RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 KIF11P52732 1056 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 ARHGAP44Q17R89 818 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 ODF2Q5BJF6 829 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 UHMK1Q8TAS1 419 aaKnown RBP5.44□□□□□ -1.54
SMAD4-202ENST00000398417 DDX12PQ92771 950 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 CEP95Q96GE4 821 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 EMILIN3Q9NT22 766 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 PCDHB13Q9Y5F0 798 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 RCCD1A6NED2 376 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 SMIM23A6NLE4 172 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 PPEF1O14829 653 aaPredicted RBP5.44□□□□□ -1.54
SMAD4-202ENST00000398417 E2F4Q16254 413 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 ZFYVE27Q5T4F4 411 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 NFRKBQ6P4R8 1299 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 SLC30A10Q6XR72 485 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 KIAA0825Q8IV33 1275 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 NUDT12Q9BQG2 462 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 THRAP3Q9Y2W1 955 aaKnown RBP5.44□□□□□ -1.54
SMAD4-202ENST00000398417 USP17L15C9J2P7 530 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 USP17L13C9JLJ4 530 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 USP17L11C9JVI0 530 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 USP17L18D6R9N7 530 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 USP17L22D6RA61 530 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 USP17L17D6RBQ6 530 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 USP17L19D6RCP7 530 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 USP17L20D6RJB6 530 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 PLEKP08567 350 aaPredicted RBP5.44□□□□□ -1.54
SMAD4-202ENST00000398417 USP17L24Q0WX57 530 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 COASYQ13057 564 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 RCSD1Q6JBY9 416 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 USP17L6PQ6QN14 398 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 C4orf32Q8N8J7 132 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 MTRQ99707 1265 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 LRRC1Q9BTT6 524 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 IFT172Q9UG01 1749 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 TNS2Q63HR2 1409 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 H0YHG0 523 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 FANCGO15287 622 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 TNFAIP3P21580 790 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 NPY5RQ15761 445 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 SFR1Q86XK3 245 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 ERMNQ8TAM6 284 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 ADAM21Q9UKJ8 722 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 DUSP10Q9Y6W6 482 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 BCL9O00512 1426 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 SLC37A4O43826 429 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 KLRC4O43908 158 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 SLC10A5Q5PT55 438 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 NT5DC1Q5TFE4 455 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 UNC13DQ70J99 1090 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 TSGA10Q9BZW7 698 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 PALM3A6NDB9 673 aaPredicted RBP5.44□□□□□ -1.54
SMAD4-202ENST00000398417 SLC9C1Q4G0N8 1177 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 KCNK18Q7Z418 384 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 COG1Q8WTW3 980 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 ANO3Q9BYT9 981 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 PACSIN2Q9UNF0 486 aaPredicted RBP5.44□□□□□ -1.54
SMAD4-202ENST00000398417 EPHB6O15197 1021 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 CFBP00751 764 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 PLA2G4BP0C869 781 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 EHHADHQ08426 723 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 TMEM132AQ24JP5 1023 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 NAA35Q5VZE5 725 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 TBC1D16Q8TBP0 767 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 FAM71BQ8TC56 605 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 CUEDC2Q9H467 287 aa5.44□□□□□ -1.54
SMAD4-202ENST00000398417 SPATA31A5Q5VU36 1347 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 SPATA31A7Q8IWB4 1347 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 ESYT3A0FGR9 886 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 GOLGA6BA6NDN3 693 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 LAD1O00515 517 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 ZRANB2O95218 330 aaKnown RBP eCLIP5.43□□□□□ -1.54
SMAD4-202ENST00000398417 ACTN2P35609 894 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 SLC35G1Q2M3R5 365 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 RBM26Q5T8P6 1007 aaKnown RBP5.43□□□□□ -1.54
SMAD4-202ENST00000398417 PRR5LQ6MZQ0 368 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 RTFDC1Q9BY42 306 aaPredicted RBP5.43□□□□□ -1.54
SMAD4-202ENST00000398417 TRIM9Q9C026 710 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 MYO1AQ9UBC5 1043 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 SAMM50Q9Y512 469 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 CCDC151A5D8V7 595 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 ZEB2O60315 1214 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 CAPN15O75808 1086 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 CDC37Q16543 378 aaPredicted RBP5.43□□□□□ -1.54
SMAD4-202ENST00000398417 SELENOOQ9BVL4 669 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 LACRTQ9GZZ8 138 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 TMOD2Q9NZR1 351 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 A0A1W2PQC6 194 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 POTEB3A0JP26 581 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 GOLGA6CA6NDK9 693 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 POTECB2RU33 542 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 SORBS3O60504 671 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 GOLGA6DP0CG33 693 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 KCNB1Q14721 858 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 KCTD19Q17RG1 926 aaPredicted RBP5.43□□□□□ -1.54
SMAD4-202ENST00000398417 TBC1D10BQ4KMP7 808 aaPredicted RBP5.43□□□□□ -1.54
SMAD4-202ENST00000398417 POTEBQ6S5H4 581 aa5.43□□□□□ -1.54
SMAD4-202ENST00000398417 APTXQ7Z2E3 356 aaKnown RBP5.43□□□□□ -1.54
SMAD4-202ENST00000398417 ADAT2Q7Z6V5 191 aaKnown RBP5.43□□□□□ -1.54
SMAD4-202ENST00000398417 MYCT1Q8N699 235 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms