RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 VIMP08670 466 aaKnown RBP6.1□□□□□ -1.43
GEN1-202ENST00000381254 C6orf222P0C671 652 aaPredicted RBP6.1□□□□□ -1.43
GEN1-202ENST00000381254 BPIFB4P59827 614 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 SPP2Q13103 211 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 SEL1L2Q5TEA6 688 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 LIN9Q5TKA1 542 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 ZC3H14Q6PJT7 736 aaKnown RBP6.1□□□□□ -1.43
GEN1-202ENST00000381254 CCDC170Q8IYT3 715 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 FAM71BQ8TC56 605 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 FAM151AQ8WW52 585 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 FOXP1Q9H334 677 aaPredicted RBP6.1□□□□□ -1.43
GEN1-202ENST00000381254 MRGBPQ9NV56 204 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 SLC8A1P32418 973 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 BTDP43251 543 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 PAK1Q13153 545 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 PSMD2Q13200 908 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 CAMK4Q16566 473 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 TAX1BP1Q86VP1 789 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 FBF1Q8TES7 1133 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 DHTKD1Q96HY7 919 aaPredicted RBP6.1□□□□□ -1.43
GEN1-202ENST00000381254 KATNAL1Q9BW62 490 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 SLC4A4Q9Y6R1 1079 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 SMARCA5O60264 1052 aaPredicted RBP6.1□□□□□ -1.43
GEN1-202ENST00000381254 NEBLO76041 1014 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 TSPY3P0CV98 308 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 TSPY8P0CW00 308 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 LMAN1P49257 510 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 FANCCQ00597 558 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 ZNF579Q8NAF0 562 aaKnown RBP6.1□□□□□ -1.43
GEN1-202ENST00000381254 AFAP1L1Q8TED9 768 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 GRK7Q8WTQ7 553 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 DNAJC25Q9H1X3 360 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 VCX3BQ9H321 246 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 ZHX3Q9H4I2 956 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 PFDN4Q9NQP4 134 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 STK17AQ9UEE5 414 aa6.1□□□□□ -1.43
GEN1-202ENST00000381254 STK36Q9NRP7 1315 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 KNDC1Q76NI1 1749 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 SPDYE3A6NKU9 549 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 CTNNA2P26232 953 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 PPP4R3CPQ6ZMV5 832 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 RPAINQ86UA6 219 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 TRIM42Q8IWZ5 723 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 SHCBP1Q8NEM2 672 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 FAM96AQ9H5X1 160 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 DPP7Q9UHL4 492 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 KPNA6O60684 536 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 EPB41P11171 864 aaKnown RBP6.09□□□□□ -1.43
GEN1-202ENST00000381254 RLBP1P12271 317 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 MAPK8IP2Q13387 824 aaPredicted RBP6.09□□□□□ -1.43
GEN1-202ENST00000381254 SPATA1Q5VX52 437 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 CACNA2D3Q8IZS8 1091 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 C7orf31Q8N865 590 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 COLQQ9Y215 455 aaPredicted RBP6.09□□□□□ -1.43
GEN1-202ENST00000381254 RWDD3Q9Y3V2 267 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 MYO5BQ9ULV0 1848 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 TMCO5BA8MYB1 307 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 PPM1FP49593 454 aaPredicted RBP6.09□□□□□ -1.43
GEN1-202ENST00000381254 SMTNP53814 917 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 RTP1P59025 263 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 RBM10P98175 930 aaKnown RBP6.09□□□□□ -1.43
GEN1-202ENST00000381254 SLC10A5Q5PT55 438 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 LMNTD2Q8IXW0 634 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 CPXCR1Q8N123 301 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 TYW1Q9NV66 732 aaKnown RBP6.09□□□□□ -1.43
GEN1-202ENST00000381254 TFIP11Q9UBB9 837 aaKnown RBP6.09□□□□□ -1.43
GEN1-202ENST00000381254 PIK3C2AO00443 1686 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 NBPF26B4DH59 902 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 ITGBL1O95965 494 aaPredicted RBP6.09□□□□□ -1.43
GEN1-202ENST00000381254 NAPAP54920 295 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 EIF3BP55884 814 aaKnown RBP6.09□□□□□ -1.43
GEN1-202ENST00000381254 TBC1D8BQ0IIM8 1120 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 GBP7Q8N8V2 638 aaPredicted RBP6.09□□□□□ -1.43
GEN1-202ENST00000381254 IGSF22Q8N9C0 903 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 FBXO18Q8NFZ0 1043 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 ENOX1Q8TC92 643 aaKnown RBP6.09□□□□□ -1.43
GEN1-202ENST00000381254 YME1L1Q96TA2 773 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 HOMER2Q9NSB8 354 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.09□□□□□ -1.43
GEN1-202ENST00000381254 LARSQ9P2J5 1176 aaKnown RBP6.09□□□□□ -1.43
GEN1-202ENST00000381254 NCDNQ9UBB6 729 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 HERC5Q9UII4 1024 aaKnown RBP6.09□□□□□ -1.43
GEN1-202ENST00000381254 COG5Q9UP83 839 aa6.09□□□□□ -1.43
GEN1-202ENST00000381254 CCDC169A6NNP5 214 aa6.09□□□□□ -1.44
GEN1-202ENST00000381254 SLC39A14Q15043 492 aa6.09□□□□□ -1.44
GEN1-202ENST00000381254 TSNAXIP1Q2TAA8 658 aa6.09□□□□□ -1.44
GEN1-202ENST00000381254 KLHL10Q6JEL2 608 aa6.09□□□□□ -1.44
GEN1-202ENST00000381254 FBXO22Q8NEZ5 403 aa6.09□□□□□ -1.44
GEN1-202ENST00000381254 HAUS7Q99871 368 aa6.09□□□□□ -1.44
GEN1-202ENST00000381254 XPNPEP3Q9NQH7 507 aa6.09□□□□□ -1.44
GEN1-202ENST00000381254 SAP30BPQ9UHR5 308 aaKnown RBP6.09□□□□□ -1.44
GEN1-202ENST00000381254 MED23Q9ULK4 1368 aa6.08□□□□□ -1.44
GEN1-202ENST00000381254 PPLO60437 1756 aa6.08□□□□□ -1.44
GEN1-202ENST00000381254 BCRP11274 1271 aa6.08□□□□□ -1.44
GEN1-202ENST00000381254 TRPC3Q13507 836 aa6.08□□□□□ -1.44
GEN1-202ENST00000381254 CCDC122Q5T0U0 273 aa6.08□□□□□ -1.44
GEN1-202ENST00000381254 CDAN1Q8IWY9 1227 aa6.08□□□□□ -1.44
GEN1-202ENST00000381254 DIS3L2Q8IYB7 885 aaKnown RBP6.08□□□□□ -1.44
GEN1-202ENST00000381254 ENGASEQ8NFI3 743 aa6.08□□□□□ -1.44
GEN1-202ENST00000381254 CFAP57Q96MR6 1250 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms