RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 NUDT12Q9BQG2 462 aa16.15■□□□□ 0.18
MSH5-201ENST00000375703 LRRC27Q9C0I9 530 aa16.15■□□□□ 0.18
MSH5-201ENST00000375703 FAM204AQ9H8W3 233 aa16.15■□□□□ 0.18
MSH5-201ENST00000375703 MLXIPQ9HAP2 919 aa16.15■□□□□ 0.18
MSH5-201ENST00000375703 NAV1Q8NEY1 1877 aa16.15■□□□□ 0.18
MSH5-201ENST00000375703 RNF40O75150 1001 aa16.15■□□□□ 0.18
MSH5-201ENST00000375703 MOCS3O95396 460 aa16.15■□□□□ 0.18
MSH5-201ENST00000375703 PSMD2Q13200 908 aa16.15■□□□□ 0.18
MSH5-201ENST00000375703 CREG2Q8IUH2 290 aa16.15■□□□□ 0.18
MSH5-201ENST00000375703 GOLGA6L1Q8N7Z2 621 aa16.15■□□□□ 0.18
MSH5-201ENST00000375703 MTMR4Q9NYA4 1195 aa16.15■□□□□ 0.18
MSH5-201ENST00000375703 GGA1Q9UJY5 639 aa16.15■□□□□ 0.18
MSH5-201ENST00000375703 CAPN6Q9Y6Q1 641 aa16.15■□□□□ 0.18
MSH5-201ENST00000375703 ABCB11O95342 1321 aa16.15■□□□□ 0.18
MSH5-201ENST00000375703 LRRC53A6NM62 1247 aa16.14■□□□□ 0.17
MSH5-201ENST00000375703 LCA5LO95447 670 aa16.14■□□□□ 0.17
MSH5-201ENST00000375703 ERCC3P19447 782 aa16.14■□□□□ 0.17
MSH5-201ENST00000375703 LRRC41Q15345 812 aa16.14■□□□□ 0.17
MSH5-201ENST00000375703 DRC1Q96MC2 740 aa16.14■□□□□ 0.17
MSH5-201ENST00000375703 TSG101Q99816 390 aa16.14■□□□□ 0.17
MSH5-201ENST00000375703 GPCPD1Q9NPB8 672 aa16.14■□□□□ 0.17
MSH5-201ENST00000375703 MYH1P12882 1939 aa16.14■□□□□ 0.17
MSH5-201ENST00000375703 PRLRP16471 622 aa16.14■□□□□ 0.17
MSH5-201ENST00000375703 MAGEA1P43355 309 aa16.14■□□□□ 0.17
MSH5-201ENST00000375703 ASPRV1Q53RT3 343 aa16.14■□□□□ 0.17
MSH5-201ENST00000375703 RIC8AQ9NPQ8 531 aa16.14■□□□□ 0.17
MSH5-201ENST00000375703 MYBL2P10244 700 aa16.13■□□□□ 0.17
MSH5-201ENST00000375703 TNNI2P48788 182 aa16.13■□□□□ 0.17
MSH5-201ENST00000375703 CACNA2D4Q7Z3S7 1137 aa16.13■□□□□ 0.17
MSH5-201ENST00000375703 KCNK18Q7Z418 384 aa16.13■□□□□ 0.17
MSH5-201ENST00000375703 GPIHBP1Q8IV16 184 aa16.13■□□□□ 0.17
MSH5-201ENST00000375703 LRRC47Q8N1G4 583 aaKnown RBP16.13■□□□□ 0.17
MSH5-201ENST00000375703 CRACR2AQ9BSW2 395 aa16.13■□□□□ 0.17
MSH5-201ENST00000375703 TANGO6Q9C0B7 1094 aa16.13■□□□□ 0.17
MSH5-201ENST00000375703 IVLP07476 585 aa16.13■□□□□ 0.17
MSH5-201ENST00000375703 EIF6P56537 245 aaKnown RBP16.13■□□□□ 0.17
MSH5-201ENST00000375703 GSPT2Q8IYD1 628 aaKnown RBP16.13■□□□□ 0.17
MSH5-201ENST00000375703 MMGT1Q8N4V1 131 aa16.13■□□□□ 0.17
MSH5-201ENST00000375703 ALS2CR12Q96Q35 445 aa16.13■□□□□ 0.17
MSH5-201ENST00000375703 HINFPQ9BQA5 517 aa16.13■□□□□ 0.17
MSH5-201ENST00000375703 SELENOOQ9BVL4 669 aa16.13■□□□□ 0.17
MSH5-201ENST00000375703 MARCH6O60337 910 aa16.12■□□□□ 0.17
MSH5-201ENST00000375703 HOXA7P31268 230 aaPredicted RBP16.12■□□□□ 0.17
MSH5-201ENST00000375703 ATP2B2Q01814 1243 aa16.12■□□□□ 0.17
MSH5-201ENST00000375703 FAM182BQ5T319 152 aa16.12■□□□□ 0.17
MSH5-201ENST00000375703 LRRC55Q6ZSA7 311 aa16.12■□□□□ 0.17
MSH5-201ENST00000375703 GLIS3Q8NEA6 775 aa16.12■□□□□ 0.17
MSH5-201ENST00000375703 BAP1Q92560 729 aa16.12■□□□□ 0.17
MSH5-201ENST00000375703 TNRC6CQ9HCJ0 1690 aaKnown RBP16.12■□□□□ 0.17
MSH5-201ENST00000375703 PICALMQ13492 652 aa16.12■□□□□ 0.17
MSH5-201ENST00000375703 TMEM119Q4V9L6 283 aa16.12■□□□□ 0.17
MSH5-201ENST00000375703 PPP4R3AQ6IN85 833 aa16.12■□□□□ 0.17
MSH5-201ENST00000375703 MYOCDQ8IZQ8 938 aa16.12■□□□□ 0.17
MSH5-201ENST00000375703 NGLY1Q96IV0 654 aa16.12■□□□□ 0.17
MSH5-201ENST00000375703 OSBPL9Q96SU4 736 aa16.12■□□□□ 0.17
MSH5-201ENST00000375703 DDX60LQ5H9U9 1706 aaKnown RBP16.12■□□□□ 0.17
MSH5-201ENST00000375703 SBF2Q86WG5 1849 aa16.12■□□□□ 0.17
MSH5-201ENST00000375703 PNMA6FA0A0J9YX94 578 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 VGLL3A8MV65 326 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 RPS6KA5O75582 802 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 PRPF6O94906 941 aaKnown RBP16.11■□□□□ 0.17
MSH5-201ENST00000375703 TCP1P17987 556 aaKnown RBP16.11■□□□□ 0.17
MSH5-201ENST00000375703 GGCXP38435 758 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 EHHADHQ08426 723 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 VPS72Q15906 364 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 ECM1Q16610 540 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 UBE2SQ16763 222 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 PRR5LQ6MZQ0 368 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 PDXDC1Q6P996 788 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 CCDC155Q8N6L0 562 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 SPATA4Q8NEY3 305 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 AFAP1L1Q8TED9 768 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 TBC1D22AQ8WUA7 517 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 LRRC1Q9BTT6 524 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 EDEM3Q9BZQ6 932 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 JMJD4Q9H9V9 463 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 GAKO14976 1311 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 TRAF5O00463 557 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 AKR1B1P15121 316 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 FKBP3Q00688 224 aaKnown RBP16.11■□□□□ 0.17
MSH5-201ENST00000375703 ITIH3Q06033 890 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 KCNMA1Q12791 1236 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 DPP8Q6V1X1 898 aaPredicted RBP16.11■□□□□ 0.17
MSH5-201ENST00000375703 ZNF572Q7Z3I7 529 aaPredicted RBP16.11■□□□□ 0.17
MSH5-201ENST00000375703 PROM2Q8N271 834 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 ANKRD13CQ8N6S4 541 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 RIN2Q8WYP3 895 aaPredicted RBP16.11■□□□□ 0.17
MSH5-201ENST00000375703 DDX25Q9UHL0 483 aaKnown RBP16.11■□□□□ 0.17
MSH5-201ENST00000375703 FAM184BQ9ULE4 1060 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 HYOU1Q9Y4L1 999 aa16.11■□□□□ 0.17
MSH5-201ENST00000375703 ZC3H4Q9UPT8 1303 aaKnown RBP16.11■□□□□ 0.17
MSH5-201ENST00000375703 SNHG28P0DPA3 235 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 CXCR5P32302 372 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 MATR3P43243 847 aaKnown RBP eCLIP16.1■□□□□ 0.17
MSH5-201ENST00000375703 RASSF7Q02833 373 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 GFPT1Q06210 699 aaPredicted RBP16.1■□□□□ 0.17
MSH5-201ENST00000375703 CCDC181Q5TID7 509 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 NFRKBQ6P4R8 1299 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 FAM196AQ6ZSG2 479 aa16.1■□□□□ 0.17
MSH5-201ENST00000375703 PAXIP1Q6ZW49 1069 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms