RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 YIPF4Q9BSR8 244 aa9.25□□□□□ -0.93
SMC4P1-201ENST00000414479 LRRC4CQ9HCJ2 640 aa9.25□□□□□ -0.93
SMC4P1-201ENST00000414479 EMC7Q9NPA0 242 aa9.25□□□□□ -0.93
SMC4P1-201ENST00000414479 CRTAC1Q9NQ79 661 aa9.25□□□□□ -0.93
SMC4P1-201ENST00000414479 CLDND1Q9NY35 253 aa9.25□□□□□ -0.93
SMC4P1-201ENST00000414479 ZIM2Q9NZV7 527 aa9.25□□□□□ -0.93
SMC4P1-201ENST00000414479 WASHC2AQ641Q2 1341 aa9.25□□□□□ -0.93
SMC4P1-201ENST00000414479 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 SHTN1A0MZ66 631 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 GOLGA6CA6NDK9 693 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 GOLGA6BA6NDN3 693 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 H7BY64 318 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 H7C1D1 291 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 TRAF5O00463 557 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 SCGB1D2O95969 90 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 GOLGA6DP0CG33 693 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 RPL10P27635 214 aaKnown RBP9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 ID4P47928 161 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 RAB27AP51159 221 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 EGR3Q06889 387 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 SPIRE1Q08AE8 756 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 HLTFQ14527 1009 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 ZNF174Q15697 407 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 HDGFL2Q7Z4V5 671 aaPredicted RBP9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 WAPLQ7Z5K2 1190 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 CPNE8Q86YQ8 564 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 FAM181AQ8N9Y4 354 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 COG1Q8WTW3 980 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 BOCQ9BWV1 1114 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 GOLGA6AQ9NYA3 693 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 ADGRE2Q9UHX3 823 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 PCDHA11Q9Y5I1 949 aa9.24□□□□□ -0.93
SMC4P1-201ENST00000414479 K7ESF4 209 aa9.23□□□□□ -0.93
SMC4P1-201ENST00000414479 AKAP10O43572 662 aa9.23□□□□□ -0.93
SMC4P1-201ENST00000414479 MECP2P51608 486 aaKnown RBP9.23□□□□□ -0.93
SMC4P1-201ENST00000414479 INF2Q27J81 1249 aa9.23□□□□□ -0.93
SMC4P1-201ENST00000414479 OVCH1Q7RTY7 1134 aa9.23□□□□□ -0.93
SMC4P1-201ENST00000414479 CD163Q86VB7 1156 aa9.23□□□□□ -0.93
SMC4P1-201ENST00000414479 MYO1HQ8N1T3 1032 aa9.23□□□□□ -0.93
SMC4P1-201ENST00000414479 CISD2Q8N5K1 135 aaKnown RBP9.23□□□□□ -0.93
SMC4P1-201ENST00000414479 EFHBQ8N7U6 833 aa9.23□□□□□ -0.93
SMC4P1-201ENST00000414479 CHTF18Q8WVB6 975 aa9.23□□□□□ -0.93
SMC4P1-201ENST00000414479 ASB11Q8WXH4 323 aa9.23□□□□□ -0.93
SMC4P1-201ENST00000414479 TMEM169Q96HH4 297 aa9.23□□□□□ -0.93
SMC4P1-201ENST00000414479 COA3Q9Y2R0 106 aaPredicted RBP9.23□□□□□ -0.93
SMC4P1-201ENST00000414479 C7orf72A4D263 438 aa9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 C1QTNF9BB2RNN3 333 aa9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 CYP26A1O43174 497 aa9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 PLIN1O60240 522 aa9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 HIP1RO75146 1068 aa9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 CT47B1P0C2W7 299 aaPredicted RBP9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 GNAT1P11488 350 aa9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 LORP23490 312 aaPredicted RBP9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 CCND1P24385 295 aa9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 DDB1Q16531 1140 aa9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 RAVER1Q8IY67 606 aaKnown RBP9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 TSR2Q969E8 191 aaKnown RBP9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 HOOK2Q96ED9 719 aa9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 AHCYL2Q96HN2 611 aaKnown RBP9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 CCDC8Q9H0W5 538 aaPredicted RBP9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 CDH19Q9H159 772 aa9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 GABBR1Q9UBS5 961 aa9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 NUB1Q9Y5A7 615 aa9.22□□□□□ -0.93
SMC4P1-201ENST00000414479 SLC12A8A0AV02 714 aa9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 ARNTLO00327 626 aa9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 GABRDO14764 452 aa9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 PRKD3O94806 890 aa9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 IGLV1-40P01703 118 aa9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 ATP2A2P16615 1042 aaKnown RBP9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 ATF3P18847 181 aa9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 BCL6P41182 706 aa9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 LACTBP83111 547 aaPredicted RBP9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 SHKBP1Q8TBC3 707 aa9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 SLC5A5Q92911 643 aa9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 TRMT2BQ96GJ1 504 aaKnown RBP9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 EPB41L1Q9H4G0 881 aa9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 PCIF1Q9H4Z3 704 aa9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 LUC7LQ9NQ29 371 aaKnown RBP9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 SEMA3GQ9NS98 782 aa9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 ERVK13-1Q9NX77 482 aa9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 PITPNM2Q9BZ72 1349 aa9.21□□□□□ -0.94
SMC4P1-201ENST00000414479 CAND2O75155 1236 aa9.2□□□□□ -0.94
SMC4P1-201ENST00000414479 CFBP00751 764 aa9.2□□□□□ -0.94
SMC4P1-201ENST00000414479 TEKQ02763 1124 aa9.2□□□□□ -0.94
SMC4P1-201ENST00000414479 DUSP4Q13115 394 aa9.2□□□□□ -0.94
SMC4P1-201ENST00000414479 GPR19Q15760 415 aa9.2□□□□□ -0.94
SMC4P1-201ENST00000414479 OTOP1Q7RTM1 612 aa9.2□□□□□ -0.94
SMC4P1-201ENST00000414479 SLC51AQ86UW1 340 aa9.2□□□□□ -0.94
SMC4P1-201ENST00000414479 HRASLS5Q96KN8 279 aa9.2□□□□□ -0.94
SMC4P1-201ENST00000414479 KCNJ15Q99712 375 aa9.2□□□□□ -0.94
SMC4P1-201ENST00000414479 SPTLC3Q9NUV7 552 aa9.2□□□□□ -0.94
SMC4P1-201ENST00000414479 BTG4Q9NY30 223 aa9.2□□□□□ -0.94
SMC4P1-201ENST00000414479 TNFRSF10DQ9UBN6 386 aa9.2□□□□□ -0.94
SMC4P1-201ENST00000414479 ZNF180Q9UJW8 692 aa9.2□□□□□ -0.94
SMC4P1-201ENST00000414479 ZNF652Q9Y2D9 606 aa9.2□□□□□ -0.94
SMC4P1-201ENST00000414479 TMEM82A0PJX8 343 aa9.19□□□□□ -0.94
SMC4P1-201ENST00000414479 DGKIO75912 1065 aa9.19□□□□□ -0.94
SMC4P1-201ENST00000414479 SNUPNO95149 360 aaKnown RBP9.19□□□□□ -0.94
SMC4P1-201ENST00000414479 PTPN21Q16825 1174 aa9.19□□□□□ -0.94
SMC4P1-201ENST00000414479 MBLAC2Q68D91 279 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms