RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 DISC1Q9NRI5 854 aa12.6□□□□□ -0.39
RCC1-204ENST00000398958 TFR2Q9UP52 801 aa12.6□□□□□ -0.39
RCC1-204ENST00000398958 COL11A2P13942 1736 aaPredicted RBP12.59□□□□□ -0.39
RCC1-204ENST00000398958 TDP2O95551 362 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 PLCG1P19174 1290 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 SLC1A4P43007 532 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 CCDC178Q5BJE1 867 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 CCDC174Q6PII3 467 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 EFCAB13Q8IY85 973 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 ELOA2Q8IYF1 753 aaPredicted RBP12.59□□□□□ -0.39
RCC1-204ENST00000398958 MICALL1Q8N3F8 863 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 GSDMAQ96QA5 445 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 PKD2L1Q9P0L9 805 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 MYO6Q9UM54 1294 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 DDX60LQ5H9U9 1706 aaKnown RBP12.59□□□□□ -0.39
RCC1-204ENST00000398958 DLEC1Q9Y238 1755 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 LOC102724159A0A0B4J2E5 919 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 FCER1AP12319 257 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 PLCG2P16885 1265 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 PWP2Q15269 919 aaKnown RBP12.59□□□□□ -0.39
RCC1-204ENST00000398958 DLGAP5Q15398 846 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 SOGA3Q5TF21 947 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 ADGRF4Q8IZF3 695 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 TRIML1Q8N9V2 468 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 CCDC148Q8NFR7 591 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 HOMER2Q9NSB8 354 aa12.59□□□□□ -0.39
RCC1-204ENST00000398958 POTEMA6NI47 508 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 SLC37A4O43826 429 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 SORBS3O60504 671 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 PEX10O60683 326 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 SYF2O95926 243 aaKnown RBP12.58□□□□□ -0.4
RCC1-204ENST00000398958 ERCC5P28715 1186 aaPredicted RBP12.58□□□□□ -0.4
RCC1-204ENST00000398958 FILIP1LQ4L180 1135 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 DYMQ7RTS9 669 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 TADA2BQ86TJ2 420 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 C7orf43Q8WVR3 580 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.58□□□□□ -0.4
RCC1-204ENST00000398958 ADD3Q9UEY8 706 aaKnown RBP12.58□□□□□ -0.4
RCC1-204ENST00000398958 NAV1Q8NEY1 1877 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 GAKO14976 1311 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 MYH8P13535 1937 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 GTPBP6O43824 516 aaPredicted RBP12.58□□□□□ -0.4
RCC1-204ENST00000398958 MARCH6O60337 910 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 PPP1R11O60927 126 aaPredicted RBP12.58□□□□□ -0.4
RCC1-204ENST00000398958 BMP15O95972 392 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 GNAQP50148 359 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 CXCL9Q07325 125 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 PAK1Q13153 545 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 WDR93Q6P2C0 686 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 CNGA4Q8IV77 575 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 NUDT12Q9BQG2 462 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 FBXO28Q9NVF7 368 aa12.58□□□□□ -0.4
RCC1-204ENST00000398958 A0A1W2PRG0 241 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 SSBP05455 408 aaKnown RBP eCLIP12.57□□□□□ -0.4
RCC1-204ENST00000398958 KLK7P49862 253 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 CACNB1Q02641 598 aaPredicted RBP12.57□□□□□ -0.4
RCC1-204ENST00000398958 ICA1Q05084 483 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 STRIP1Q5VSL9 837 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 CABP7Q86V35 215 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 RIN2Q8WYP3 895 aaPredicted RBP12.57□□□□□ -0.4
RCC1-204ENST00000398958 TBC1D5Q92609 795 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 ANKS1AQ92625 1134 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 GDAP1L1Q96MZ0 367 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 NCAPGQ9BPX3 1015 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 SMCHD1A6NHR9 2005 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 ROBO3Q96MS0 1386 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 A0A087WUV0 522 aaPredicted RBP12.57□□□□□ -0.4
RCC1-204ENST00000398958 KCNJ18B7U540 433 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 GYPCP04921 128 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 LONP1P36776 959 aaKnown RBP12.57□□□□□ -0.4
RCC1-204ENST00000398958 PBX1P40424 430 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 TRAPPC10P48553 1259 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 ERVK-24P63145 666 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 KCNJ12Q14500 433 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 NONOQ15233 471 aaKnown RBP eCLIP12.57□□□□□ -0.44e-6■■□□□ 12.4
RCC1-204ENST00000398958 KIAA1755Q5JYT7 1200 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 GPATCH11Q8N954 259 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 MYCBPQ99417 103 aaPredicted RBP12.57□□□□□ -0.4
RCC1-204ENST00000398958 SLF1Q9BQI6 1058 aa12.57□□□□□ -0.4
RCC1-204ENST00000398958 PRPF6O94906 941 aaKnown RBP12.56□□□□□ -0.4
RCC1-204ENST00000398958 TTLL1O95922 423 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 HMGB2P26583 209 aaKnown RBP12.56□□□□□ -0.4
RCC1-204ENST00000398958 ARHGAP25P42331 645 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 UBXN1Q04323 297 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 CDKAL1Q5VV42 579 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 TMTC1Q8IUR5 882 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 REXO1Q8N1G1 1221 aaKnown RBP12.56□□□□□ -0.4
RCC1-204ENST00000398958 ZMYND12Q9H0C1 365 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 VIPAS39Q9H9C1 493 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 C6orf50Q9HD87 102 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 SLC39A2Q9NP94 309 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 TCP11L1Q9NUJ3 509 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 HPCAL4Q9UM19 191 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 CPP00450 1065 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 AARSP49588 968 aaKnown RBP eCLIP12.56□□□□□ -0.4
RCC1-204ENST00000398958 ASIC1P78348 528 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 STK4Q13043 487 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 ABCB5Q2M3G0 1257 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 MAP9Q49MG5 647 aa12.56□□□□□ -0.4
RCC1-204ENST00000398958 MMS22LQ6ZRQ5 1243 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms