RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ZSCAN22P10073 491 aaPredicted RBP18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 SLC30A10Q6XR72 485 aa18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 BRAPQ7Z569 592 aa18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 FCHSD1Q86WN1 690 aa18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 NOSTRINQ8IVI9 506 aa18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 OXER1Q8TDS5 423 aa18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 SYTL5Q8TDW5 730 aaPredicted RBP18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 TBC1D5Q92609 795 aa18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 FGD4Q96M96 766 aa18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 CHMP5Q9NZZ3 219 aa18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 CNPY2Q9Y2B0 182 aa18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 MKI67P46013 3256 aaKnown RBP18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 MYH15Q9Y2K3 1946 aa18.85■□□□□ 0.61
TSPAN4-208ENST00000409531 BRD1O95696 1058 aa18.84■□□□□ 0.61
TSPAN4-208ENST00000409531 SNAI1O95863 264 aaPredicted RBP18.84■□□□□ 0.61
TSPAN4-208ENST00000409531 NR5A1Q13285 461 aa18.84■□□□□ 0.61
TSPAN4-208ENST00000409531 NONOQ15233 471 aaKnown RBP eCLIP18.84■□□□□ 0.619e-6■■■□□ 19
TSPAN4-208ENST00000409531 HABP4Q5JVS0 413 aaKnown RBP18.84■□□□□ 0.61
TSPAN4-208ENST00000409531 JAKMIP3Q5VZ66 844 aa18.84■□□□□ 0.61
TSPAN4-208ENST00000409531 DNERQ8NFT8 737 aa18.84■□□□□ 0.61
TSPAN4-208ENST00000409531 ADD3Q9UEY8 706 aaKnown RBP18.84■□□□□ 0.61
TSPAN4-208ENST00000409531 SOWAHBA6NEL2 793 aa18.83■□□□□ 0.61
TSPAN4-208ENST00000409531 B4DLN1 442 aa18.83■□□□□ 0.61
TSPAN4-208ENST00000409531 ZNF865P0CJ78 1059 aaPredicted RBP18.83■□□□□ 0.61
TSPAN4-208ENST00000409531 RASGRP4Q8TDF6 673 aa18.83■□□□□ 0.61
TSPAN4-208ENST00000409531 TNFRSF25Q93038 417 aa18.83■□□□□ 0.61
TSPAN4-208ENST00000409531 PAWRQ96IZ0 340 aaKnown RBP18.83■□□□□ 0.61
TSPAN4-208ENST00000409531 MPHOSPH6Q99547 160 aaKnown RBP18.83■□□□□ 0.61
TSPAN4-208ENST00000409531 ANO3Q9BYT9 981 aa18.83■□□□□ 0.61
TSPAN4-208ENST00000409531 LOC102724159A0A0B4J2E5 919 aa18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 ASB14A6NK59 587 aa18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 F13A1P00488 732 aa18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 PKP1Q13835 747 aa18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 PWP2Q15269 919 aaKnown RBP18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 PIK3AP1Q6ZUJ8 805 aa18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 NECAB2Q7Z6G3 386 aa18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 FERMT3Q86UX7 667 aa18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 NSUN6Q8TEA1 469 aaKnown RBP18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 RMDN3Q96TC7 470 aa18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 ABHD16BQ9H3Z7 469 aa18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 TMEM260Q9NX78 707 aa18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 NOL7Q9UMY1 257 aaKnown RBP18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 ATP6V1DQ9Y5K8 247 aa18.82■□□□□ 0.6
TSPAN4-208ENST00000409531 KIF28PB7ZC32 967 aa18.81■□□□□ 0.6
TSPAN4-208ENST00000409531 ADAMTS3O15072 1205 aa18.81■□□□□ 0.6
TSPAN4-208ENST00000409531 MNX1P50219 401 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-208ENST00000409531 ACVR2BQ13705 512 aa18.81■□□□□ 0.6
TSPAN4-208ENST00000409531 ARHGEF16Q5VV41 709 aa18.81■□□□□ 0.6
TSPAN4-208ENST00000409531 ARMCX2Q7L311 632 aa18.81■□□□□ 0.6
TSPAN4-208ENST00000409531 TAAR1Q96RJ0 339 aa18.81■□□□□ 0.6
TSPAN4-208ENST00000409531 COL20A1Q9P218 1284 aa18.81■□□□□ 0.6
TSPAN4-208ENST00000409531 FRMPD4Q14CM0 1322 aa18.81■□□□□ 0.6
TSPAN4-208ENST00000409531 AKR1A1P14550 325 aa18.8■□□□□ 0.6
TSPAN4-208ENST00000409531 SREBF1P36956 1147 aa18.8■□□□□ 0.6
TSPAN4-208ENST00000409531 TRAPPC10P48553 1259 aa18.8■□□□□ 0.6
TSPAN4-208ENST00000409531 RESTQ13127 1097 aa18.8■□□□□ 0.6
TSPAN4-208ENST00000409531 ANO1Q5XXA6 986 aa18.8■□□□□ 0.6
TSPAN4-208ENST00000409531 ARRDC4Q8NCT1 418 aa18.8■□□□□ 0.6
TSPAN4-208ENST00000409531 TBCKQ8TEA7 893 aa18.8■□□□□ 0.6
TSPAN4-208ENST00000409531 PURBQ96QR8 312 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-208ENST00000409531 IWS1Q96ST2 819 aa18.8■□□□□ 0.6
TSPAN4-208ENST00000409531 NAP1L4Q99733 375 aaKnown RBP18.8■□□□□ 0.6
TSPAN4-208ENST00000409531 HTATIP2Q9BUP3 242 aa18.8■□□□□ 0.6
TSPAN4-208ENST00000409531 PXMP2Q9NR77 195 aa18.8■□□□□ 0.6
TSPAN4-208ENST00000409531 FAM184BQ9ULE4 1060 aa18.8■□□□□ 0.6
TSPAN4-208ENST00000409531 USP11P51784 963 aa18.79■□□□□ 0.6
TSPAN4-208ENST00000409531 INF2Q27J81 1249 aa18.79■□□□□ 0.6
TSPAN4-208ENST00000409531 RILPL1Q5EBL4 403 aa18.79■□□□□ 0.6
TSPAN4-208ENST00000409531 FOXD4L5Q5VV16 416 aaPredicted RBP18.79■□□□□ 0.6
TSPAN4-208ENST00000409531 XRRA1Q6P2D8 792 aa18.79■□□□□ 0.6
TSPAN4-208ENST00000409531 NEK8Q86SG6 692 aa18.79■□□□□ 0.6
TSPAN4-208ENST00000409531 DIS3LQ8TF46 1054 aaKnown RBP18.79■□□□□ 0.6
TSPAN4-208ENST00000409531 FOXD4L4Q8WXT5 416 aaPredicted RBP18.79■□□□□ 0.6
TSPAN4-208ENST00000409531 PGBD1Q96JS3 809 aa18.79■□□□□ 0.6
TSPAN4-208ENST00000409531 ZHX1Q9UKY1 873 aaPredicted RBP18.79■□□□□ 0.6
TSPAN4-208ENST00000409531 ZDHHC9Q9Y397 364 aa18.79■□□□□ 0.6
TSPAN4-208ENST00000409531 MCM3APO60318 1980 aa18.79■□□□□ 0.6
TSPAN4-208ENST00000409531 ASTN1O14525 1302 aa18.79■□□□□ 0.6
TSPAN4-208ENST00000409531 RARBP10826 455 aa18.78■□□□□ 0.6
TSPAN4-208ENST00000409531 EIF2AK2P19525 551 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-208ENST00000409531 ALDH5A1P51649 535 aaPredicted RBP18.78■□□□□ 0.6
TSPAN4-208ENST00000409531 ARHGAP4P98171 946 aa18.78■□□□□ 0.6
TSPAN4-208ENST00000409531 PGM5Q15124 567 aa18.78■□□□□ 0.6
TSPAN4-208ENST00000409531 MYSM1Q5VVJ2 828 aa18.78■□□□□ 0.6
TSPAN4-208ENST00000409531 MORC4Q8TE76 937 aa18.78■□□□□ 0.6
TSPAN4-208ENST00000409531 PDCD2LQ9BRP1 358 aa18.78■□□□□ 0.6
TSPAN4-208ENST00000409531 C11orf49Q9H6J7 331 aa18.78■□□□□ 0.6
TSPAN4-208ENST00000409531 CYP3A4P08684 503 aa18.77■□□□□ 0.6
TSPAN4-208ENST00000409531 CCND2P30279 289 aa18.77■□□□□ 0.6
TSPAN4-208ENST00000409531 CCDC144BQ3MJ40 725 aa18.77■□□□□ 0.6
TSPAN4-208ENST00000409531 EARS2Q5JPH6 523 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-208ENST00000409531 PCNX4Q63HM2 1172 aa18.77■□□□□ 0.6
TSPAN4-208ENST00000409531 DPF3Q92784 378 aa18.77■□□□□ 0.6
TSPAN4-208ENST00000409531 KATNBL1Q9H079 304 aa18.77■□□□□ 0.6
TSPAN4-208ENST00000409531 TCHHQ07283 1943 aa18.77■□□□□ 0.6
TSPAN4-208ENST00000409531 DNM1LO00429 736 aa18.76■□□□□ 0.59
TSPAN4-208ENST00000409531 STAM2O75886 525 aa18.76■□□□□ 0.59
TSPAN4-208ENST00000409531 NR3C2P08235 984 aa18.76■□□□□ 0.59
TSPAN4-208ENST00000409531 COL6A1P12109 1028 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms