RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 NSUN6Q8TEA1 469 aaKnown RBP23.99■■□□□ 1.43
CPNE1-204ENST00000397443 ZCCHC17Q9NP64 241 aaKnown RBP23.99■■□□□ 1.43
CPNE1-204ENST00000397443 A0A1W2PQ27 194 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 A0A1W2PQ64 194 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 A0A1W2PQD8 194 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 LAD1O00515 517 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 NR1I2O75469 434 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 LCTP09848 1927 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 MOXD1Q6UVY6 613 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 CCDC73Q6ZRK6 1079 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 SHCBP1Q8NEM2 672 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 ZFYVE28Q9HCC9 887 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 CDC25AP30304 524 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 CIITAP33076 1130 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 TECP42680 631 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 NDUFA8P51970 172 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 CEP55Q53EZ4 464 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 PLA2G4DQ86XP0 818 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 HAS1Q92839 578 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 LENG9Q96B70 501 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 EPSTI1Q96J88 318 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 MTMR9Q96QG7 549 aa23.98■■□□□ 1.43
CPNE1-204ENST00000397443 NR3C2P08235 984 aa23.97■■□□□ 1.43
CPNE1-204ENST00000397443 PFKFB1P16118 471 aa23.97■■□□□ 1.43
CPNE1-204ENST00000397443 CMA1P23946 247 aa23.97■■□□□ 1.43
CPNE1-204ENST00000397443 MRPS9P82933 396 aaKnown RBP23.97■■□□□ 1.43
CPNE1-204ENST00000397443 Q4G0T1 1027 aa23.97■■□□□ 1.43
CPNE1-204ENST00000397443 RESP18Q5W5W9 173 aa23.97■■□□□ 1.43
CPNE1-204ENST00000397443 PCNX4Q63HM2 1172 aa23.97■■□□□ 1.43
CPNE1-204ENST00000397443 MBOAT7Q96N66 472 aa23.97■■□□□ 1.43
CPNE1-204ENST00000397443 PANK2Q9BZ23 570 aa23.97■■□□□ 1.43
CPNE1-204ENST00000397443 DACT1Q9NYF0 836 aa23.97■■□□□ 1.43
CPNE1-204ENST00000397443 ASTN1O14525 1302 aa23.96■■□□□ 1.43
CPNE1-204ENST00000397443 FRMPD4Q14CM0 1322 aa23.96■■□□□ 1.43
CPNE1-204ENST00000397443 ADGRA2Q96PE1 1338 aa23.96■■□□□ 1.43
CPNE1-204ENST00000397443 IGLV3-22A0A075B6J6 115 aa23.96■■□□□ 1.43
CPNE1-204ENST00000397443 TLR2O60603 784 aa23.96■■□□□ 1.43
CPNE1-204ENST00000397443 PKD2L1Q9P0L9 805 aa23.96■■□□□ 1.43
CPNE1-204ENST00000397443 PP2D1A8MPX8 630 aa23.96■■□□□ 1.43
CPNE1-204ENST00000397443 ITGB5P18084 799 aa23.96■■□□□ 1.43
CPNE1-204ENST00000397443 PRPHP41219 470 aa23.96■■□□□ 1.43
CPNE1-204ENST00000397443 SYMPKQ92797 1274 aaKnown RBP23.96■■□□□ 1.43
CPNE1-204ENST00000397443 MXRA8Q9BRK3 442 aa23.96■■□□□ 1.43
CPNE1-204ENST00000397443 WDR11Q9BZH6 1224 aa23.96■■□□□ 1.43
CPNE1-204ENST00000397443 TTC12Q9H892 705 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-204ENST00000397443 MORC2Q9Y6X9 1032 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-204ENST00000397443 IVNS1ABPQ9Y6Y0 642 aa23.96■■□□□ 1.43
CPNE1-204ENST00000397443 SOWAHBA6NEL2 793 aa23.95■■□□□ 1.42
CPNE1-204ENST00000397443 MSH4O15457 936 aa23.95■■□□□ 1.42
CPNE1-204ENST00000397443 BCRP11274 1271 aa23.95■■□□□ 1.42
CPNE1-204ENST00000397443 CCND2P30279 289 aa23.95■■□□□ 1.42
CPNE1-204ENST00000397443 ZNF579Q8NAF0 562 aaKnown RBP23.95■■□□□ 1.42
CPNE1-204ENST00000397443 KCNMB3Q9NPA1 279 aa23.95■■□□□ 1.42
CPNE1-204ENST00000397443 ZNFX1Q9P2E3 1918 aaKnown RBP23.95■■□□□ 1.42
CPNE1-204ENST00000397443 ARP10275 920 aa23.94■■□□□ 1.42
CPNE1-204ENST00000397443 GPR142Q7Z601 462 aa23.94■■□□□ 1.42
CPNE1-204ENST00000397443 PDILTQ8N807 584 aa23.94■■□□□ 1.42
CPNE1-204ENST00000397443 ETNPPLQ8TBG4 499 aa23.94■■□□□ 1.42
CPNE1-204ENST00000397443 FAM13BQ9NYF5 915 aa23.94■■□□□ 1.42
CPNE1-204ENST00000397443 TMEM63CQ9P1W3 806 aa23.94■■□□□ 1.42
CPNE1-204ENST00000397443 POTEMA6NI47 508 aa23.94■■□□□ 1.42
CPNE1-204ENST00000397443 LONP1P36776 959 aaKnown RBP23.94■■□□□ 1.42
CPNE1-204ENST00000397443 VEGFBP49765 207 aa23.94■■□□□ 1.42
CPNE1-204ENST00000397443 ALDH5A1P51649 535 aaPredicted RBP23.94■■□□□ 1.42
CPNE1-204ENST00000397443 ZRSR1Q15695 479 aaKnown RBP23.94■■□□□ 1.42
CPNE1-204ENST00000397443 TMEM266Q2M3C6 531 aa23.94■■□□□ 1.42
CPNE1-204ENST00000397443 C17orf99Q6UX52 265 aa23.94■■□□□ 1.42
CPNE1-204ENST00000397443 FAM133AQ8N9E0 248 aa23.94■■□□□ 1.42
CPNE1-204ENST00000397443 DNERQ8NFT8 737 aa23.94■■□□□ 1.42
CPNE1-204ENST00000397443 PLXNB2O15031 1838 aa23.93■■□□□ 1.42
CPNE1-204ENST00000397443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.93■■□□□ 1.42
CPNE1-204ENST00000397443 MEIS1O00470 390 aa23.93■■□□□ 1.42
CPNE1-204ENST00000397443 ADORA2AP29274 412 aa23.93■■□□□ 1.42
CPNE1-204ENST00000397443 FAM160A1Q05DH4 1040 aa23.93■■□□□ 1.42
CPNE1-204ENST00000397443 SNW1Q13573 536 aaKnown RBP23.93■■□□□ 1.42
CPNE1-204ENST00000397443 VSIG10LQ86VR7 867 aa23.93■■□□□ 1.42
CPNE1-204ENST00000397443 MAF1Q9H063 256 aa23.93■■□□□ 1.42
CPNE1-204ENST00000397443 ADD3Q9UEY8 706 aaKnown RBP23.93■■□□□ 1.42
CPNE1-204ENST00000397443 PCDHA12Q9UN75 941 aa23.93■■□□□ 1.42
CPNE1-204ENST00000397443 CA12O43570 354 aa23.92■■□□□ 1.42
CPNE1-204ENST00000397443 CAMK4Q16566 473 aa23.92■■□□□ 1.42
CPNE1-204ENST00000397443 KCNH3Q9ULD8 1083 aa23.92■■□□□ 1.42
CPNE1-204ENST00000397443 UBIAD1Q9Y5Z9 338 aa23.92■■□□□ 1.42
CPNE1-204ENST00000397443 MAPK4P31152 587 aa23.92■■□□□ 1.42
CPNE1-204ENST00000397443 SYKP43405 635 aa23.92■■□□□ 1.42
CPNE1-204ENST00000397443 MTMR1Q13613 665 aa23.92■■□□□ 1.42
CPNE1-204ENST00000397443 PLEKHH3Q7Z736 793 aa23.92■■□□□ 1.42
CPNE1-204ENST00000397443 SLFN12Q8IYM2 578 aa23.92■■□□□ 1.42
CPNE1-204ENST00000397443 ENGASEQ8NFI3 743 aa23.92■■□□□ 1.42
CPNE1-204ENST00000397443 ZNF577Q9BSK1 485 aa23.92■■□□□ 1.42
CPNE1-204ENST00000397443 KCNH7Q9NS40 1196 aa23.92■■□□□ 1.42
CPNE1-204ENST00000397443 DNAJC25-GNG10A0A024R161 153 aa23.91■■□□□ 1.42
CPNE1-204ENST00000397443 SETQ01105 290 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-204ENST00000397443 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.91■■□□□ 1.423e-8■□□□□ 9.3
CPNE1-204ENST00000397443 FMR1NBQ8N0W7 255 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-204ENST00000397443 KINO60870 393 aaKnown RBP23.9■■□□□ 1.42
CPNE1-204ENST00000397443 PDE4DQ08499 809 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 EEPD1Q7L9B9 569 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 RASSF8Q8NHQ8 419 aa23.9■■□□□ 1.42
CPNE1-204ENST00000397443 FGD4Q96M96 766 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms