RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 EMILIN3Q9NT22 766 aa19.77■□□□□ 0.76
PTPDC1-202ENST00000375360 UBE2Q2LH0YL09 131 aa19.77■□□□□ 0.75
PTPDC1-202ENST00000375360 RASA3Q14644 834 aa19.77■□□□□ 0.75
PTPDC1-202ENST00000375360 EXOC3L4Q17RC7 722 aa19.77■□□□□ 0.75
PTPDC1-202ENST00000375360 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.77■□□□□ 0.75
PTPDC1-202ENST00000375360 ATP6V0A1Q93050 837 aa19.77■□□□□ 0.75
PTPDC1-202ENST00000375360 MTMR4Q9NYA4 1195 aa19.77■□□□□ 0.75
PTPDC1-202ENST00000375360 MTUS1Q9ULD2 1270 aa19.77■□□□□ 0.75
PTPDC1-202ENST00000375360 IKBKGQ9Y6K9 419 aa19.77■□□□□ 0.75
PTPDC1-202ENST00000375360 POTEDQ86YR6 584 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 SLC7A3Q8WY07 619 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 FERMT1Q9BQL6 677 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 BAZ2BQ9UIF8 2168 aaKnown RBP19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 WTIPA6NIX2 430 aaPredicted RBP19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 ARHGAP4P98171 946 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 RBL2Q08999 1139 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 C8orf74Q6P047 294 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 TMED8Q6PL24 325 aaPredicted RBP19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 SHC4Q6S5L8 630 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 PEX26Q7Z412 305 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 CCDC51Q96ER9 411 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 RMDN3Q96TC7 470 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 PRPF6O94906 941 aaKnown RBP19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 FDPSP14324 419 aaKnown RBP19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 MTERF2Q49AM1 385 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 SEL1L2Q5TEA6 688 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 RNF207Q6ZRF8 634 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 ZBTB8OSQ8IWT0 167 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 CCDC155Q8N6L0 562 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 DCAF4Q8WV16 495 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 SH3GLB2Q9NR46 395 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 PNMA2Q9UL42 364 aa19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 COL5A2P05997 1499 aaPredicted RBP19.76■□□□□ 0.75
PTPDC1-202ENST00000375360 POLLQ9UGP5 575 aa19.75■□□□□ 0.75
PTPDC1-202ENST00000375360 ZNRF3Q9ULT6 936 aa19.75■□□□□ 0.75
PTPDC1-202ENST00000375360 SLC10A4Q96EP9 437 aa19.75■□□□□ 0.75
PTPDC1-202ENST00000375360 METTL14Q9HCE5 456 aaKnown RBP19.75■□□□□ 0.75
PTPDC1-202ENST00000375360 NRBP2Q9NSY0 501 aa19.75■□□□□ 0.75
PTPDC1-202ENST00000375360 E9PMD0 336 aa19.75■□□□□ 0.75
PTPDC1-202ENST00000375360 INO80B-WBP1J3KQ70 363 aa19.75■□□□□ 0.75
PTPDC1-202ENST00000375360 CCNE1P24864 410 aa19.75■□□□□ 0.75
PTPDC1-202ENST00000375360 RPS6KA1Q15418 735 aa19.75■□□□□ 0.75
PTPDC1-202ENST00000375360 RNF187Q5TA31 235 aaPredicted RBP19.75■□□□□ 0.75
PTPDC1-202ENST00000375360 DDX12PQ92771 950 aa19.75■□□□□ 0.75
PTPDC1-202ENST00000375360 PAIP2Q9BPZ3 127 aaKnown RBP19.75■□□□□ 0.75
PTPDC1-202ENST00000375360 INO80BQ9C086 356 aaPredicted RBP19.75■□□□□ 0.75
PTPDC1-202ENST00000375360 CTDNEP1O95476 244 aa19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 IREB2P48200 963 aaKnown RBP19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 SLC15A2Q16348 729 aa19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 TRIM49BA6NDI0 452 aa19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 PRR29P0C7W0 189 aa19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 RASA1P20936 1047 aa19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 RCAN1P53805 252 aa19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 CALCOCO2Q13137 446 aa19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 ERCC6LQ2NKX8 1250 aa19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 Q3C1V9 767 aa19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 USP49Q70CQ1 688 aa19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 APBB1IPQ7Z5R6 666 aaPredicted RBP19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 PPP1R16BQ96T49 567 aa19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 NUCKS1Q9H1E3 243 aaKnown RBP19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 ADD3Q9UEY8 706 aaKnown RBP19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 ZNF215Q9UL58 517 aaPredicted RBP19.74■□□□□ 0.75
PTPDC1-202ENST00000375360 SALL3Q9BXA9 1300 aa19.73■□□□□ 0.75
PTPDC1-202ENST00000375360 DPEP1P16444 411 aa19.73■□□□□ 0.75
PTPDC1-202ENST00000375360 ARMC9Q7Z3E5 817 aa19.73■□□□□ 0.75
PTPDC1-202ENST00000375360 MYRIPQ8NFW9 859 aa19.73■□□□□ 0.75
PTPDC1-202ENST00000375360 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.73■□□□□ 0.75
PTPDC1-202ENST00000375360 FAM186BQ8IYM0 893 aa19.73■□□□□ 0.75
PTPDC1-202ENST00000375360 AGTPBP1Q9UPW5 1226 aa19.73■□□□□ 0.75
PTPDC1-202ENST00000375360 POTEB3A0JP26 581 aa19.73■□□□□ 0.75
PTPDC1-202ENST00000375360 POTECB2RU33 542 aa19.73■□□□□ 0.75
PTPDC1-202ENST00000375360 SBK1Q52WX2 424 aa19.73■□□□□ 0.75
PTPDC1-202ENST00000375360 PDXDC2PQ6P474 469 aa19.73■□□□□ 0.75
PTPDC1-202ENST00000375360 POTEBQ6S5H4 581 aa19.73■□□□□ 0.75
PTPDC1-202ENST00000375360 PSMD1Q99460 953 aa19.73■□□□□ 0.75
PTPDC1-202ENST00000375360 CNOT7Q9UIV1 285 aaKnown RBP19.73■□□□□ 0.75
PTPDC1-202ENST00000375360 A0A1W2PRG0 241 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 LRRN2O75325 713 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 EEF1GP26641 437 aaKnown RBP19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 MARK3P27448 753 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 NT5C2P49902 561 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 LIN9Q5TKA1 542 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 SNRNP48Q6IEG0 339 aaKnown RBP19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 GOLGA5Q8TBA6 731 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 BBXQ8WY36 941 aaPredicted RBP19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 SLC5A4Q9NY91 659 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 SAR1BQ9Y6B6 198 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 EZRP15311 586 aaKnown RBP19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 STAT3P40763 770 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 ZRSR2Q15696 482 aaKnown RBP19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 KCNG1Q9UIX4 513 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 DAAM2Q86T65 1068 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 MICALL2Q8IY33 904 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 PARVGQ9HBI0 331 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 KMT5AQ9NQR1 393 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 CCNA1P78396 465 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 ZHX1Q9UKY1 873 aaPredicted RBP19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 SUGT1Q9Y2Z0 365 aa19.72■□□□□ 0.75
PTPDC1-202ENST00000375360 ENC1O14682 589 aa19.71■□□□□ 0.75
PTPDC1-202ENST00000375360 ZNF500O60304 480 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms