RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 COBLO75128 1261 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 NR3C2P08235 984 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 U2AF2P26368 475 aaKnown RBP eCLIP10.15□□□□□ -0.781e-9■■■□□ 15.6
BRCC3-206ENST00000399042 ALDH5A1P51649 535 aaPredicted RBP10.15□□□□□ -0.78
BRCC3-206ENST00000399042 LBX1P52954 281 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 ARHGAP4P98171 946 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 CEBPZQ03701 1054 aaKnown RBP10.15□□□□□ -0.78
BRCC3-206ENST00000399042 PRKCZQ05513 592 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 PKP1Q13835 747 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 SF3A1Q15459 793 aaKnown RBP10.15□□□□□ -0.78
BRCC3-206ENST00000399042 GNPTABQ3T906 1256 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 RILPL1Q5EBL4 403 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 MORN1Q5T089 497 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 SEPT14Q6ZU15 432 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 EEPD1Q7L9B9 569 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 NEK8Q86SG6 692 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 NLRX1Q86UT6 975 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 FAM133AQ8N9E0 248 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.78
BRCC3-206ENST00000399042 SHISA4Q96DD7 197 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 IWS1Q96ST2 819 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 APBA2Q99767 749 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 COL20A1Q9P218 1284 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 SRRDQ9UH36 339 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 TCEAL9Q9UHQ7 104 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 CEP131Q9UPN4 1083 aa10.15□□□□□ -0.78
BRCC3-206ENST00000399042 SOWAHBA6NEL2 793 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 FOXN1O15353 648 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 BAG4O95429 457 aaKnown RBP10.14□□□□□ -0.79
BRCC3-206ENST00000399042 BRD1O95696 1058 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 MCM7P33993 719 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 SREBF1P36956 1147 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 TRAPPC10P48553 1259 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 CLK2P49760 499 aaKnown RBP10.14□□□□□ -0.79
BRCC3-206ENST00000399042 USP11P51784 963 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 PGM5Q15124 567 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 ZNF174Q15697 407 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 ZNF792Q3KQV3 632 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 PRR16Q569H4 304 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 NOM1Q5C9Z4 860 aaKnown RBP10.14□□□□□ -0.79
BRCC3-206ENST00000399042 TTC38Q5R3I4 469 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 XRRA1Q6P2D8 792 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 TRMT44Q8IYL2 757 aaKnown RBP10.14□□□□□ -0.79
BRCC3-206ENST00000399042 JMYQ8N9B5 988 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 PDCD2LQ9BRP1 358 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 DDX25Q9UHL0 483 aaKnown RBP10.14□□□□□ -0.79
BRCC3-206ENST00000399042 ZHX1Q9UKY1 873 aaPredicted RBP10.14□□□□□ -0.79
BRCC3-206ENST00000399042 GABRQQ9UN88 632 aa10.14□□□□□ -0.79
BRCC3-206ENST00000399042 DIS3Q9Y2L1 958 aaKnown RBP10.14□□□□□ -0.79
BRCC3-206ENST00000399042 FAM205CA6NFA0 338 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 ADAMTS3O15072 1205 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 ADCY3O60266 1144 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 NEMFO60524 1076 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 EIF3JO75822 258 aaKnown RBP10.13□□□□□ -0.79
BRCC3-206ENST00000399042 GCFC2P16383 781 aaKnown RBP10.13□□□□□ -0.79
BRCC3-206ENST00000399042 CNGA1P29973 690 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 PRMT2P55345 433 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 GHRHRQ02643 423 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 RESTQ13127 1097 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 STK38Q15208 465 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 NPY5RQ15761 445 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 TPRNQ4KMQ1 711 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 MYSM1Q5VVJ2 828 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 PCNX4Q63HM2 1172 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 FAM173BQ6P4H8 233 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.13□□□□□ -0.79
BRCC3-206ENST00000399042 ARMCX2Q7L311 632 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 PLA2G4DQ86XP0 818 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 NPLOC4Q8TAT6 608 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 MAML3Q96JK9 1138 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 CDHR1Q96JP9 859 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 TINF2Q9BSI4 451 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 PKD2L1Q9P0L9 805 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 TFIP11Q9UBB9 837 aaKnown RBP10.13□□□□□ -0.79
BRCC3-206ENST00000399042 GJD2Q9UKL4 321 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 CFAP45Q9UL16 551 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 MRVI1Q9Y6F6 885 aa10.13□□□□□ -0.79
BRCC3-206ENST00000399042 DNAJC25-GNG10A0A024R161 153 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 LOC102724159A0A0B4J2E5 919 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 GOLGA6L4A6NEF3 574 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 M0R2N6 131 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 STAM2O75886 525 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 BMP15O95972 392 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 HSPA8P11142 646 aaKnown RBP10.12□□□□□ -0.79
BRCC3-206ENST00000399042 XRCC5P13010 732 aaKnown RBP10.12□□□□□ -0.79
BRCC3-206ENST00000399042 CTGFP29279 349 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 CYP2C19P33261 490 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 KRT85P78386 507 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 SETQ01105 290 aaPredicted RBP10.12□□□□□ -0.79
BRCC3-206ENST00000399042 MTMR1Q13613 665 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 PWP2Q15269 919 aaKnown RBP10.12□□□□□ -0.79
BRCC3-206ENST00000399042 CALCRLQ16602 461 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 CCL14Q16627 93 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 CEP55Q53EZ4 464 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 EARS2Q5JPH6 523 aaKnown RBP10.12□□□□□ -0.79
BRCC3-206ENST00000399042 OTOP1Q7RTM1 612 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 VSIG10LQ86VR7 867 aa10.12□□□□□ -0.79
BRCC3-206ENST00000399042 FBXO16Q8IX29 292 aaPredicted RBP10.12□□□□□ -0.79
BRCC3-206ENST00000399042 MSL3Q8N5Y2 521 aaKnown RBP10.12□□□□□ -0.79
BRCC3-206ENST00000399042 IL31RAQ8NI17 732 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms