42
NUP50-204ENST00000417702 CD4P01730 458 aa17.66■□□□□ 0.42
NUP50-204ENST00000417702 SHHQ15465 462 aa17.66■□□□□ 0.42
NUP50-204ENST00000417702 BLOC1S2Q6QNY1 142 aa17.66■□□□□ 0.42
NUP50-204ENST00000417702 AFG1LQ8WV93 481 aa17.66■□□□□ 0.42
NUP50-204ENST00000417702 BRPF3Q9ULD4 1205 aa17.66■□□□□ 0.42
NUP50-204ENST00000417702 NAP1L2Q9ULW6 460 aaPredicted RBP17.66■□□□□ 0.42
NUP50-204ENST00000417702 SNX14Q9Y5W7 946 aa17.66■□□□□ 0.42
NUP50-204ENST00000417702 KLF18A0A0U1RQI7 1052 aa17.65■□□□□ 0.42
NUP50-204ENST00000417702 EPB41L2O43491 1005 aaKnown RBP17.65■□□□□ 0.42
NUP50-204ENST00000417702 PSMA5P28066 241 aa17.65■□□□□ 0.42
NUP50-204ENST00000417702 ARHGAP1Q07960 439 aa17.65■□□□□ 0.42
NUP50-204ENST00000417702 LAMC2Q13753 1193 aa17.65■□□□□ 0.42
NUP50-204ENST00000417702 MFSD5Q6N075 450 aa17.65■□□□□ 0.42
NUP50-204ENST00000417702 GPR153Q6NV75 609 aa17.65■□□□□ 0.42
NUP50-204ENST00000417702 DHX37Q8IY37 1157 aaKnown RBP17.65■□□□□ 0.42
NUP50-204ENST00000417702 TMEM199Q8N511 208 aa17.65■□□□□ 0.42
NUP50-204ENST00000417702 IL31RAQ8NI17 732 aa17.65■□□□□ 0.42
NUP50-204ENST00000417702 PPP1R12CQ9BZL4 782 aa17.65■□□□□ 0.42
NUP50-204ENST00000417702 PSTPIP2Q9H939 334 aa17.65■□□□□ 0.42
NUP50-204ENST00000417702 hCG_1642624A0A1W2PR95 340 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 GOLGA8AA7E2F4 631 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 GOLGA8BA8MQT2 603 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 PIK3CDO00329 1044 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 STAM2O75886 525 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 MMP3P08254 477 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 SUPT20HL2P0C7V6 817 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 TGFB3P10600 412 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 CASTP20810 708 aaKnown RBP17.64■□□□□ 0.41
NUP50-204ENST00000417702 RCAN1P53805 252 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 PPIGQ13427 754 aaKnown RBP eCLIP17.64■□□□□ 0.41
NUP50-204ENST00000417702 NBPF20Q3BBV1 942 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 GNPTABQ3T906 1256 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 FAM47CQ5HY64 1035 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 C9orf50Q5SZB4 431 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 USP17L6PQ6QN14 398 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 HEATR3Q7Z4Q2 680 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 EMID1Q96A84 441 aaPredicted RBP17.64■□□□□ 0.41
NUP50-204ENST00000417702 TRPV6Q9H1D0 765 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 ALDH8A1Q9H2A2 487 aaPredicted RBP17.64■□□□□ 0.41
NUP50-204ENST00000417702 HIPK3Q9H422 1215 aa17.64■□□□□ 0.41
NUP50-204ENST00000417702 KIAA1217Q5T5P2 1943 aa17.63■□□□□ 0.41
NUP50-204ENST00000417702 B4GALT4O60513 344 aa17.63■□□□□ 0.41
NUP50-204ENST00000417702 RGS20O76081 388 aa17.63■□□□□ 0.41
NUP50-204ENST00000417702 CPA1P15085 419 aa17.63■□□□□ 0.41
NUP50-204ENST00000417702 CHMP4BP1P59074 171 aa17.63■□□□□ 0.41
NUP50-204ENST00000417702 DGKDQ16760 1214 aa17.63■□□□□ 0.41
NUP50-204ENST00000417702 NFRKBQ6P4R8 1299 aa17.63■□□□□ 0.41
NUP50-204ENST00000417702 Q6ZUG5 572 aa17.63■□□□□ 0.41
NUP50-204ENST00000417702 FRMPD4Q14CM0 1322 aa17.63■□□□□ 0.41
NUP50-204ENST00000417702 CCDC196A0A1B0GTZ2 297 aa17.62■□□□□ 0.41
NUP50-204ENST00000417702 MEIS2O14770 477 aa17.62■□□□□ 0.41
NUP50-204ENST00000417702 CYP2C18P33260 490 aa17.62■□□□□ 0.41
NUP50-204ENST00000417702 EPHB4P54760 987 aa17.62■□□□□ 0.41
NUP50-204ENST00000417702 PTPN11Q06124 597 aaPredicted RBP17.62■□□□□ 0.41
NUP50-204ENST00000417702 CELF3Q5SZQ8 465 aaKnown RBP17.62■□□□□ 0.41
NUP50-204ENST00000417702 XRRA1Q6P2D8 792 aa17.62■□□□□ 0.41
NUP50-204ENST00000417702 PPTC7Q8NI37 304 aa17.62■□□□□ 0.41
NUP50-204ENST00000417702 BRF1Q92994 677 aa17.62■□□□□ 0.41
NUP50-204ENST00000417702 ZFP91Q96JP5 570 aaPredicted RBP17.62■□□□□ 0.41
NUP50-204ENST00000417702 RNPC3Q96LT9 517 aaKnown RBP17.62■□□□□ 0.41
NUP50-204ENST00000417702 TRMT13Q9NUP7 481 aaKnown RBP17.62■□□□□ 0.41
NUP50-204ENST00000417702 CNTNAP5Q8WYK1 1306 aa17.62■□□□□ 0.41
NUP50-204ENST00000417702 SCN10AQ9Y5Y9 1956 aa17.62■□□□□ 0.41
NUP50-204ENST00000417702 GGPS1O95749 300 aa17.61■□□□□ 0.41
NUP50-204ENST00000417702 UBA1P22314 1058 aaKnown RBP17.61■□□□□ 0.41
NUP50-204ENST00000417702 RPS6KB1P23443 525 aa17.61■□□□□ 0.41
NUP50-204ENST00000417702 METAP2P50579 478 aaKnown RBP eCLIP17.61■□□□□ 0.41
NUP50-204ENST00000417702 APOBRQ0VD83 1088 aa17.61■□□□□ 0.41
NUP50-204ENST00000417702 GPKOWQ92917 476 aaPredicted RBP eCLIP17.61■□□□□ 0.41
NUP50-204ENST00000417702 SPATA33Q96N06 139 aa17.61■□□□□ 0.41
NUP50-204ENST00000417702 NOC4LQ9BVI4 516 aaKnown RBP17.61■□□□□ 0.41
NUP50-204ENST00000417702 MLXIPQ9HAP2 919 aa17.61■□□□□ 0.41
NUP50-204ENST00000417702 NOD1Q9Y239 953 aa17.61■□□□□ 0.41
NUP50-204ENST00000417702 V9GY48 417 aaPredicted RBP17.61■□□□□ 0.41
NUP50-204ENST00000417702 LAMA3Q16787 3333 aa17.61■□□□□ 0.41
NUP50-204ENST00000417702 SPDYE3A6NKU9 549 aa17.6■□□□□ 0.41
NUP50-204ENST00000417702 CSF2RAP15509 400 aa17.6■□□□□ 0.41
NUP50-204ENST00000417702 NAPAP54920 295 aa17.6■□□□□ 0.41
NUP50-204ENST00000417702 MRPS9P82933 396 aaKnown RBP17.6■□□□□ 0.41
NUP50-204ENST00000417702 MYSM1Q5VVJ2 828 aa17.6■□□□□ 0.41
NUP50-204ENST00000417702 PCNX4Q63HM2 1172 aa17.6■□□□□ 0.41
NUP50-204ENST00000417702 FBXL16Q8N461 479 aa17.6■□□□□ 0.41
NUP50-204ENST00000417702 INPP4AQ96PE3 977 aaPredicted RBP17.6■□□□□ 0.41
NUP50-204ENST00000417702 KATNAL1Q9BW62 490 aa17.6■□□□□ 0.41
NUP50-204ENST00000417702 RTEL1Q9NZ71 1219 aa17.6■□□□□ 0.41
NUP50-204ENST00000417702 hCG_1984214I3L0E3 225 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 FIBPO43427 364 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 SORBS3O60504 671 aa17.59■□□□□ 0.41
NUP50-204ENST00000417702 PPFIA4O75335 1185 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms