RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 TSGA10Q9BZW7 698 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 UBA5Q9GZZ9 404 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 GBP3Q9H0R5 595 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 MRPL44Q9H9J2 332 aaKnown RBP13.64□□□□□ -0.23
UBR4-203ENST00000375225 MAPK8IP1Q9UQF2 711 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 PCDHAC2Q9Y5I4 1007 aa13.64□□□□□ -0.23
UBR4-203ENST00000375225 FZD9O00144 591 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 ZBTB5O15062 677 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 ERLIN1O75477 346 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 AKR1B1P15121 316 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 TRIM21P19474 475 aaKnown RBP13.63□□□□□ -0.23
UBR4-203ENST00000375225 LMNB1P20700 586 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 CLCN6P51797 869 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 CACNB3P54284 484 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 CHMP4BP1P59074 171 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 ZBED6P86452 979 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 LRRC63Q05C16 580 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 TBC1D8BQ0IIM8 1120 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 TCP10Q12799 353 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 TRAF1Q13077 416 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 MTF1Q14872 753 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 BRD3Q15059 726 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 TEX35Q5T0J7 233 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 POTEDQ86YR6 584 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 TEX2Q8IWB9 1127 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 LRRC47Q8N1G4 583 aaKnown RBP13.63□□□□□ -0.23
UBR4-203ENST00000375225 CNOT6LQ96LI5 555 aaKnown RBP13.63□□□□□ -0.23
UBR4-203ENST00000375225 PLIN2Q99541 437 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 NOC4LQ9BVI4 516 aaKnown RBP13.63□□□□□ -0.23
UBR4-203ENST00000375225 GPCPD1Q9NPB8 672 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 PI4KBQ9UBF8 816 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 FAM198AQ9UFP1 575 aa13.63□□□□□ -0.23
UBR4-203ENST00000375225 EPN1Q9Y6I3 576 aaPredicted RBP13.63□□□□□ -0.23
UBR4-203ENST00000375225 SBF1O95248 1867 aa13.62□□□□□ -0.23
UBR4-203ENST00000375225 ATRNL1Q5VV63 1379 aa13.62□□□□□ -0.23
UBR4-203ENST00000375225 SIPA1L1O43166 1804 aa13.62□□□□□ -0.23
UBR4-203ENST00000375225 MPHOSPH10O00566 681 aaKnown RBP13.62□□□□□ -0.23
UBR4-203ENST00000375225 KRT86O43790 486 aa13.62□□□□□ -0.23
UBR4-203ENST00000375225 NDUFA10O95299 355 aa13.62□□□□□ -0.23
UBR4-203ENST00000375225 MCM3P25205 808 aa13.62□□□□□ -0.23
UBR4-203ENST00000375225 CDK17Q00537 523 aa13.62□□□□□ -0.23
UBR4-203ENST00000375225 GPS2Q13227 327 aa13.62□□□□□ -0.23
UBR4-203ENST00000375225 SPDYE2Q495Y8 402 aa13.62□□□□□ -0.23
UBR4-203ENST00000375225 RSRC2Q7L4I2 434 aaKnown RBP13.62□□□□□ -0.23
UBR4-203ENST00000375225 CCDC84Q86UT8 332 aaPredicted RBP13.62□□□□□ -0.23
UBR4-203ENST00000375225 GUF1Q8N442 669 aaKnown RBP13.62□□□□□ -0.23
UBR4-203ENST00000375225 ZNF507Q8TCN5 953 aa13.62□□□□□ -0.23
UBR4-203ENST00000375225 SNX29Q8TEQ0 813 aa13.62□□□□□ -0.23
UBR4-203ENST00000375225 RAD54LQ92698 747 aa13.62□□□□□ -0.23
UBR4-203ENST00000375225 SYT17Q9BSW7 474 aa13.62□□□□□ -0.23
UBR4-203ENST00000375225 ARFGAP3Q9NP61 516 aa13.62□□□□□ -0.23
UBR4-203ENST00000375225 ZNF70Q9UC06 446 aaPredicted RBP13.62□□□□□ -0.23
UBR4-203ENST00000375225 DDX25Q9UHL0 483 aaKnown RBP13.62□□□□□ -0.23
UBR4-203ENST00000375225 MYH4Q9Y623 1939 aa13.61□□□□□ -0.23
UBR4-203ENST00000375225 TRIM49BA6NDI0 452 aa13.61□□□□□ -0.23
UBR4-203ENST00000375225 TNNI2P48788 182 aa13.61□□□□□ -0.23
UBR4-203ENST00000375225 FKBP1CQ5VVH2 108 aa13.61□□□□□ -0.23
UBR4-203ENST00000375225 KIAA1328Q86T90 577 aa13.61□□□□□ -0.23
UBR4-203ENST00000375225 IRF2BP1Q8IU81 584 aa13.61□□□□□ -0.23
UBR4-203ENST00000375225 SLFN12Q8IYM2 578 aa13.61□□□□□ -0.23
UBR4-203ENST00000375225 ADGRF4Q8IZF3 695 aa13.61□□□□□ -0.23
UBR4-203ENST00000375225 ERGIC2Q96RQ1 377 aa13.61□□□□□ -0.23
UBR4-203ENST00000375225 PSTPIP2Q9H939 334 aa13.61□□□□□ -0.23
UBR4-203ENST00000375225 MYOZ2Q9NPC6 264 aa13.61□□□□□ -0.23
UBR4-203ENST00000375225 FAM53CQ9NYF3 392 aa13.61□□□□□ -0.23
UBR4-203ENST00000375225 GJA3Q9Y6H8 435 aa13.61□□□□□ -0.23
UBR4-203ENST00000375225 TTC26A0AVF1 554 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 CTAGE15A4D2H0 777 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 CCDC151A5D8V7 595 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 USO1O60763 962 aaKnown RBP13.6□□□□□ -0.23
UBR4-203ENST00000375225 GNA14O95837 355 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 CTAGE8P0CG41 777 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 USP11P51784 963 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 ZNF280AP59817 542 aaPredicted RBP13.6□□□□□ -0.23
UBR4-203ENST00000375225 ERVK-24P63145 666 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 CKAP4Q07065 602 aaKnown RBP13.6□□□□□ -0.23
UBR4-203ENST00000375225 GRB10Q13322 594 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 AP3B2Q13367 1082 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 MEA1Q16626 185 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 TMEM119Q4V9L6 283 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 ANKRD40Q6AI12 368 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 IQCEQ6IPM2 695 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 CENPPQ6IPU0 288 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 MOXD1Q6UVY6 613 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 CTAGE6Q86UF2 777 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 CTAGE4Q8IX94 777 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 CCDC65Q8IXS2 484 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 COA7Q96BR5 231 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 RPGRIP1Q96KN7 1286 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 DUSP9Q99956 384 aaKnown RBP13.6□□□□□ -0.23
UBR4-203ENST00000375225 EDEM3Q9BZQ6 932 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 CPVLQ9H3G5 476 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 KANSL2Q9H9L4 492 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 JMJD4Q9H9V9 463 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 VEZTQ9HBM0 779 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 NYAP2Q9P242 653 aa13.6□□□□□ -0.23
UBR4-203ENST00000375225 GREB1LQ9C091 1923 aaPredicted RBP13.6□□□□□ -0.23
UBR4-203ENST00000375225 CLRN2A0PK11 232 aa13.59□□□□□ -0.23
UBR4-203ENST00000375225 DDTLA6NHG4 134 aaPredicted RBP13.59□□□□□ -0.23
UBR4-203ENST00000375225 B4DLN1 442 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms