RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 AMPD3Q01432 767 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 PLCL1Q15111 1095 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 YOD1Q5VVQ6 348 aaPredicted RBP6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 ZPBP2Q6X784 338 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 KSR1Q8IVT5 923 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 NAT16Q8N8M0 369 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 AGBL5Q8NDL9 886 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 ZSWIM2Q8NEG5 633 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 RNPC3Q96LT9 517 aaKnown RBP6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 ALPK1Q96QP1 1244 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 CEP89Q96ST8 783 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 CDC6Q99741 560 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 IER2Q9BTL4 223 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 CXorf56Q9H5V9 222 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 PRDM7Q9NQW5 492 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 PTCH2Q9Y6C5 1203 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 DNAJC6O75061 913 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 HOXC12P31275 282 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 GNALP38405 381 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 SEPHS1P49903 392 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 LONRF2Q1L5Z9 754 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 CCDC92Q53HC0 331 aaPredicted RBP6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 EEF1DP3Q658K8 133 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 SLC23A3Q6PIS1 610 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 JMYQ8N9B5 988 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 VPS37AQ8NEZ2 397 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 PPM1EQ8WY54 764 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 RELTQ969Z4 430 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 IPO9Q96P70 1041 aaKnown RBP6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 MPHOSPH6Q99547 160 aaKnown RBP6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 CYP26B1Q9NR63 512 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 TYW1Q9NV66 732 aaKnown RBP6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 ODF2LQ9ULJ1 636 aa6.45□□□□□ -1.38
TTC39DP-201ENST00000416781 C2orf71A6NGG8 1288 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 PRODHO43272 600 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 HMMRO75330 724 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 FGFR1P11362 822 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 PDE6BP35913 854 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 ECI1P42126 302 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 RGS3P49796 1198 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 GFRA1P56159 465 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 SATB1Q01826 763 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 SIM2Q14190 667 aaPredicted RBP6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 SF1Q15637 639 aaKnown RBP6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 LONRF1Q17RB8 773 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 ALDH1L2Q3SY69 923 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 RCSD1Q6JBY9 416 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 ANKRD13BQ86YJ7 626 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 PI4K2BQ8TCG2 481 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 FCRL2Q96LA5 508 aaPredicted RBP6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 CCDC140Q96MF4 163 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 SLC26A8Q96RN1 970 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 ARPC5LQ9BPX5 153 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 ALDH8A1Q9H2A2 487 aaPredicted RBP6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 KANSL2Q9H9L4 492 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 TMEM59LQ9UK28 342 aa6.44□□□□□ -1.38
TTC39DP-201ENST00000416781 DNAJC25-GNG10A0A024R161 153 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 IPO8O15397 1037 aaKnown RBP6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 FGF10O15520 208 aaPredicted RBP6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 MTA2O94776 668 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 FOSP01100 380 aaPredicted RBP6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 CAPNS1P04632 268 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 PABPC1P11940 636 aaKnown RBP6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 ATICP31939 592 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 CLK1P49759 484 aaKnown RBP6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 DUSP4Q13115 394 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 TMEM67Q5HYA8 995 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 ZC3H12BQ5HYM0 836 aaKnown RBP6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 RALGPS1Q5JS13 557 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 ODR4Q5SWX8 454 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 ARTNQ5T4W7 220 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 NSMFQ6X4W1 530 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 SAMD3Q8N6K7 520 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 KCTD13Q8WZ19 329 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 COPS5Q92905 334 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 ITFG2Q969R8 447 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 RANBP17Q9H2T7 1088 aaKnown RBP6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 ERVK13-1Q9NX77 482 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 ACAD8Q9UKU7 415 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 LZTS1Q9Y250 596 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 THRAP3Q9Y2W1 955 aaKnown RBP6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 SLC45A1Q9Y2W3 748 aa6.43□□□□□ -1.38
TTC39DP-201ENST00000416781 TRBV23-1A0A0A0MS06 115 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 CPP00450 1065 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 SCG5P05408 212 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 THBDP07204 575 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 CD151P48509 253 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 MAP4K2Q12851 820 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 SQSTM1Q13501 440 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 PRSS53Q2L4Q9 553 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 FOXB2Q5VYV0 432 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 CYP2R1Q6VVX0 501 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 HSCBQ8IWL3 235 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 CHPFQ8IZ52 775 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 TMEM145Q8NBT3 493 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 EXOC2Q96KP1 924 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 ADAMTS10Q9H324 1103 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 ZFP64Q9NPA5 681 aa6.42□□□□□ -1.38
TTC39DP-201ENST00000416781 ISY1Q9ULR0 285 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms