RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 NBPF11Q86T75 865 aa18.43■□□□□ 0.54
PCDHA13-202ENST00000409494 RPS6KC1Q96S38 1066 aa18.43■□□□□ 0.54
PCDHA13-202ENST00000409494 HOXD10P28358 340 aa18.42■□□□□ 0.54
PCDHA13-202ENST00000409494 CYP4A11Q02928 519 aa18.42■□□□□ 0.54
PCDHA13-202ENST00000409494 C12orf60Q5U649 245 aa18.42■□□□□ 0.54
PCDHA13-202ENST00000409494 RRAGAQ7L523 313 aa18.42■□□□□ 0.54
PCDHA13-202ENST00000409494 POMGNT1Q8WZA1 660 aa18.42■□□□□ 0.54
PCDHA13-202ENST00000409494 CEP170P1Q96L14 293 aa18.42■□□□□ 0.54
PCDHA13-202ENST00000409494 PCDHA5Q9Y5H7 936 aa18.42■□□□□ 0.54
PCDHA13-202ENST00000409494 KDM6AO15550 1401 aaPredicted RBP18.42■□□□□ 0.54
PCDHA13-202ENST00000409494 LPAR1Q92633 364 aa18.42■□□□□ 0.54
PCDHA13-202ENST00000409494 KRT76Q01546 638 aa18.42■□□□□ 0.54
PCDHA13-202ENST00000409494 GPR101Q96P66 508 aaPredicted RBP18.42■□□□□ 0.54
PCDHA13-202ENST00000409494 RIOK1Q9BRS2 568 aaKnown RBP18.42■□□□□ 0.54
PCDHA13-202ENST00000409494 HNRNPDLO14979 420 aaKnown RBP18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 GNAT1P11488 350 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 ZNF658Q5TYW1 1059 aaPredicted RBP18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 LSM14BQ9BX40 385 aaKnown RBP18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 INO80BQ9C086 356 aaPredicted RBP18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 KMT5AQ9NQR1 393 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 ZHX2Q9Y6X8 837 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 C19orf81C9J6K1 198 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 CLEC17AQ6ZS10 378 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 FBXO33Q7Z6M2 555 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 TLR3O15455 904 aaKnown RBP18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 RPS6KA1Q15418 735 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 SLFN12LQ6IEE8 588 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 MCPH1Q8NEM0 835 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 GIMAP7Q8NHV1 300 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 PSDA5PKW4 1024 aaPredicted RBP18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 SFNP31947 248 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 RESTQ13127 1097 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 TRIM11Q96F44 468 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 CLIC6Q96NY7 704 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 NACA2Q9H009 215 aa18.41■□□□□ 0.54
PCDHA13-202ENST00000409494 CALRP27797 417 aaKnown RBP18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 KIF11P52732 1056 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 TKFCQ3LXA3 575 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 SPOUT1Q5T280 376 aaKnown RBP18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 KCNV1Q6PIU1 500 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 PDZD4Q76G19 769 aaPredicted RBP18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 AGBL3Q8NEM8 1001 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 PARVGQ9HBI0 331 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 MFAP3P55082 362 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 NEDD9Q14511 834 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 SEPT14Q6ZU15 432 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 TBC1D10CQ8IV04 446 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 ZNF710Q8N1W2 664 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 TRIM58Q8NG06 486 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 P2RX5Q93086 422 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 NT5C1BQ96P26 610 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 HADHQ16836 314 aaKnown RBP18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 ENAHQ8N8S7 591 aaPredicted RBP18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 CCDC114Q96M63 670 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 MXD3Q9BW11 206 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 IFIH1Q9BYX4 1025 aaKnown RBP18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 SERPINA10Q9UK55 444 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 USP17L15C9J2P7 530 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 USP17L13C9JLJ4 530 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 USP17L11C9JVI0 530 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 USP17L18D6R9N7 530 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 USP17L22D6RA61 530 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 USP17L17D6RBQ6 530 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 USP17L19D6RCP7 530 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 USP17L20D6RJB6 530 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 PPM1FP49593 454 aaPredicted RBP18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 USP17L24Q0WX57 530 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 TRMT44Q8IYL2 757 aaKnown RBP18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 SLC39A2Q9NP94 309 aa18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 FAM207AQ9NSI2 230 aaPredicted RBP18.4■□□□□ 0.54
PCDHA13-202ENST00000409494 F5H6K3 240 aa18.39■□□□□ 0.54
PCDHA13-202ENST00000409494 LARGE1O95461 756 aa18.39■□□□□ 0.54
PCDHA13-202ENST00000409494 KLRC3Q07444 240 aa18.39■□□□□ 0.54
PCDHA13-202ENST00000409494 OTUD6BQ8N6M0 293 aa18.39■□□□□ 0.54
PCDHA13-202ENST00000409494 PDXDC2PQ6P474 469 aa18.39■□□□□ 0.53
PCDHA13-202ENST00000409494 ANKRD36BP1Q96IX9 119 aa18.39■□□□□ 0.53
PCDHA13-202ENST00000409494 HAUS4Q9H6D7 363 aa18.39■□□□□ 0.53
PCDHA13-202ENST00000409494 CDC25BP30305 580 aa18.39■□□□□ 0.53
PCDHA13-202ENST00000409494 PDE6CP51160 858 aa18.39■□□□□ 0.53
PCDHA13-202ENST00000409494 ETF1P62495 437 aaKnown RBP18.39■□□□□ 0.53
PCDHA13-202ENST00000409494 EXOC3L4Q17RC7 722 aa18.39■□□□□ 0.53
PCDHA13-202ENST00000409494 CFAP221Q4G0U5 840 aa18.39■□□□□ 0.53
PCDHA13-202ENST00000409494 PEX26Q7Z412 305 aa18.39■□□□□ 0.53
PCDHA13-202ENST00000409494 NYAP2Q9P242 653 aa18.39■□□□□ 0.53
PCDHA13-202ENST00000409494 PTK2Q05397 1052 aa18.39■□□□□ 0.53
PCDHA13-202ENST00000409494 RDH13Q8NBN7 331 aa18.39■□□□□ 0.53
PCDHA13-202ENST00000409494 CEP95Q96GE4 821 aa18.39■□□□□ 0.53
PCDHA13-202ENST00000409494 OSBPL5Q9H0X9 879 aaPredicted RBP18.39■□□□□ 0.53
PCDHA13-202ENST00000409494 SLC26A4O43511 780 aa18.38■□□□□ 0.53
PCDHA13-202ENST00000409494 LDHAP00338 332 aaKnown RBP18.38■□□□□ 0.53
PCDHA13-202ENST00000409494 LRRC63Q05C16 580 aa18.38■□□□□ 0.53
PCDHA13-202ENST00000409494 RSBN1LQ6PCB5 846 aaPredicted RBP18.38■□□□□ 0.53
PCDHA13-202ENST00000409494 FAM151AQ8WW52 585 aa18.38■□□□□ 0.53
PCDHA13-202ENST00000409494 AMFRQ9UKV5 643 aa18.38■□□□□ 0.53
PCDHA13-202ENST00000409494 A6NNZ2 444 aa18.38■□□□□ 0.53
PCDHA13-202ENST00000409494 CCNE1P24864 410 aa18.38■□□□□ 0.53
PCDHA13-202ENST00000409494 PDIA6Q15084 440 aa18.38■□□□□ 0.53
PCDHA13-202ENST00000409494 MAN2A1Q16706 1144 aa18.38■□□□□ 0.53
PCDHA13-202ENST00000409494 ARHGAP44Q17R89 818 aa18.38■□□□□ 0.53
PCDHA13-202ENST00000409494 TUBB8Q3ZCM7 444 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms