RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 USP17L6PQ6QN14 398 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 DDX12PQ92771 950 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 LZTFL1Q9NQ48 299 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 ZNF219Q9P2Y4 722 aaPredicted RBP18.73■□□□□ 0.59
NUP50-202ENST00000396096 MYO1AQ9UBC5 1043 aa18.73■□□□□ 0.59
NUP50-202ENST00000396096 DDX41Q9UJV9 622 aaKnown RBP18.73■□□□□ 0.59
NUP50-202ENST00000396096 YDJCA8MPS7 323 aa18.72■□□□□ 0.59
NUP50-202ENST00000396096 FGFR1OPO95684 399 aaKnown RBP18.72■□□□□ 0.59
NUP50-202ENST00000396096 NDUFB10O96000 172 aa18.72■□□□□ 0.59
NUP50-202ENST00000396096 TUBB2AQ13885 445 aa18.72■□□□□ 0.59
NUP50-202ENST00000396096 ACRBPQ8NEB7 543 aa18.72■□□□□ 0.59
NUP50-202ENST00000396096 UBXN4Q92575 508 aa18.72■□□□□ 0.59
NUP50-202ENST00000396096 HPS3Q969F9 1004 aa18.72■□□□□ 0.59
NUP50-202ENST00000396096 DNAJC19Q96DA6 116 aa18.72■□□□□ 0.59
NUP50-202ENST00000396096 TUBB2BQ9BVA1 445 aa18.72■□□□□ 0.59
NUP50-202ENST00000396096 OGFRQ9NZT2 677 aa18.72■□□□□ 0.59
NUP50-202ENST00000396096 A0A0U1RQJ8 604 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 A0A1W2PQJ5 194 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 MARCH6O60337 910 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 GDF11O95390 407 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 RXRBP28702 533 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 ARHGAP25P42331 645 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 MTIF2P46199 727 aaKnown RBP18.71■□□□□ 0.59
NUP50-202ENST00000396096 TBC1D8BQ0IIM8 1120 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 RBM26Q5T8P6 1007 aaKnown RBP18.71■□□□□ 0.59
NUP50-202ENST00000396096 SYDE2Q5VT97 1194 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 DYMQ7RTS9 669 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 TEX2Q8IWB9 1127 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 SLFN12Q8IYM2 578 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 ATRIPQ8WXE1 791 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 PRMT6Q96LA8 375 aaPredicted RBP18.71■□□□□ 0.59
NUP50-202ENST00000396096 ARID3AQ99856 593 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 HERC5Q9UII4 1024 aaKnown RBP18.71■□□□□ 0.59
NUP50-202ENST00000396096 EPN1Q9Y6I3 576 aaPredicted RBP18.71■□□□□ 0.59
NUP50-202ENST00000396096 RASSF10A6NK89 507 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 TBX3O15119 743 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 NDUFA10O95299 355 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 FOSP01100 380 aaPredicted RBP18.71■□□□□ 0.59
NUP50-202ENST00000396096 ARHGAP29Q52LW3 1261 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 FBXO11Q86XK2 927 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 CHP1Q99653 195 aa18.71■□□□□ 0.59
NUP50-202ENST00000396096 NOC4LQ9BVI4 516 aaKnown RBP18.71■□□□□ 0.59
NUP50-202ENST00000396096 IRX2Q9BZI1 471 aaPredicted RBP18.71■□□□□ 0.59
NUP50-202ENST00000396096 PES1O00541 588 aaKnown RBP18.7■□□□□ 0.58
NUP50-202ENST00000396096 PPIP5K2O43314 1243 aa18.7■□□□□ 0.58
NUP50-202ENST00000396096 RAD21O60216 631 aa18.7■□□□□ 0.58
NUP50-202ENST00000396096 BMP3P12645 472 aa18.7■□□□□ 0.58
NUP50-202ENST00000396096 JAG1P78504 1218 aa18.7■□□□□ 0.58
NUP50-202ENST00000396096 ZBED6P86452 979 aa18.7■□□□□ 0.58
NUP50-202ENST00000396096 PPP2R3AQ06190 1150 aa18.7■□□□□ 0.58
NUP50-202ENST00000396096 TSR1Q2NL82 804 aaKnown RBP18.7■□□□□ 0.58
NUP50-202ENST00000396096 Q4G0T1 1027 aa18.7■□□□□ 0.58
NUP50-202ENST00000396096 WDR59Q6PJI9 974 aa18.7■□□□□ 0.58
NUP50-202ENST00000396096 ZNF662Q6ZS27 426 aa18.7■□□□□ 0.58
NUP50-202ENST00000396096 GH2P01242 217 aa18.69■□□□□ 0.58
NUP50-202ENST00000396096 ARHGAP4P98171 946 aa18.69■□□□□ 0.58
NUP50-202ENST00000396096 CDK17Q00537 523 aa18.69■□□□□ 0.58
NUP50-202ENST00000396096 FKBP15Q5T1M5 1219 aa18.69■□□□□ 0.58
NUP50-202ENST00000396096 RSRC2Q7L4I2 434 aaKnown RBP18.69■□□□□ 0.58
NUP50-202ENST00000396096 REXO2Q9Y3B8 237 aaKnown RBP18.69■□□□□ 0.58
NUP50-202ENST00000396096 IDEP14735 1019 aa18.69■□□□□ 0.58
NUP50-202ENST00000396096 SREBF1P36956 1147 aa18.69■□□□□ 0.58
NUP50-202ENST00000396096 COASYQ13057 564 aa18.69■□□□□ 0.58
NUP50-202ENST00000396096 RRP1BQ14684 758 aaKnown RBP18.69■□□□□ 0.58
NUP50-202ENST00000396096 ZNF569Q5MCW4 686 aa18.69■□□□□ 0.58
NUP50-202ENST00000396096 LRRC55Q6ZSA7 311 aa18.69■□□□□ 0.58
NUP50-202ENST00000396096 ETNPPLQ8TBG4 499 aa18.69■□□□□ 0.58
NUP50-202ENST00000396096 CSRNP1Q96S65 589 aa18.69■□□□□ 0.58
NUP50-202ENST00000396096 P2RX7Q99572 595 aaKnown RBP18.69■□□□□ 0.58
NUP50-202ENST00000396096 SLF1Q9BQI6 1058 aa18.69■□□□□ 0.58
NUP50-202ENST00000396096 BMP2KQ9NSY1 1161 aaPredicted RBP18.69■□□□□ 0.58
NUP50-202ENST00000396096 STK32BQ9NY57 414 aa18.69■□□□□ 0.58
NUP50-202ENST00000396096 FAM53CQ9NYF3 392 aa18.69■□□□□ 0.58
NUP50-202ENST00000396096 TRIM21P19474 475 aaKnown RBP18.68■□□□□ 0.58
NUP50-202ENST00000396096 CIITAP33076 1130 aa18.68■□□□□ 0.58
NUP50-202ENST00000396096 MAN2A1Q16706 1144 aa18.68■□□□□ 0.58
NUP50-202ENST00000396096 VWA3BQ502W6 1294 aa18.68■□□□□ 0.58
NUP50-202ENST00000396096 ZCWPW2Q504Y3 356 aa18.68■□□□□ 0.58
NUP50-202ENST00000396096 GJA10Q969M2 543 aa18.68■□□□□ 0.58
NUP50-202ENST00000396096 STK24Q9Y6E0 443 aa18.68■□□□□ 0.58
NUP50-202ENST00000396096 KIF13BQ9NQT8 1826 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 SPDYE2BA6NHP3 402 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 SPDYE6P0CI01 402 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 SPIRE1Q08AE8 756 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 RSBN1LQ6PCB5 846 aaPredicted RBP18.67■□□□□ 0.58
NUP50-202ENST00000396096 MYOCDQ8IZQ8 938 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 FBXO41Q8TF61 875 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 CAMKK2Q96RR4 588 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 TSG101Q99816 390 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 PANK4Q9NVE7 773 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 TMOD2Q9NZR1 351 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 CDC23Q9UJX2 597 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 A0A1W2PRG0 241 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 CTAGE9A4FU28 777 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 PIK3CDO00329 1044 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 PLA2G4BP0C869 781 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 HNRNPH3P31942 346 aaKnown RBP18.67■□□□□ 0.58
NUP50-202ENST00000396096 TRAF1Q13077 416 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 FAM26FQ5R3K3 315 aa18.67■□□□□ 0.58
NUP50-202ENST00000396096 HAUS3Q68CZ6 603 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms