RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 EPHA10Q5JZY3 1008 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 ALS2CLQ60I27 953 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 RNF10Q8N5U6 811 aaKnown RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 RAB3IPQ96QF0 476 aaPredicted RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 THAP9Q9H5L6 903 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 GREM2Q9H772 168 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 SAMSN1Q9NSI8 373 aaKnown RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 PARP3Q9Y6F1 533 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 WDR19Q8NEZ3 1342 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 M0R2C6 588 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 EHHADHQ08426 723 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 EXOC3L4Q17RC7 722 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 RC3H1Q5TC82 1133 aaKnown RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 PHLDB2Q86SQ0 1253 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 SLC51AQ86UW1 340 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 ZNF579Q8NAF0 562 aaKnown RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 CCDC97Q96F63 343 aaPredicted RBP9.19□□□□□ -0.94
VPS36-201ENST00000378060 PGBD1Q96JS3 809 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 MTA3Q9BTC8 594 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 PCDHA4Q9UN74 947 aa9.19□□□□□ -0.94
VPS36-201ENST00000378060 I3L4J1 428 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 PTPREP23469 700 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 GYG1P46976 350 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 CASP8Q14790 479 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 R3HDM1Q15032 1099 aaKnown RBP9.18□□□□□ -0.94
VPS36-201ENST00000378060 SLC15A2Q16348 729 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 CHURC1Q8WUH1 139 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 LARP4BQ92615 738 aaKnown RBP9.18□□□□□ -0.94
VPS36-201ENST00000378060 USP42Q9H9J4 1324 aaKnown RBP9.18□□□□□ -0.94
VPS36-201ENST00000378060 hCG_1984214I3L0E3 225 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 GAS7O60861 476 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 ATP1A3P13637 1013 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 GCFC2P16383 781 aaKnown RBP9.18□□□□□ -0.94
VPS36-201ENST00000378060 ITIH3Q06033 890 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 TSGA10IPQ3SY00 556 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 C10orf76Q5T2E6 689 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 SUSD4Q5VX71 490 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 ANKRD13CQ8N6S4 541 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 ZNF713Q8N859 430 aaPredicted RBP9.18□□□□□ -0.94
VPS36-201ENST00000378060 RAB3IL1Q8TBN0 382 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 ENC1O14682 589 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 GYS1P13807 737 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 HSPA6P17066 643 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 LMNB1P20700 586 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 ABCB4P21439 1286 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 CHRNDQ07001 517 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 RESP18Q5W5W9 173 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 EMBQ6PCB8 327 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 FMR1NBQ8N0W7 255 aaPredicted RBP9.18□□□□□ -0.94
VPS36-201ENST00000378060 PPP1R12CQ9BZL4 782 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 TAF1P21675 1872 aa9.18□□□□□ -0.94
VPS36-201ENST00000378060 A0A087WWV3 80 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 NOL3O60936 208 aaKnown RBP9.17□□□□□ -0.94
VPS36-201ENST00000378060 HEXIM1O94992 359 aaKnown RBP9.17□□□□□ -0.94
VPS36-201ENST00000378060 CFBP00751 764 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 RASSF7Q02833 373 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 SEPT2Q15019 361 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 DPH6Q7L8W6 267 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 GPIHBP1Q8IV16 184 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 GABPB2Q8TAK5 448 aaPredicted RBP9.17□□□□□ -0.94
VPS36-201ENST00000378060 GPKOWQ92917 476 aaPredicted RBP eCLIP9.17□□□□□ -0.945e-7■■■□□ 17.4
VPS36-201ENST00000378060 KIFC2Q96AC6 838 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 KAZALD1Q96I82 304 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 ZSWIM5Q9P217 1185 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 PASKQ96RG2 1323 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 MFAP3LO75121 409 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 STK10O94804 968 aaKnown RBP9.17□□□□□ -0.94
VPS36-201ENST00000378060 SLC8A3P57103 927 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 NR5A1Q13285 461 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 NLRP10Q86W26 655 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 TPH2Q8IWU9 490 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 CDAN1Q8IWY9 1227 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 FAM178BQ8IXR5 827 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 WHAMMQ8TF30 809 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 MYCBPQ99417 103 aaPredicted RBP9.17□□□□□ -0.94
VPS36-201ENST00000378060 PKD2L1Q9P0L9 805 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 DDX25Q9UHL0 483 aaKnown RBP9.17□□□□□ -0.94
VPS36-201ENST00000378060 NARFQ9UHQ1 456 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 STK36Q9NRP7 1315 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 SOWAHDA6NJG2 315 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 MAN1A1P33908 653 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 KCNJ6P48051 423 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 PSMD2Q13200 908 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 AOC3Q16853 763 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 GPATCH4Q5T3I0 446 aaKnown RBP9.17□□□□□ -0.94
VPS36-201ENST00000378060 PHLDB3Q6NSJ2 640 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 SDCCAG8Q86SQ7 713 aaPredicted RBP9.17□□□□□ -0.94
VPS36-201ENST00000378060 PBKQ96KB5 322 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 DPH5Q9H2P9 285 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 BCAP29Q9UHQ4 241 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 COL4A1P02462 1669 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 H7C1W4 665 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 PGRMC1O00264 195 aaKnown RBP9.17□□□□□ -0.94
VPS36-201ENST00000378060 SUN1O94901 812 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 PHBP35232 272 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 RCAN1P53805 252 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 SH3BGRP55822 239 aaPredicted RBP9.17□□□□□ -0.94
VPS36-201ENST00000378060 YWHAEP62258 255 aaKnown RBP9.17□□□□□ -0.94
VPS36-201ENST00000378060 GOLGA8FQ08AF8 430 aa9.17□□□□□ -0.94
VPS36-201ENST00000378060 GOLGA8DPQ0D2H9 430 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms