RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 NONOQ15233 471 aaKnown RBP eCLIP18.5■□□□□ 0.55
SIPA1-201ENST00000394224 DDX12PQ92771 950 aa18.5■□□□□ 0.55
SIPA1-201ENST00000394224 E9PMD0 336 aa18.5■□□□□ 0.55
SIPA1-201ENST00000394224 DDAH1O94760 285 aa18.5■□□□□ 0.55
SIPA1-201ENST00000394224 STAT3P40763 770 aa18.5■□□□□ 0.55
SIPA1-201ENST00000394224 E2F5Q15329 346 aa18.5■□□□□ 0.55
SIPA1-201ENST00000394224 CALCRLQ16602 461 aa18.5■□□□□ 0.55
SIPA1-201ENST00000394224 HERC4Q5GLZ8 1057 aaPredicted RBP18.5■□□□□ 0.55
SIPA1-201ENST00000394224 HAUS3Q68CZ6 603 aa18.5■□□□□ 0.55
SIPA1-201ENST00000394224 PAXIP1Q6ZW49 1069 aaPredicted RBP18.5■□□□□ 0.55
SIPA1-201ENST00000394224 INTS5Q6P9B9 1019 aaKnown RBP18.49■□□□□ 0.55
SIPA1-201ENST00000394224 NOX5Q96PH1 765 aa18.49■□□□□ 0.55
SIPA1-201ENST00000394224 BAZ2AQ9UIF9 1905 aaKnown RBP18.49■□□□□ 0.55
SIPA1-201ENST00000394224 EP400Q96L91 3159 aa18.49■□□□□ 0.55
SIPA1-201ENST00000394224 RPS8P62241 208 aaKnown RBP18.49■□□□□ 0.55
SIPA1-201ENST00000394224 AMOTL1Q8IY63 956 aa18.49■□□□□ 0.55
SIPA1-201ENST00000394224 RDH13Q8NBN7 331 aa18.49■□□□□ 0.55
SIPA1-201ENST00000394224 SPAG5Q96R06 1193 aa18.49■□□□□ 0.55
SIPA1-201ENST00000394224 THAP9Q9H5L6 903 aa18.49■□□□□ 0.55
SIPA1-201ENST00000394224 SH2D4AQ9H788 454 aa18.49■□□□□ 0.55
SIPA1-201ENST00000394224 CYP4A11Q02928 519 aa18.49■□□□□ 0.55
SIPA1-201ENST00000394224 ADCY1Q08828 1119 aa18.49■□□□□ 0.55
SIPA1-201ENST00000394224 IKQ13123 557 aaPredicted RBP18.49■□□□□ 0.55
SIPA1-201ENST00000394224 GJB7Q6PEY0 223 aa18.49■□□□□ 0.55
SIPA1-201ENST00000394224 BICDL2A1A5D9 508 aa18.48■□□□□ 0.55
SIPA1-201ENST00000394224 LDHBP07195 334 aaKnown RBP18.48■□□□□ 0.55
SIPA1-201ENST00000394224 MCM3P25205 808 aa18.48■□□□□ 0.55
SIPA1-201ENST00000394224 HDLBPQ00341 1268 aaKnown RBP18.48■□□□□ 0.55
SIPA1-201ENST00000394224 TAX1BP1Q86VP1 789 aa18.48■□□□□ 0.55
SIPA1-201ENST00000394224 MAD2L2Q9UI95 211 aa18.48■□□□□ 0.55
SIPA1-201ENST00000394224 RIMBP2O15034 1052 aa18.48■□□□□ 0.55
SIPA1-201ENST00000394224 DHX9Q08211 1270 aaKnown RBP18.48■□□□□ 0.55
SIPA1-201ENST00000394224 KLHL30Q0D2K2 578 aa18.48■□□□□ 0.55
SIPA1-201ENST00000394224 TBC1D9BQ66K14 1250 aa18.48■□□□□ 0.55
SIPA1-201ENST00000394224 TLR10Q9BXR5 811 aa18.48■□□□□ 0.55
SIPA1-201ENST00000394224 CELF4Q9BZC1 486 aaKnown RBP18.48■□□□□ 0.55
SIPA1-201ENST00000394224 TMEM110-MUSTN1A8MSY1 372 aa18.48■□□□□ 0.55
SIPA1-201ENST00000394224 RHOBTB3O94955 611 aa18.48■□□□□ 0.55
SIPA1-201ENST00000394224 NTSR2O95665 410 aa18.48■□□□□ 0.55
SIPA1-201ENST00000394224 PPFIA1Q13136 1202 aa18.48■□□□□ 0.55
SIPA1-201ENST00000394224 NKX1-1Q15270 411 aaPredicted RBP18.48■□□□□ 0.55
SIPA1-201ENST00000394224 EYA3Q99504 573 aa18.48■□□□□ 0.55
SIPA1-201ENST00000394224 ZNF335Q9H4Z2 1342 aaPredicted RBP18.48■□□□□ 0.55
SIPA1-201ENST00000394224 A0A087X0T9 212 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 CAMTA2O94983 1202 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 FAM228BP0C875 321 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 TUBB2AQ13885 445 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 DDB1Q16531 1140 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 NEK8Q86SG6 692 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 REXO1Q8N1G1 1221 aaKnown RBP18.47■□□□□ 0.55
SIPA1-201ENST00000394224 TAF4BQ92750 862 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 TUBB2BQ9BVA1 445 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 BMP2KQ9NSY1 1161 aaPredicted RBP18.47■□□□□ 0.55
SIPA1-201ENST00000394224 CLIC2O15247 247 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 NFIXQ14938 502 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 KCTD1Q719H9 257 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 MAEAQ7L5Y9 396 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 PLAAQ9Y263 795 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 CLSTN1O94985 981 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 TTBK2Q6IQ55 1244 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 KBTBD4Q9NVX7 518 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 KIAA1024Q9UPX6 916 aa18.47■□□□□ 0.55
SIPA1-201ENST00000394224 GOLGA6L10A6NI86 522 aa18.46■□□□□ 0.55
SIPA1-201ENST00000394224 STXBP3O00186 592 aa18.46■□□□□ 0.55
SIPA1-201ENST00000394224 OPA1O60313 960 aa18.46■□□□□ 0.55
SIPA1-201ENST00000394224 CFAP221Q4G0U5 840 aa18.46■□□□□ 0.55
SIPA1-201ENST00000394224 TMED8Q6PL24 325 aaPredicted RBP18.46■□□□□ 0.55
SIPA1-201ENST00000394224 MDM1Q8TC05 714 aa18.46■□□□□ 0.55
SIPA1-201ENST00000394224 LARP4BQ92615 738 aaKnown RBP18.46■□□□□ 0.55
SIPA1-201ENST00000394224 EIF3HO15372 352 aaKnown RBP eCLIP18.46■□□□□ 0.55
SIPA1-201ENST00000394224 HNRNPH1P31943 449 aaKnown RBP18.46■□□□□ 0.55
SIPA1-201ENST00000394224 CNNM4Q6P4Q7 775 aa18.46■□□□□ 0.55
SIPA1-201ENST00000394224 FAM114A1Q8IWE2 563 aa18.46■□□□□ 0.55
SIPA1-201ENST00000394224 CEP95Q96GE4 821 aa18.46■□□□□ 0.55
SIPA1-201ENST00000394224 USP17L15C9J2P7 530 aa18.46■□□□□ 0.54
SIPA1-201ENST00000394224 USP17L13C9JLJ4 530 aa18.46■□□□□ 0.54
SIPA1-201ENST00000394224 USP17L11C9JVI0 530 aa18.46■□□□□ 0.54
SIPA1-201ENST00000394224 USP17L18D6R9N7 530 aa18.46■□□□□ 0.54
SIPA1-201ENST00000394224 USP17L22D6RA61 530 aa18.46■□□□□ 0.54
SIPA1-201ENST00000394224 USP17L17D6RBQ6 530 aa18.46■□□□□ 0.54
SIPA1-201ENST00000394224 USP17L19D6RCP7 530 aa18.46■□□□□ 0.54
SIPA1-201ENST00000394224 USP17L20D6RJB6 530 aa18.46■□□□□ 0.54
SIPA1-201ENST00000394224 RAD51CO43502 376 aa18.46■□□□□ 0.54
SIPA1-201ENST00000394224 SLCO1A2P46721 670 aa18.46■□□□□ 0.54
SIPA1-201ENST00000394224 USP17L24Q0WX57 530 aa18.46■□□□□ 0.54
SIPA1-201ENST00000394224 USP17L6PQ6QN14 398 aa18.46■□□□□ 0.54
SIPA1-201ENST00000394224 ELOA2Q8IYF1 753 aaPredicted RBP18.46■□□□□ 0.54
SIPA1-201ENST00000394224 FAM212AQ96EL1 285 aa18.46■□□□□ 0.54
SIPA1-201ENST00000394224 NLRP3Q96P20 1036 aa18.46■□□□□ 0.54
SIPA1-201ENST00000394224 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.46■□□□□ 0.54
SIPA1-201ENST00000394224 SLIT3O75094 1523 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 ZC3H4Q9UPT8 1303 aaKnown RBP18.45■□□□□ 0.54
SIPA1-201ENST00000394224 EFCAB13Q8IY85 973 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 ELMO3Q96BJ8 720 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 BRIP1Q9BX63 1249 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 C6orf50Q9HD87 102 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 AMACRQ9UHK6 382 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 PCDHB13Q9Y5F0 798 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 SCN11AQ9UI33 1791 aa18.45■□□□□ 0.54
SIPA1-201ENST00000394224 A0A087WUV0 522 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms