RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 TRAPPC3LQ5T215 181 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 SPATA1Q5VX52 437 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 SCYL3Q8IZE3 742 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 CSGALNACT2Q8N6G5 542 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 CFAP61Q8NHU2 1237 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 CUL5Q93034 780 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 PANX2Q96RD6 677 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 PNKPQ96T60 521 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 CTTNBP2NLQ9P2B4 639 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 ANAPC4Q9UJX5 808 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 HPCAL4Q9UM19 191 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 IKBKGQ9Y6K9 419 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 FPGT-TNNI3KV9GXZ4 949 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 SALL1Q9NSC2 1324 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 RPAP1Q9BWH6 1393 aaPredicted RBP6.42□□□□□ -1.38
HDAC9-203ENST00000406072 ECM29Q5VYK3 1845 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 VWA3AA6NCI4 1184 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 MINDY4BA8MYZ0 360 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 GYS1P13807 737 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 ATP2A2P16615 1042 aaKnown RBP6.42□□□□□ -1.38
HDAC9-203ENST00000406072 RAD23BP54727 409 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 PTPROQ16827 1216 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 CCDC152Q4G0S7 254 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 NOA1Q8NC60 698 aaKnown RBP6.42□□□□□ -1.38
HDAC9-203ENST00000406072 MRRFQ96E11 262 aaKnown RBP6.42□□□□□ -1.38
HDAC9-203ENST00000406072 PLIN2Q99541 437 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 UBA5Q9GZZ9 404 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 RMI1Q9H9A7 625 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 CABP5Q9NP86 173 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 BSDC1Q9NW68 430 aaPredicted RBP6.42□□□□□ -1.38
HDAC9-203ENST00000406072 RTEL1Q9NZ71 1219 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 HDAC6Q9UBN7 1215 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 PNPLA7Q6ZV29 1317 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 KCNK3O14649 394 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 IRS4O14654 1257 aaPredicted RBP6.42□□□□□ -1.38
HDAC9-203ENST00000406072 ANP32DO95626 131 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 CA8P35219 290 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 RAPGEF1Q13905 1077 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 GRAMD4Q6IC98 578 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 PTF1AQ7RTS3 328 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 UBE3BQ7Z3V4 1068 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 P3H4Q92791 437 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 CRAMP1Q96RY5 1269 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 FAM207AQ9NSI2 230 aaPredicted RBP6.42□□□□□ -1.38
HDAC9-203ENST00000406072 PLAAQ9Y263 795 aa6.42□□□□□ -1.38
HDAC9-203ENST00000406072 FER1L6Q2WGJ9 1857 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 LRRIQ3A6PVS8 624 aaPredicted RBP6.41□□□□□ -1.38
HDAC9-203ENST00000406072 POLRMTO00411 1230 aaKnown RBP6.41□□□□□ -1.38
HDAC9-203ENST00000406072 COBLO75128 1261 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 NDUFA10O95299 355 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 FERP16591 822 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 MSH2P43246 934 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 CYP27A1Q02318 531 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 KLC1Q07866 573 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 RESTQ13127 1097 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 KIAA0825Q8IV33 1275 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 EEF2KMTQ96G04 330 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 HAUS7Q99871 368 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 CENPKQ9BS16 269 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.41□□□□□ -1.38
HDAC9-203ENST00000406072 BICDL2A1A5D9 508 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 CFAP73A6NFT4 308 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 KCNJ18B7U540 433 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 CHGBP05060 677 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 MDH1P40925 334 aaKnown RBP6.41□□□□□ -1.38
HDAC9-203ENST00000406072 ADCY2Q08462 1091 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 KCNJ12Q14500 433 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 RILPL1Q5EBL4 403 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 THEMIS2Q5TEJ8 643 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 NAA35Q5VZE5 725 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 KRT40Q6A162 431 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 RCSD1Q6JBY9 416 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 TMEM154Q6P9G4 183 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.41□□□□□ -1.38
HDAC9-203ENST00000406072 APBB1IPQ7Z5R6 666 aaPredicted RBP6.41□□□□□ -1.38
HDAC9-203ENST00000406072 MAP7D3Q8IWC1 876 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 REXO1L1PQ8IX06 675 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 SNRNP27Q8WVK2 155 aaKnown RBP6.41□□□□□ -1.38
HDAC9-203ENST00000406072 NELFBQ8WX92 580 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 FUCA2Q9BTY2 467 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 VPS33BQ9H267 617 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 ALDH8A1Q9H2A2 487 aaPredicted RBP6.41□□□□□ -1.38
HDAC9-203ENST00000406072 CNNM1Q9NRU3 951 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 DLGAP2Q9P1A6 1054 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 ATP8A1Q9Y2Q0 1164 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 CDK5RAP2Q96SN8 1893 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 ESYT3A0FGR9 886 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 TMEM110-MUSTN1A8MSY1 372 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 KRIT1O00522 736 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 TPD52L2O43399 206 aaKnown RBP6.41□□□□□ -1.38
HDAC9-203ENST00000406072 KRT14P02533 472 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 VASPP50552 380 aaPredicted RBP6.41□□□□□ -1.38
HDAC9-203ENST00000406072 EHHADHQ08426 723 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 ARMC3Q5W041 872 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 RRAGAQ7L523 313 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 ARHGAP22Q7Z5H3 698 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 LINC00301Q8NCQ3 95 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 PARD3BQ8TEW8 1205 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 DPF2Q92785 391 aa6.41□□□□□ -1.38
HDAC9-203ENST00000406072 PLVAPQ9BX97 442 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms