RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 PRDM10Q9NQV6 1147 aa20.89■□□□□ 0.94
USP49-202ENST00000373010 REXO2Q9Y3B8 237 aaKnown RBP20.89■□□□□ 0.94
USP49-202ENST00000373010 EPN1Q9Y6I3 576 aaPredicted RBP20.89■□□□□ 0.94
USP49-202ENST00000373010 CLCN6P51797 869 aa20.89■□□□□ 0.93
USP49-202ENST00000373010 RRP1BQ14684 758 aaKnown RBP20.89■□□□□ 0.93
USP49-202ENST00000373010 ZNF772Q68DY9 489 aaPredicted RBP20.89■□□□□ 0.93
USP49-202ENST00000373010 YDJCA8MPS7 323 aa20.88■□□□□ 0.93
USP49-202ENST00000373010 MEIS2O14770 477 aa20.88■□□□□ 0.93
USP49-202ENST00000373010 NPM3O75607 178 aaKnown RBP20.88■□□□□ 0.93
USP49-202ENST00000373010 NDUFA10O95299 355 aa20.88■□□□□ 0.93
USP49-202ENST00000373010 NDUFB10O96000 172 aa20.88■□□□□ 0.93
USP49-202ENST00000373010 PCMTD1Q96MG8 357 aaPredicted RBP20.88■□□□□ 0.93
USP49-202ENST00000373010 TTYH3Q9C0H2 523 aa20.88■□□□□ 0.93
USP49-202ENST00000373010 GH2P01242 217 aa20.88■□□□□ 0.93
USP49-202ENST00000373010 SSBP05455 408 aaKnown RBP eCLIP20.88■□□□□ 0.93
USP49-202ENST00000373010 TRIM21P19474 475 aaKnown RBP20.88■□□□□ 0.93
USP49-202ENST00000373010 USH1GQ495M9 461 aa20.88■□□□□ 0.93
USP49-202ENST00000373010 EHHADHQ08426 723 aa20.87■□□□□ 0.93
USP49-202ENST00000373010 IKQ13123 557 aaPredicted RBP20.87■□□□□ 0.93
USP49-202ENST00000373010 TEX35Q5T0J7 233 aa20.87■□□□□ 0.93
USP49-202ENST00000373010 GUF1Q8N442 669 aaKnown RBP20.87■□□□□ 0.93
USP49-202ENST00000373010 DNAJC19Q96DA6 116 aa20.87■□□□□ 0.93
USP49-202ENST00000373010 GLT8D2Q9H1C3 349 aa20.87■□□□□ 0.93
USP49-202ENST00000373010 TRIM10Q9UDY6 481 aa20.87■□□□□ 0.93
USP49-202ENST00000373010 E9PMD0 336 aa20.87■□□□□ 0.93
USP49-202ENST00000373010 STAT3P40763 770 aa20.87■□□□□ 0.93
USP49-202ENST00000373010 TSR1Q2NL82 804 aaKnown RBP20.87■□□□□ 0.93
USP49-202ENST00000373010 PPIP5K2O43314 1243 aa20.86■□□□□ 0.93
USP49-202ENST00000373010 GMCL1P1Q8NEA9 526 aa20.86■□□□□ 0.93
USP49-202ENST00000373010 NAP1L4Q99733 375 aaKnown RBP20.86■□□□□ 0.93
USP49-202ENST00000373010 LRRC27Q9C0I9 530 aa20.86■□□□□ 0.93
USP49-202ENST00000373010 KCNMB3Q9NPA1 279 aa20.86■□□□□ 0.93
USP49-202ENST00000373010 KIAA1024Q9UPX6 916 aa20.86■□□□□ 0.93
USP49-202ENST00000373010 TNS1Q9HBL0 1735 aaKnown RBP20.86■□□□□ 0.93
USP49-202ENST00000373010 POTEB3A0JP26 581 aa20.86■□□□□ 0.93
USP49-202ENST00000373010 POTECB2RU33 542 aa20.86■□□□□ 0.93
USP49-202ENST00000373010 USP11P51784 963 aa20.86■□□□□ 0.93
USP49-202ENST00000373010 COASYQ13057 564 aa20.86■□□□□ 0.93
USP49-202ENST00000373010 KIF4BQ2VIQ3 1234 aa20.86■□□□□ 0.93
USP49-202ENST00000373010 POTEBQ6S5H4 581 aa20.86■□□□□ 0.93
USP49-202ENST00000373010 RSRC2Q7L4I2 434 aaKnown RBP20.86■□□□□ 0.93
USP49-202ENST00000373010 CSRNP1Q96S65 589 aa20.86■□□□□ 0.93
USP49-202ENST00000373010 AMNQ9BXJ7 453 aa20.86■□□□□ 0.93
USP49-202ENST00000373010 ZSWIM4Q9H7M6 989 aa20.86■□□□□ 0.93
USP49-202ENST00000373010 C21orf2O43822 256 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 ENTPD3O75355 529 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 RBM26Q5T8P6 1007 aaKnown RBP20.85■□□□□ 0.93
USP49-202ENST00000373010 SYDE2Q5VT97 1194 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 FBXO11Q86XK2 927 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 GMCL1Q96IK5 515 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 ERGIC2Q96RQ1 377 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 NUP58Q9BVL2 599 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 TFR2Q9UP52 801 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 ATRNL1Q5VV63 1379 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 A0A1W2PRG0 241 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 ERCC3P19447 782 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 ARHGAP4P98171 946 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 MEA1Q16626 185 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 HYIQ5T013 277 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 FKBP15Q5T1M5 1219 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 SPICE1Q8N0Z3 855 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 PANK4Q9NVE7 773 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 TBC1D7Q9P0N9 293 aa20.85■□□□□ 0.93
USP49-202ENST00000373010 CYP3A7-CYP3A51PA0A087WV96 503 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 NPHP3-ACAD11A0A0J9YXS1 232 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 CTAGE9A4FU28 777 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 TFRCP02786 760 aaKnown RBP20.84■□□□□ 0.93
USP49-202ENST00000373010 CYP3A7P24462 503 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 HERVK_113P62684 666 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 PSMD2Q13200 908 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 VWA3BQ502W6 1294 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 MBOAT7Q96N66 472 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 FGFBP2Q9BYJ0 223 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 NT5C3AQ9H0P0 336 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 KDM3AQ9Y4C1 1321 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 TCP10L2B9ZVM9 353 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 BMP3P12645 472 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 ZBED6P86452 979 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 CACNB1Q02641 598 aaPredicted RBP20.84■□□□□ 0.93
USP49-202ENST00000373010 PRR16Q569H4 304 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 CC2D2BQ6DHV5 1058 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 LRRC55Q6ZSA7 311 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 RETREG2Q8NC44 543 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 CRYGNQ8WXF5 182 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 PUF60Q9UHX1 559 aaKnown RBP20.84■□□□□ 0.93
USP49-202ENST00000373010 CDC23Q9UJX2 597 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 GUCA1BQ9UMX6 200 aa20.84■□□□□ 0.93
USP49-202ENST00000373010 SMCHD1A6NHR9 2005 aa20.83■□□□□ 0.93
USP49-202ENST00000373010 MED24O75448 989 aa20.83■□□□□ 0.93
USP49-202ENST00000373010 PLA2G4BP0C869 781 aa20.83■□□□□ 0.93
USP49-202ENST00000373010 LRRC63Q05C16 580 aa20.83■□□□□ 0.93
USP49-202ENST00000373010 AP3B2Q13367 1082 aa20.83■□□□□ 0.93
USP49-202ENST00000373010 SMAP1Q8IYB5 467 aaPredicted RBP20.83■□□□□ 0.93
USP49-202ENST00000373010 NDST4Q9H3R1 872 aa20.83■□□□□ 0.93
USP49-202ENST00000373010 CLRN2A0PK11 232 aa20.83■□□□□ 0.92
USP49-202ENST00000373010 RAD51AP2Q09MP3 1159 aa20.83■□□□□ 0.92
USP49-202ENST00000373010 SLC15A2Q16348 729 aa20.83■□□□□ 0.92
USP49-202ENST00000373010 MYOCDQ8IZQ8 938 aa20.83■□□□□ 0.92
USP49-202ENST00000373010 NAPGQ99747 312 aaPredicted RBP20.83■□□□□ 0.92
USP49-202ENST00000373010 FAM26FQ5R3K3 315 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms