RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ELF2Q15723 593 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 RYBPQ8N488 228 aaPredicted RBP14.87□□□□□ -0.03
GPC6-201ENST00000377047 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.87□□□□□ -0.03
GPC6-201ENST00000377047 P3H4Q92791 437 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.87□□□□□ -0.03
GPC6-201ENST00000377047 PSMD6Q15008 389 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 SKA2Q8WVK7 121 aaPredicted RBP14.87□□□□□ -0.03
GPC6-201ENST00000377047 H7C0C1 242 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 PHBP35232 272 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 ATP5OP48047 213 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 GUCY2FP51841 1108 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 BPIFB4P59827 614 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 BFSP1Q12934 665 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 RNF207Q6ZRF8 634 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 FAM186BQ8IYM0 893 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 FAM149B1Q96BN6 582 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 RNF181Q9P0P0 153 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 TTBK2Q6IQ55 1244 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 TMEM179Q6ZVK1 233 aa14.87□□□□□ -0.03
GPC6-201ENST00000377047 PNMA6FA0A0J9YX94 578 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 PPP6R2O75170 966 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 SRGAP2CP0DJJ0 459 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 XPAP23025 273 aaPredicted RBP14.86□□□□□ -0.03
GPC6-201ENST00000377047 SF3A3Q12874 501 aaKnown RBP eCLIP14.86□□□□□ -0.03
GPC6-201ENST00000377047 NEDD9Q14511 834 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 CCDC62Q6P9F0 684 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 RABEP2Q9H5N1 569 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 TDRD3Q9H7E2 651 aaKnown RBP14.86□□□□□ -0.03
GPC6-201ENST00000377047 ABCC12Q96J65 1359 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 ASNSP08243 561 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 H2AFZP0C0S5 128 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 SAT1P21673 171 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 H2AFVQ71UI9 128 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 RFX6Q8HWS3 928 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 NSUN7Q8NE18 718 aaKnown RBP14.86□□□□□ -0.03
GPC6-201ENST00000377047 DDX41Q9UJV9 622 aaKnown RBP14.86□□□□□ -0.03
GPC6-201ENST00000377047 HYOU1Q9Y4L1 999 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 COPB1P53618 953 aaKnown RBP14.86□□□□□ -0.03
GPC6-201ENST00000377047 SYNE4Q8N205 404 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 MMP1P03956 469 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 RBM6P78332 1123 aaKnown RBP14.86□□□□□ -0.03
GPC6-201ENST00000377047 PRPSAP1Q14558 356 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 C7orf31Q8N865 590 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 ANKRD42Q8N9B4 389 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 SCYL1Q96KG9 808 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 CCDC68Q9H2F9 335 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 KDM6BO15054 1643 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 PFDN6O15212 129 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 PPFIBP2Q8ND30 876 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 WRNIP1Q96S55 665 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 NXF1Q9UBU9 619 aaKnown RBP14.86□□□□□ -0.03
GPC6-201ENST00000377047 SPATA31E1Q6ZUB1 1445 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 NR5A1Q13285 461 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 KRT71Q3SY84 523 aa14.86□□□□□ -0.03
GPC6-201ENST00000377047 AFPP02771 609 aaKnown RBP14.85□□□□□ -0.03
GPC6-201ENST00000377047 TSTA3Q13630 321 aaPredicted RBP14.85□□□□□ -0.03
GPC6-201ENST00000377047 SLC39A14Q15043 492 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 RILPQ96NA2 401 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 TUBGCP2Q9BSJ2 902 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 TMEM206Q9H813 350 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 ZHX2Q9Y6X8 837 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 PRDM15P57071 1507 aaPredicted RBP14.85□□□□□ -0.03
GPC6-201ENST00000377047 MYO3BQ8WXR4 1341 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 ABCC3O15438 1527 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 MUM1L1Q5H9M0 696 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 PKNOX2Q96KN3 472 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 NLRP4Q96MN2 994 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 FAM49AQ9H0Q0 323 aaPredicted RBP14.85□□□□□ -0.03
GPC6-201ENST00000377047 H7C1W4 665 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 NDUFAB1O14561 156 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 MCAMP43121 646 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 FAM83BQ5T0W9 1011 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 SMYD4Q8IYR2 804 aaPredicted RBP14.85□□□□□ -0.03
GPC6-201ENST00000377047 ARHGEF1Q92888 912 aaKnown RBP14.85□□□□□ -0.03
GPC6-201ENST00000377047 DPH5Q9H2P9 285 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 ZNF148Q9UQR1 794 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 PRPF3O43395 683 aaKnown RBP14.85□□□□□ -0.03
GPC6-201ENST00000377047 MESDQ14696 234 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 MAP7D3Q8IWC1 876 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 GDAP1L1Q96MZ0 367 aa14.85□□□□□ -0.03
GPC6-201ENST00000377047 ESYT2A0FGR8 921 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 EN1Q05925 392 aaPredicted RBP14.84□□□□□ -0.03
GPC6-201ENST00000377047 PKP1Q13835 747 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 CTTNQ14247 550 aaKnown RBP14.84□□□□□ -0.03
GPC6-201ENST00000377047 RPS6KA2Q15349 733 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 SLC38A10Q9HBR0 1119 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 MINPP1Q9UNW1 487 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 DDIT3P35638 169 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 ATP11AP98196 1134 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 MCUR1Q96AQ8 359 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 NOC2LQ9Y3T9 749 aaKnown RBP14.84□□□□□ -0.03
GPC6-201ENST00000377047 VSIG1Q86XK7 387 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 ARHGEF2Q92974 986 aaKnown RBP14.84□□□□□ -0.03
GPC6-201ENST00000377047 PSDA5PKW4 1024 aaPredicted RBP14.84□□□□□ -0.03
GPC6-201ENST00000377047 LMNB1P20700 586 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 P2RX5Q93086 422 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 MAD1L1Q9Y6D9 718 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 GOLGA8SH3BPF8 625 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 LRRN2O75325 713 aa14.84□□□□□ -0.03
GPC6-201ENST00000377047 CYP2D6P10635 497 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms