RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 LY6KQ17RY6 165 aa20.16■□□□□ 0.82
UPK3A-202ENST00000396082 TDHQ8IZJ6 230 aa20.16■□□□□ 0.82
UPK3A-202ENST00000396082 TRIM43Q96BQ3 446 aaPredicted RBP20.16■□□□□ 0.82
UPK3A-202ENST00000396082 CNTNAP5Q8WYK1 1306 aa20.16■□□□□ 0.82
UPK3A-202ENST00000396082 CDK7P50613 346 aa20.15■□□□□ 0.82
UPK3A-202ENST00000396082 RCAN1P53805 252 aa20.15■□□□□ 0.82
UPK3A-202ENST00000396082 PSMC6P62333 389 aa20.15■□□□□ 0.82
UPK3A-202ENST00000396082 FAAP100Q0VG06 881 aa20.15■□□□□ 0.82
UPK3A-202ENST00000396082 CCDC62Q6P9F0 684 aa20.15■□□□□ 0.82
UPK3A-202ENST00000396082 USP17L6PQ6QN14 398 aa20.15■□□□□ 0.82
UPK3A-202ENST00000396082 IL31RAQ8NI17 732 aa20.15■□□□□ 0.82
UPK3A-202ENST00000396082 GPKOWQ92917 476 aaPredicted RBP eCLIP20.15■□□□□ 0.82
UPK3A-202ENST00000396082 BADQ92934 168 aa20.15■□□□□ 0.82
UPK3A-202ENST00000396082 MTG1Q9BT17 334 aaPredicted RBP20.15■□□□□ 0.82
UPK3A-202ENST00000396082 USP26Q9BXU7 913 aa20.15■□□□□ 0.82
UPK3A-202ENST00000396082 PSTPIP2Q9H939 334 aa20.15■□□□□ 0.82
UPK3A-202ENST00000396082 CCDC196A0A1B0GTZ2 297 aa20.14■□□□□ 0.81
UPK3A-202ENST00000396082 KIAA0355O15063 1070 aa20.14■□□□□ 0.81
UPK3A-202ENST00000396082 KPNA6O60684 536 aa20.14■□□□□ 0.81
UPK3A-202ENST00000396082 PURAQ00577 322 aaKnown RBP20.14■□□□□ 0.81
UPK3A-202ENST00000396082 VSIG10LQ86VR7 867 aa20.14■□□□□ 0.81
UPK3A-202ENST00000396082 FAM126BQ8IXS8 530 aa20.14■□□□□ 0.81
UPK3A-202ENST00000396082 SEZ6LQ9BYH1 1024 aa20.14■□□□□ 0.81
UPK3A-202ENST00000396082 A6NJR5 290 aa20.13■□□□□ 0.81
UPK3A-202ENST00000396082 PIK3CDO00329 1044 aa20.13■□□□□ 0.81
UPK3A-202ENST00000396082 GNPTABQ3T906 1256 aa20.13■□□□□ 0.81
UPK3A-202ENST00000396082 KCNV1Q6PIU1 500 aa20.13■□□□□ 0.81
UPK3A-202ENST00000396082 AFG1LQ8WV93 481 aa20.13■□□□□ 0.81
UPK3A-202ENST00000396082 ZFP91Q96JP5 570 aaPredicted RBP20.13■□□□□ 0.81
UPK3A-202ENST00000396082 DDX41Q9UJV9 622 aaKnown RBP20.13■□□□□ 0.81
UPK3A-202ENST00000396082 CYP46A1Q9Y6A2 500 aa20.13■□□□□ 0.81
UPK3A-202ENST00000396082 MEIS2O14770 477 aa20.12■□□□□ 0.81
UPK3A-202ENST00000396082 CDC27P30260 824 aa20.12■□□□□ 0.81
UPK3A-202ENST00000396082 NAPAP54920 295 aa20.12■□□□□ 0.81
UPK3A-202ENST00000396082 CHMP4BP1P59074 171 aa20.12■□□□□ 0.81
UPK3A-202ENST00000396082 ARHGAP1Q07960 439 aa20.12■□□□□ 0.81
UPK3A-202ENST00000396082 FAM47CQ5HY64 1035 aa20.12■□□□□ 0.81
UPK3A-202ENST00000396082 WWC2Q6AWC2 1192 aa20.12■□□□□ 0.81
UPK3A-202ENST00000396082 RUFY3Q7L099 469 aa20.12■□□□□ 0.81
UPK3A-202ENST00000396082 DHX37Q8IY37 1157 aaKnown RBP20.12■□□□□ 0.81
UPK3A-202ENST00000396082 TBX21Q9UL17 535 aa20.12■□□□□ 0.81
UPK3A-202ENST00000396082 V9GY48 417 aaPredicted RBP20.12■□□□□ 0.81
UPK3A-202ENST00000396082 MYH7BA7E2Y1 1941 aa20.12■□□□□ 0.81
UPK3A-202ENST00000396082 FRMPD4Q14CM0 1322 aa20.11■□□□□ 0.81
UPK3A-202ENST00000396082 SPDYE3A6NKU9 549 aa20.11■□□□□ 0.81
UPK3A-202ENST00000396082 STAM2O75886 525 aa20.11■□□□□ 0.81
UPK3A-202ENST00000396082 SLC34A2O95436 690 aa20.11■□□□□ 0.81
UPK3A-202ENST00000396082 MMP3P08254 477 aa20.11■□□□□ 0.81
UPK3A-202ENST00000396082 LAMC2Q13753 1193 aa20.11■□□□□ 0.81
UPK3A-202ENST00000396082 SLC43A3Q8NBI5 491 aa20.11■□□□□ 0.81
UPK3A-202ENST00000396082 DNAH12Q6ZR08 3092 aa20.11■□□□□ 0.81
UPK3A-202ENST00000396082 GRIN2DO15399 1336 aa20.1■□□□□ 0.81
UPK3A-202ENST00000396082 hCG_1984214I3L0E3 225 aa20.1■□□□□ 0.81
UPK3A-202ENST00000396082 SORBS3O60504 671 aa20.1■□□□□ 0.81
UPK3A-202ENST00000396082 RGS20O76081 388 aa20.1■□□□□ 0.81
UPK3A-202ENST00000396082 ITGB8P26012 769 aa20.1■□□□□ 0.81
UPK3A-202ENST00000396082 ADD1P35611 737 aaKnown RBP20.1■□□□□ 0.81
UPK3A-202ENST00000396082 FUT2Q10981 343 aa20.1■□□□□ 0.81
UPK3A-202ENST00000396082 UBE2SQ16763 222 aa20.1■□□□□ 0.81
UPK3A-202ENST00000396082 PPP1R18Q6NYC8 613 aa20.1■□□□□ 0.81
UPK3A-202ENST00000396082 FBXL16Q8N461 479 aa20.1■□□□□ 0.81
UPK3A-202ENST00000396082 ZNF713Q8N859 430 aaPredicted RBP20.1■□□□□ 0.81
UPK3A-202ENST00000396082 UPF3BQ9BZI7 483 aaKnown RBP20.1■□□□□ 0.81
UPK3A-202ENST00000396082 PPP1R12CQ9BZL4 782 aa20.1■□□□□ 0.81
UPK3A-202ENST00000396082 EHMT1Q9H9B1 1298 aa20.1■□□□□ 0.81
UPK3A-202ENST00000396082 ZSWIM6Q9HCJ5 1215 aa20.1■□□□□ 0.81
UPK3A-202ENST00000396082 FAM217BQ9NTX9 383 aaPredicted RBP20.1■□□□□ 0.81
UPK3A-202ENST00000396082 RTEL1Q9NZ71 1219 aa20.1■□□□□ 0.81
UPK3A-202ENST00000396082 SCN10AQ9Y5Y9 1956 aa20.09■□□□□ 0.81
UPK3A-202ENST00000396082 GGPS1O95749 300 aa20.09■□□□□ 0.81
UPK3A-202ENST00000396082 TIMP1P01033 207 aa20.09■□□□□ 0.81
UPK3A-202ENST00000396082 TGFB3P10600 412 aa20.09■□□□□ 0.81
UPK3A-202ENST00000396082 UBA1P22314 1058 aaKnown RBP20.09■□□□□ 0.81
UPK3A-202ENST00000396082 AKAP17AQ02040 695 aaKnown RBP20.09■□□□□ 0.81
UPK3A-202ENST00000396082 FPGSQ05932 587 aa20.09■□□□□ 0.81
UPK3A-202ENST00000396082 DGKDQ16760 1214 aa20.09■□□□□ 0.81
UPK3A-202ENST00000396082 PCNX4Q63HM2 1172 aa20.09■□□□□ 0.81
UPK3A-202ENST00000396082 EMID1Q96A84 441 aaPredicted RBP20.09■□□□□ 0.81
UPK3A-202ENST00000396082 AGXT2Q9BYV1 514 aa20.09■□□□□ 0.81
UPK3A-202ENST00000396082 B4GALT4O60513 344 aa20.08■□□□□ 0.81
UPK3A-202ENST00000396082 EIF5BO60841 1220 aaKnown RBP20.08■□□□□ 0.81
UPK3A-202ENST00000396082 CD4P01730 458 aa20.08■□□□□ 0.81
UPK3A-202ENST00000396082 ADCY7P51828 1080 aa20.08■□□□□ 0.81
UPK3A-202ENST00000396082 MRPS9P82933 396 aaKnown RBP20.08■□□□□ 0.81
UPK3A-202ENST00000396082 NBPF20Q3BBV1 942 aa20.08■□□□□ 0.81
UPK3A-202ENST00000396082 XRRA1Q6P2D8 792 aa20.08■□□□□ 0.81
UPK3A-202ENST00000396082 NLRX1Q86UT6 975 aa20.08■□□□□ 0.81
UPK3A-202ENST00000396082 SPATA33Q96N06 139 aa20.08■□□□□ 0.81
UPK3A-202ENST00000396082 TM6SF1Q9BZW5 370 aa20.08■□□□□ 0.81
UPK3A-202ENST00000396082 TRPV6Q9H1D0 765 aa20.08■□□□□ 0.81
UPK3A-202ENST00000396082 ALDH8A1Q9H2A2 487 aaPredicted RBP20.08■□□□□ 0.81
UPK3A-202ENST00000396082 MLXIPQ9HAP2 919 aa20.08■□□□□ 0.81
UPK3A-202ENST00000396082 NID2Q14112 1375 aa20.08■□□□□ 0.8
UPK3A-202ENST00000396082 STXBP3O00186 592 aa20.07■□□□□ 0.8
UPK3A-202ENST00000396082 FIBPO43427 364 aa20.07■□□□□ 0.8
UPK3A-202ENST00000396082 SUPT20HL2P0C7V6 817 aa20.07■□□□□ 0.8
UPK3A-202ENST00000396082 CCT2P78371 535 aaKnown RBP20.07■□□□□ 0.8
UPK3A-202ENST00000396082 CELF3Q5SZQ8 465 aaKnown RBP20.07■□□□□ 0.8
UPK3A-202ENST00000396082 MYSM1Q5VVJ2 828 aa20.07■□□□□ 0.8
UPK3A-202ENST00000396082 NFRKBQ6P4R8 1299 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms