RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 ALDH8A1Q9H2A2 487 aaPredicted RBP22.67■■□□□ 1.22
TSPAN4-209ENST00000409543 PPIGQ13427 754 aaKnown RBP eCLIP22.66■■□□□ 1.223e-9■■■□□ 16.8
TSPAN4-209ENST00000409543 AFG1LQ8WV93 481 aa22.66■■□□□ 1.22
TSPAN4-209ENST00000409543 EMID1Q96A84 441 aaPredicted RBP22.66■■□□□ 1.22
TSPAN4-209ENST00000409543 HIPK3Q9H422 1215 aa22.66■■□□□ 1.22
TSPAN4-209ENST00000409543 MRVI1Q9Y6F6 885 aa22.66■■□□□ 1.22
TSPAN4-209ENST00000409543 SCN10AQ9Y5Y9 1956 aa22.65■■□□□ 1.22
TSPAN4-209ENST00000409543 RGS20O76081 388 aa22.65■■□□□ 1.22
TSPAN4-209ENST00000409543 SUPT20HL2P0C7V6 817 aa22.65■■□□□ 1.22
TSPAN4-209ENST00000409543 CCND2P30279 289 aa22.65■■□□□ 1.22
TSPAN4-209ENST00000409543 NBPF20Q3BBV1 942 aa22.65■■□□□ 1.22
TSPAN4-209ENST00000409543 ADCK5Q3MIX3 580 aa22.65■■□□□ 1.22
TSPAN4-209ENST00000409543 FAM109BQ6ICB4 259 aaPredicted RBP22.65■■□□□ 1.22
TSPAN4-209ENST00000409543 NFRKBQ6P4R8 1299 aa22.65■■□□□ 1.22
TSPAN4-209ENST00000409543 KCNV1Q6PIU1 500 aa22.65■■□□□ 1.22
TSPAN4-209ENST00000409543 SYNE3Q6ZMZ3 975 aa22.65■■□□□ 1.22
TSPAN4-209ENST00000409543 CMTR1Q8N1G2 835 aaKnown RBP22.65■■□□□ 1.22
TSPAN4-209ENST00000409543 IL31RAQ8NI17 732 aa22.65■■□□□ 1.22
TSPAN4-209ENST00000409543 RNPC3Q96LT9 517 aaKnown RBP22.65■■□□□ 1.22
TSPAN4-209ENST00000409543 LAMA2P24043 3122 aaKnown RBP22.65■■□□□ 1.22
TSPAN4-209ENST00000409543 MMP3P08254 477 aa22.64■■□□□ 1.21
TSPAN4-209ENST00000409543 CSF2RAP15509 400 aa22.64■■□□□ 1.21
TSPAN4-209ENST00000409543 CYP2C18P33260 490 aa22.64■■□□□ 1.21
TSPAN4-209ENST00000409543 PTPN11Q06124 597 aaPredicted RBP22.64■■□□□ 1.21
TSPAN4-209ENST00000409543 LAMC2Q13753 1193 aa22.64■■□□□ 1.21
TSPAN4-209ENST00000409543 TMTC3Q6ZXV5 915 aa22.64■■□□□ 1.21
TSPAN4-209ENST00000409543 Q7L0L9 218 aa22.64■■□□□ 1.21
TSPAN4-209ENST00000409543 RAB11FIP4Q86YS3 637 aa22.64■■□□□ 1.21
TSPAN4-209ENST00000409543 KCNB2Q92953 911 aa22.64■■□□□ 1.21
TSPAN4-209ENST00000409543 NOC4LQ9BVI4 516 aaKnown RBP22.64■■□□□ 1.21
TSPAN4-209ENST00000409543 FRMPD4Q14CM0 1322 aa22.63■■□□□ 1.21
TSPAN4-209ENST00000409543 HMGB1P09429 215 aaKnown RBP22.63■■□□□ 1.21
TSPAN4-209ENST00000409543 TGFB3P10600 412 aa22.63■■□□□ 1.21
TSPAN4-209ENST00000409543 CASTP20810 708 aaKnown RBP22.63■■□□□ 1.21
TSPAN4-209ENST00000409543 SMAD3P84022 425 aaKnown RBP22.63■■□□□ 1.21
TSPAN4-209ENST00000409543 APOA5Q6Q788 366 aa22.63■■□□□ 1.21
TSPAN4-209ENST00000409543 C16orf59Q7L2K0 433 aa22.63■■□□□ 1.21
TSPAN4-209ENST00000409543 MICU3Q86XE3 530 aa22.63■■□□□ 1.21
TSPAN4-209ENST00000409543 TRMT13Q9NUP7 481 aaKnown RBP22.63■■□□□ 1.21
TSPAN4-209ENST00000409543 PIK3CDO00329 1044 aa22.62■■□□□ 1.21
TSPAN4-209ENST00000409543 FAM47CQ5HY64 1035 aa22.62■■□□□ 1.21
TSPAN4-209ENST00000409543 DHX37Q8IY37 1157 aaKnown RBP22.62■■□□□ 1.21
TSPAN4-209ENST00000409543 SMARCC2Q8TAQ2 1214 aa22.62■■□□□ 1.21
TSPAN4-209ENST00000409543 CUL5Q93034 780 aa22.62■■□□□ 1.21
TSPAN4-209ENST00000409543 TCEANC2Q96MN5 208 aa22.62■■□□□ 1.21
TSPAN4-209ENST00000409543 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.62■■□□□ 1.212e-12■□□□□ 9.2
TSPAN4-209ENST00000409543 MTMR10Q9NXD2 777 aa22.62■■□□□ 1.21
TSPAN4-209ENST00000409543 UMODL1Q5DID0 1318 aa22.61■■□□□ 1.21
TSPAN4-209ENST00000409543 MEIS2O14770 477 aa22.61■■□□□ 1.21
TSPAN4-209ENST00000409543 STAM2O75886 525 aa22.61■■□□□ 1.21
TSPAN4-209ENST00000409543 HSPA4P34932 840 aa22.61■■□□□ 1.21
TSPAN4-209ENST00000409543 DGKDQ16760 1214 aa22.61■■□□□ 1.21
TSPAN4-209ENST00000409543 TMEM240Q5SV17 173 aa22.61■■□□□ 1.21
TSPAN4-209ENST00000409543 USP17L6PQ6QN14 398 aa22.61■■□□□ 1.21
TSPAN4-209ENST00000409543 CCDC82Q8N4S0 544 aa22.61■■□□□ 1.21
TSPAN4-209ENST00000409543 PPTC7Q8NI37 304 aa22.61■■□□□ 1.21
TSPAN4-209ENST00000409543 IL23AQ9NPF7 189 aa22.61■■□□□ 1.21
TSPAN4-209ENST00000409543 RBM28Q9NW13 759 aaKnown RBP22.61■■□□□ 1.21
TSPAN4-209ENST00000409543 BRPF3Q9ULD4 1205 aa22.61■■□□□ 1.21
TSPAN4-209ENST00000409543 ZBTB43O43298 467 aa22.6■■□□□ 1.21
TSPAN4-209ENST00000409543 CELF3Q5SZQ8 465 aaKnown RBP22.6■■□□□ 1.21
TSPAN4-209ENST00000409543 MYSM1Q5VVJ2 828 aa22.6■■□□□ 1.21
TSPAN4-209ENST00000409543 PSRC1Q6PGN9 363 aaPredicted RBP22.6■■□□□ 1.21
TSPAN4-209ENST00000409543 PSTPIP2Q9H939 334 aa22.6■■□□□ 1.21
TSPAN4-209ENST00000409543 hCG_1642624A0A1W2PR95 340 aa22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 REC8O95072 547 aa22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 CYP2C9P11712 490 aa22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 CCL23P55773 120 aa22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 MRPS9P82933 396 aaKnown RBP22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 SP2Q02086 613 aa22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 GNPTABQ3T906 1256 aa22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 XRRA1Q6P2D8 792 aa22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 ZNF365Q70YC5 407 aa22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 SESTD1Q86VW0 696 aa22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 KAT2BQ92831 832 aa22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 ZFP91Q96JP5 570 aaPredicted RBP22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 INPP4AQ96PE3 977 aaPredicted RBP22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 WNT8AQ9H1J5 351 aa22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 MYH7BA7E2Y1 1941 aa22.59■■□□□ 1.21
TSPAN4-209ENST00000409543 GGPS1O95749 300 aa22.58■■□□□ 1.21
TSPAN4-209ENST00000409543 ACRP10323 421 aa22.58■■□□□ 1.21
TSPAN4-209ENST00000409543 HOXD8P13378 290 aaPredicted RBP22.58■■□□□ 1.21
TSPAN4-209ENST00000409543 UBA1P22314 1058 aaKnown RBP22.58■■□□□ 1.21
TSPAN4-209ENST00000409543 ICAM3P32942 547 aa22.58■■□□□ 1.21
TSPAN4-209ENST00000409543 RTN1Q16799 776 aa22.58■■□□□ 1.21
TSPAN4-209ENST00000409543 RASIP1Q5U651 963 aa22.58■■□□□ 1.21
TSPAN4-209ENST00000409543 PPP1R13LQ8WUF5 828 aa22.58■■□□□ 1.21
TSPAN4-209ENST00000409543 SNX14Q9Y5W7 946 aa22.58■■□□□ 1.21
TSPAN4-209ENST00000409543 KLF18A0A0U1RQI7 1052 aa22.57■■□□□ 1.2
TSPAN4-209ENST00000409543 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-209ENST00000409543 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-209ENST00000409543 SPATA31C2B4DYI2 1134 aa22.57■■□□□ 1.2
TSPAN4-209ENST00000409543 PPFIA4O75335 1185 aa22.57■■□□□ 1.2
TSPAN4-209ENST00000409543 RCAN1P53805 252 aa22.57■■□□□ 1.2
TSPAN4-209ENST00000409543 CHMP4BP1P59074 171 aa22.57■■□□□ 1.2
TSPAN4-209ENST00000409543 ZNF697Q5TEC3 545 aa22.57■■□□□ 1.2
TSPAN4-209ENST00000409543 PCNX4Q63HM2 1172 aa22.57■■□□□ 1.2
TSPAN4-209ENST00000409543 GPKOWQ92917 476 aaPredicted RBP eCLIP22.57■■□□□ 1.2
TSPAN4-209ENST00000409543 SPATA33Q96N06 139 aa22.57■■□□□ 1.2
TSPAN4-209ENST00000409543 KATNAL1Q9BW62 490 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms